Trachemys scripta elegans (red-eared slider): 117881373
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Entry
117881373 CDS
T07347
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA helicase A [EC:
5.6.2.6
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117881373 (DHX9)
Enzymes [BR:
tst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117881373 (DHX9)
Spliceosome [BR:
tst03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117881373 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
HA2_N
DEAD
HA2_C
ResIII
Dicer_dimer
AAA_19
AAA_14
nSTAND3
Motif
Other DBs
NCBI-GeneID:
117881373
NCBI-ProteinID:
XP_034634415
LinkDB
All DBs
Position
8:54494018..54536595
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AA seq
1263 aa
AA seq
DB search
MGDVKNFLYAWCGKRKVTPTYEIRAVGNKNRQKFMCEVRVEGFNYIGMGNSTNKKDAQSN
AARDFLNYLVRLNEIKSEEIPALGAGAADAPDGIVPEARGDAGERVSTLGGPLPPHLALK
SETGGGPAAGVGSSGYGGAQWDRGANLKDYYSRKEEQEAQATLESEEVDLNAGLHGNWTL
ENAKARLNQFFQKEKVQGEYKYTQVGPDHNRSFIAEMTIYVKQLGRRIFAREHGSNKKLA
AQSCALSLVRQLYHLGVIEPYTGQTKKKEGETVEPYEVVISPDLENQLNSIIQELSLEVM
PQPEDPSCPVLLNIGKLAHFEPSVRQNQMGVVPWSPPQSNWNPWTSCNIDEGPLAYATPE
QISMDLKNDLMYRLEQDQELQRILQERETLPVKKFETEILDAIHHSPVVVIRGATGCGKT
TQVPQYILDEYIKNGKAAECNIVVTQPRRISAVSVAERVSYERGEEPGQSCGYSVRFESV
LPRPHASVMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLMVVLRDVVEAYPEIR
VILMSATIDTSMFCEYFFNCPIIEVYGRTFPVEEYFLEDCIQMTQFVPPLKDKKRKDKDE
EGGEDDDANCNLICSDEYGPETKRCMAQLNEKETPFELIEALLKYIETLNVPGAVLVFLP
GWNLIYTMQKHLEMNPHFGSHRYRILPLHSQIPRDEQRRVFDPVPSGVTKVILSTNIAET
SITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRAGFCFHLCS
RARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRE
LDALDSNDELTPLGRILAKLPIEPRLGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGK
RLGYVHRNFAGNRFSDHVALLSVFQAWDDARMGGEDAEIRFCEHKRLNMATLRMTWEAKV
QLKDILINSGFPEECLMTQIFNNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGR
NALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVSPLQLLLFASKKVLSD
GEIILVDDWIKLRMSHDAAACVTALRAAMEALVVEVTKDPEIISQLDPVNERMLNVIRQI
SRPSAAGINLMAGNTRFGDGPRPPKMARYDNGGGFRGRGVNQRGSGYRGGGYGGGGYNSY
RGGSGGRGYQGGSGGGYRGGGGYRGSGGGYRGSGGGYRGYQGGGNRGNYGGGYGGQGRGR
GGY
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgtgaagaacttcctgtacgcctggtgcggcaagaggaaggtgacgccgacc
tacgagatccgcgccgtgggcaacaagaaccggcagaagttcatgtgtgaggttcgggtg
gaaggttttaactacattggaatgggcaattccacgaacaagaaagatgcacagagcaat
gctgctagggacttccttaattacttagttcggttgaatgaaatcaagagtgaagaaatt
ccagctttaggggcaggagctgctgatgctccggatggaatagtgcctgaagcaagggga
gatgctggtgaacgtgtttctactctgggcggacctcttcctccacatttggcactgaag
agtgaaacaggtggtggtccggctgctggagttggaagctctggctatggtggggctcag
tgggaccgtggagccaatctgaaggattactattcaaggaaggaggagcaggaggcacag
gctaccttggagtcagaagaagtggacttaaatgctggtcttcatggaaattggaccttg
gagaatgctaaggcgcgtctgaaccagtttttccaaaaggagaaggtccagggagaatat
aaatacactcaagtggggcctgatcacaacaggagctttattgcagaaatgaccatttat
gtcaagcagctgggcagaagaatctttgctcgtgagcatggatcaaacaaaaagctggca
gcacagtcctgtgctctgtccctggtcagacagctctaccatcttggggtcatcgagccc
tacactgggcagacaaagaagaaggaaggagaaacagtagaaccttatgaagtggtgatc
tctcctgatttggaaaatcaactgaatagcatcatacaggagctttctcttgaggtcatg
ccacagcctgaagatccaagctgtccagttttgctcaacattggaaaactggcccatttt
gaaccatctgtgagacagaatcaaatgggagttgtcccatggtcacccccgcagtcaaac
tggaacccttggaccagctgcaatattgatgagggtcctctggcatatgccaccccagaa
cagataagcatggacttgaaaaatgatctcatgtaccgcctggagcaggatcaagagtta
cagaggatcctacaagagagggagacactgcctgtgaagaaatttgagactgaaattctt
gatgcaatccatcacagtcctgttgtcgtcattcgtggtgccactggttgtggcaaaacc
acacaggttccacagtacatcctggatgaatacatcaaaaacggcaaagctgcagaatgc
aacattgtagtaacacaacccaggaggatcagtgcagtttccgtggcagagcgtgtgtcg
tatgagagaggagaagaacctgggcaaagctgtggatacagtgtacgatttgaatctgta
cttccccgcccccatgccagtgtgatgttctgcactgtaggtgtcctcctaagaaaactg
gaggctgggatccgtggaattagtcatgttattgtggatgagatccatgagagagacatt
aatactgacttcctcatggtggtgctgagagacgtagttgaggcatatcctgaaatcaga
gttatccttatgtctgccactattgataccagcatgttctgtgaatacttcttcaattgc
cccatcattgaggtctacggtagaaccttcccagttgaagagtattttctggaagactgt
attcagatgactcagtttgttcctccattaaaggataagaagaggaaagacaaagatgaa
gaaggtggtgaagatgacgatgccaactgtaatcttatatgtagtgatgaatatggtcca
gaaacaaaacgttgtatggcccagttgaacgagaaggaaactccctttgagctcattgag
gccttgctaaagtacatcgagaccctgaatgttccaggagctgtgcttgtcttcttgcct
ggctggaacctgatttacaccatgcaaaagcatctggaaatgaatccacactttggaagc
catcgctatagaattctgcccctgcattcacaaattcctcgagacgaacagcgcagagtg
tttgatccagtgccttctggagtgaccaaggtgattttatccaccaacattgctgagact
agcattaccatcaatgacgttgtctacgttatagactcttgcaaacaaaaggttaagctg
ttcactgctcacaacaatatgacaaactatgccactgtctgggcatcaaaaactaacctt
gagcaacggaaagggcgagctggccgagtgcgggctggattctgtttccatctgtgcagc
agagctcgctttgaaaggcttgaaactcacatgacacctgaaatgttcagaacaccactg
catgaaattgctttgagcatcaaacttctgcgactgggagggattggacaattcttggcc
aaagcgatagaaccaccacctttggatgcagtgattgaagcagagcacacactcagagag
ctggatgccctggactccaatgatgagttgacacctcttgggagaatccttgctaaactc
cccattgaacctcgtctgggcaagatgatgataatgggctgcattttctatgtaggagat
gctgtgtgtaccatctctgctgccacctgcttccctgagcctttcatcagtgagggtaaa
cggctgggttacgtccataggaattttgcggggaacaggttttcagatcatgtagccttg
ctttcagtcttccaggcctgggatgatgcaagaatgggcggtgaagatgcagaaataaga
ttctgtgaacacaaaaggctcaacatggctacactcaggatgacttgggaagccaaagtc
cagcttaaagatattcttatcaattctggctttccggaagagtgtttgatgactcagata
tttaacaacactggaccagataacaatctagatgttgtgatctccctgcttgcttttggt
gtataccctaacgtctgctatcacaaggagaagaggaaaattcttaccactgaggggcgc
aatgcacttatccacaagtcatccgtcaactgtcctttcagcagccaggacatgaagtat
ccatctcctttctttgtttttggtgaaaagatccgaacacgagctatctctgccaaagga
atgactttggtgagcccgctgcagctgcttctgtttgcctcaaagaaagtcttatctgat
ggagagatcattctggtggatgactggattaaattgcggatgtctcatgatgcagctgcc
tgtgtcactgccctacgtgcagcaatggaagctcttgttgttgaagtaactaaagatcct
gaaatcattagccagctggacccagtgaatgagcgaatgctgaatgtgatccgccaaatc
tccaggccttcagcggctggcatcaacctcatggcaggcaacacaaggtttggagatggt
cctcgtccacccaaaatggctcgatatgacaatggaggtggattcagaggacggggagtt
aaccagcgtggctctggctacagaggtggaggctatggtggtggaggctataactcgtac
cgaggtggctctggaggaagaggataccaaggtggttctgggggaggttatagaggtggg
gggggatatagagggtctgggggagggtatcgaggctcgggtggaggatatagagggtac
caaggtggtgggaatagaggtaattatggaggtgggtatgggggccaaggaagggggcgt
ggtggttattga
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integrated database retrieval system
