Trachemys scripta elegans (red-eared slider): 117881746
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Entry
117881746 CDS
T07347
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117881746 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117881746 (PRPF38A)
Spliceosome [BR:
tst03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117881746 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
117881746 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
117881746
NCBI-ProteinID:
XP_034635278
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All DBs
Position
8:complement(98346029..98351274)
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AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLETR
VSALEEDMDDVESSEEEEEEDEKLERAPSPDHRRRGYRDLDKPRRSPALRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggacggtgaaggatgcgcacagcatccacggcaccaacccgcagtacctg
gtggagaagatcatccgcacccgcatctatgagtccaagtactggaaggaggagtgtttc
ggcctcacggctgaactggtggtggataaagccatggaactgagatatgttggtggcgtt
tatggtggaaacatcaagcctacaccattcctctgcttgaccctgaaaatgctgcagatc
cagcctgaaaaggacatcattgttgagtttataaagaatgaggatttcaaatatgtcaga
atgcttggagcattgtatatgagattgacaggcactgccattgactgctacaagtacctt
gaaccactgtacaatgactaccgaaaaataaaaagtcaaaacagaaatggggaatttgag
ctgatgcatgtggatgagtttattgatgaacttcttcacagtgaacgtgtatgtgatatc
attttgcctcgattgcagaaacgttatgttctggaagaagctgaacaattggagactcgg
gttagtgctttagaagaagatatggatgatgtagagtccagtgaggaggaggaggaggaa
gatgagaagctggagagggcaccttcccccgatcatcgcagaagaggctacagagaccta
gataagccccgcagatctccagctctacgatacaggaggagtcgaagcaggtctccaaga
aggcgaagcagatctccaaagaggagaagcccctcacctcgtcgggagagacatcgcagc
aaaagcccaaggcgacaccggagcaggtccagggagaggcgccacagatcaagatctaaa
tctccagggcatcatcgtagccaccgacacagaagccattctaagtcacctgaaagatct
aagaaaagccataagaagagtcggcgagggaatgaataa
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integrated database retrieval system
