Trachemys scripta elegans (red-eared slider): 117885010
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Entry
117885010 CDS
T07347
Symbol
GAD1
Name
(RefSeq) glutamate decarboxylase 1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00250
Alanine, aspartate and glutamate metabolism
tst00410
beta-Alanine metabolism
tst00430
Taurine and hypotaurine metabolism
tst00650
Butanoate metabolism
tst01100
Metabolic pathways
Module
tst_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117885010 (GAD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
117885010 (GAD1)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
117885010 (GAD1)
00430 Taurine and hypotaurine metabolism
117885010 (GAD1)
Enzymes [BR:
tst01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
117885010 (GAD1)
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
DegT_DnrJ_EryC1
OKR_DC_1
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
117885010
NCBI-ProteinID:
XP_034641966
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All DBs
Position
11:37117557..37155896
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AA seq
590 aa
AA seq
DB search
MASSAPSSSNANQDSNPTNLRPTTYDNWCDVAHGCTRKIGLKICGFLQRNNSLEDKSRIV
SSLKERQSSKNLLACENSEREARFRRAETDFSNLFARDLLPAKNGEEQTMQFLLEVVDIL
LNYVKKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDNPESLEQILVDCRDTLKYGVRTGH
PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLRKMREIIGWSNKDG
DGIFSPGGAISNMYSVMAARYKYFPEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGFG
TENVILIKCNERGKIIPADLEAKILEAKQKGHVPLYVNATAGTTVYGAFDPIEEIADICE
KYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILIREKGIL
QGCNQMCAGYLFQQDKQYDISYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCL
ELSEYLYTKIKNREEYEMVFDGEPEHTNVCFWYIPQSLRGIPDSEERREKLHRVAPKIKA
LMMESGTTMVGYQPQADKVNFFRMVVSNPAATKSDIDFLIEEIERLGQDL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctctgctccatcctcctccaacgccaatcaggactccaaccccactaattta
cgacccacaacttacgacaactggtgtgatgtggctcatggatgtaccagaaaaattggt
ctcaaaatatgtgggttcttgcaaaggaacaacagcctggaagataagagccggattgtg
agctctctcaaagaaaggcaatcttccaagaacctgctggcttgtgagaacagcgagagg
gaagccaggttcaggcgggccgagacagacttctccaatttatttgctagagatttgctg
cctgccaagaatggcgaggagcagaccatgcagttcctgctggaggtggttgacattctc
ctgaactacgtgaagaagacgttcgacaggtccaccaaagtcctggacttccatcacccg
caccagctgctggaagggatggagggcttcaacctggagctctcggacaaccccgagtcc
ctggagcagatcctggtggactgcagggacacgctgaagtacggagtcaggacaggtcat
cctcgttttttcaaccagctttccactggactggatattattggcttggctggtgaatgg
ctgacatcaactgcaaatactaacatgtttacatatgagattgcacctgtttttgtcctc
atggagcaaataacgcttcgaaagatgagagagattattggatggtcaaataaagatggt
gatggaatattctcacctggaggggctatatccaatatgtacagcgtaatggctgctcgc
tacaagtatttccctgaagtcaaaactaaaggcatggctgcagttcctaaactggttctc
ttcacttcggaacatagtcactactcaataaagaaagctggggctgcacttgggtttgga
acagaaaatgtgattttgataaaatgcaatgaaagagggaaaataataccagctgatttg
gaagccaaaattctggaagctaagcaaaagggacatgttccactttatgtaaatgcaacc
gcaggcacaacagtgtacggggcctttgatccaatagaggagattgcagacatttgtgaa
aaatataacctctggctccatgtagatgcggcttggggaggtggacttctaatgtccagg
aagcatcgtcataaactgaatggaatagaaagagccaattcggtcacatggaatccacac
aagatgatgggagttttgttacaatgttcggccattctgattcgggaaaagggtatactt
caaggttgcaatcagatgtgtgcaggatatctgttccagcaagataaacaatatgatata
tcctatgacactggagataaagcaatacaatgtggtcgtcatgtggacattttcaaattc
tggttgatgtggaaagctaagggtacagtaggatttgaaaatcagatcaacaaatgtctg
gaattgtcagagtacctctatactaaaattaaaaacagggaagaatatgagatggttttt
gatggagagcctgaacacacaaatgtatgtttctggtacattcctcagagtctcaggggc
ataccagactctgaggagagaagagaaaagctacatagggtggcaccaaaaatcaaagct
ctgatgatggagtcaggtaccacaatggttggatatcagccacaggcagataaagtcaac
ttcttccgaatggttgtctcaaacccggcggcaactaagtctgacattgacttcctcatt
gaagaaatagaaagattggggcaggatctgtaa
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