Trachemys scripta elegans (red-eared slider): 117888012
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Entry
117888012 CDS
T07347
Symbol
SETD1B
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00310
Lysine degradation
tst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117888012 (SETD1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117888012 (SETD1B)
Enzymes [BR:
tst01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
117888012 (SETD1B)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117888012 (SETD1B)
HMT complexes
COMPASS/SET1 complex
117888012 (SETD1B)
COMPASS/SET1 complex (yeast)
117888012 (SETD1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
117888012
NCBI-ProteinID:
XP_034646882
LinkDB
All DBs
Position
15:complement(6737585..6808513)
Genome browser
AA seq
2001 aa
AA seq
DB search
MSFKEIKAGEKAKHPEDHGKKQSSSWINGMENSTQASTSVEKRNHHWRSYKLIIDPALKK
GQHKLYRYDGQNFSMPNSGIAPVDCVRDPRIGRIWTKTKELELSVPKFKIDEFYVGPVPP
KQVTFAKLNDNIRENFLTDMCKKYGEVEEVEILYNPKNKKHLGIAKVIFATVKGAREAVQ
HLHNTSVMGNIIHVELDTKGETRMRFYELLVNGLYTPQTLPVGNEQDVSPPVNETQQLTD
SVKRLKDSNLSSAGSSITPNSSTPFSHDTAYSSSRQDTPNSYSQYTPQSQGTPLTPRLGT
PFSQDSTYSSRQTTPAYHYGQDSGYKPRRHETKFTDAYNRRPGHHYVHNSAGVYRGSEHQ
FSTFKSHQQEPVQYSHTPPLSHSGSSSYKSAFSPYQAPAVFPPSDEQQYPQTSRDTEYRR
PAPPPAEILVESSAATNIDFVPVKEKQEELPSLPQSNCLTEQSTASFSQTPERSETPGTP
TMESEMQHNSLDSRIEMLLKEQRTKLPFLNEHDSDNEIRMEGSPISSSSSQLSPIPLYGS
NSQPSYRAQTPSSRPSSTGLEDISPTPLPDSDDDEPIPGTAPLSQNSRGTSEASMTPIDQ
LSRTSKAETSETKEMLPGDQTPTSEKMDEGQHSSGEDMEISDDEMNSSPITSAECAKTIV
VNSSVSNSAVMAQSIPMPPPGFPPLPPPPPPQPGFPMPPPLPPPPPPTHPAVTVPPPPLP
APPGVPPPHILPPLPPFHPGMFPVMQVDMINVLGNQWGGMPMSFQMQTQMLSRMMQGQNT
YQYPPFMGSRMQFVNLPPYRPFSMGAAIGRGQQWPPLPKFDPSVPPPGYVPKKEDPHKAT
VDGVLLVIVKELKAIMKRDLNRKMVEVVAFRAFDDWWDKKERLAKASLTPVKSGENKDEE
KPKPKDRITSCLLENWNKGEGLGYEGIGLGIGLRGAIRLPSFKVKRKEPPEAASAGDQKR
IRPSTSVDDEDEESERDRDMSDVTSDLSKKDAEAVGLRRRPARPLELDSEGEEGDETSGK
EEESCSEKEDEQEEEGGLVKAAPGKEEDEEEEEDEEEEEEDADEEEEEDEDEETGVETSE
KEDEQDSEEEDVVSPTSSKAEVESSDESEDSSEFESSSDSDEEEEEEEEEEEEEEVAAED
QDREAMAAEIELESASHELADEEKETILELFPVDDYMEATSLALEAPAMAVKEEEMEETK
QREDESSEVPEESTAAEGLVVTERDQEVKLMPSPIGVAVEESELDIELKPKVLEGPKPES
QDEEENLCLPAPVVFEEPLPSKSRFFSKSDDSDLEARVTGKLLSTAEEEEERLPWTPGRD
IAVHSDSDTPILPAHKVPPSTLPLPTTPSKEEPLLPPENFPEQLTVTKTALEEELPRTPG
RDIMAKSSHGFAKSQSTDTIPATPGSDAPLTGSSLTLSSPQVPGSPFSYPSQSPGINSGI
PRTPGRDFNFTPTFPEPGATLPCLLSGKKPSEDEPEEKCFKEPLSASRTVSMNSVPSPIP
FASPPETDFHTDIDLPPDEPVSVAALPCVPVDGKTSIEESKVAVKSVLLSPEAPTVSLPL
PLPPTPSSLPTKRKPGRPKRSPPSVLSLEAYPSKTSEPPPVPVALTESAVSKELLGGHPD
AFYGLKDPEAVTLDFRNDSFHEKITPEAIAEKLPFKELENQWNEDFKEEEIHVKPKRQWR
RQKKTPEDIPVIPSPEYSPHRPHFRPRSEFEEMTILYDIWNGGIDEEDIKFMCITYDRLL
QQDNGMDWLNDTLWVYHPSTSFSTPKKKKRDDGMREHVTGCARSEGYYKIDKKDKLKYLN
NSRAFAEEPPADTQGMSIPAQPHASTRAGSERRSEQRRLLSSFTGSCDSDLLKFNQLKFR
KKKLKFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFR
VDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSKQHINVNEEITYDYKF
PIEDVKIPCLCGSENCRGTLN
NT seq
6006 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcaaggagatcaaggcaggggaaaaagccaagcacccagaagatcatggcaaa
aaacagagttcaagttggatcaacggaatggagaatagcacacaagccagcacttctgtc
gagaaaagaaatcaccactggagaagttacaaattgattattgacccagctctgaaaaaa
ggacagcataaactctatcgttatgatgggcaaaattttagcatgcctaactcgggaatt
gccccggtggattgtgtcagagatcccaggataggaagaatatggaccaaaaccaaggag
ttggagctttctgttcccaaattcaagattgatgagttttacgtggggccagtgcccccc
aagcaggtaacctttgccaagttgaatgacaacatccgtgaaaactttctgaccgacatg
tgcaagaaatatggtgaagtggaagaagtagagattctctacaatcccaagaataagaag
cacctgggcattgccaaagtgatctttgccacagtgaagggtgccagggaagccgtccag
cacctgcacaacacatcagtcatgggcaacatcatccacgtggaactggatacaaaaggt
gaaacccgtatgcggttctatgaactgctggttaatggtctttacactccgcagaccctt
cctgtaggcaatgagcaggatgtctcgccacctgtgaatgaaactcagcagttgactgat
tctgtaaaacgtctgaaagacagtaacctttcttctgcgggatcatccattaccccaaac
agtagcaccccgttttcccatgatacagcctattccagcagtcggcaagacaccccaaac
tcgtatagccagtataccccacagtcccaaggaaccccactcaccccacgactggggact
ccgttttcccaagattcaacctattccagtcgtcaaacgacaccagcttaccattacgga
caggactctgggtataaacccaggagacatgaaacaaaatttacagatgcctataataga
cgaccaggacatcactatgtccataactcggcaggtgtttacagagggtcagaacatcag
tttagcacgttcaagtctcatcagcaagagccagtacaatattctcacactcctcccttg
agccactctggttcttcaagttataaatctgccttctctccataccaagcaccagctgta
tttcccccatctgatgaacagcagtatccccaaacttccagagacactgagtaccggaga
cctgccccgcctccagctgagatcttagtagaaagtagtgctgctacgaatattgatttt
gttcctgtgaaagaaaaacaggaggaactcccatccctgccacagtcaaactgtcttacc
gaacaaagtacagcatccttctctcagactccggaaaggagtgagacacctggcacccca
accatggagtctgaaatgcagcataacagtttagactcaaggattgagatgctcttgaaa
gagcagagaacaaagttaccttttctcaacgaacatgattcggacaatgagatccgaatg
gaaggtagccctatctcttcctcctcctcacaactttctcctatcccattgtatggctct
aactctcagcccagttatagagctcaaaccccctcctcacgtccctccagcactggcttg
gaggacattagtcccacaccgttaccagattctgatgacgacgagccaatccctgggaca
gctcctctgagtcagaattcaagaggaacgtcagaggccagtatgactcctattgatcag
ctgagtaggacatccaaagctgagacttctgagactaaagaaatgctgcctggtgaccag
acaccaacatcagaaaaaatggatgagggtcagcattcttcaggggaggacatggaaata
tctgacgatgaaatgaattcttcaccaatcaccagtgcagaatgtgccaaaactattgtg
gtgaactcctctgttagcaactctgctgtgatggctcagtcgatacccatgcccccacca
gggttccctccacttccacctccacccccaccccaaccaggctttccaatgccgccacct
ctaccaccaccacctccaccaactcatccagctgtcaccgtcccaccacctccgcttcct
gcgccacctggagtcccaccacctcatatcttgcctccacttcctccattccatcctggc
atgtttcctgtcatgcaagtggatatgataaatgtcctgggcaaccagtggggcggcatg
ccaatgtcctttcagatgcaaactcaaatgctgagccgcatgatgcaggggcagaacacg
taccagtacccaccttttatgggaagccggatgcagtttgtgaatcttcctccctaccgt
cccttctcgatgggggcagctattggccgggggcagcaatggccgccgctgcccaagttt
gacccctcggtcccaccaccgggttatgtgccgaagaaggaggatccgcacaaagctact
gtggacggtgtcctcttggtgattgtgaaggaattaaaagcaattatgaaaagggacttg
aaccggaaaatggtcgaggtggtagcattcagagccttcgatgactggtgggacaagaaa
gaacgtctagcaaaggcatcgctcactccagtgaagtctggcgaaaataaagatgaggaa
aaaccaaagccaaaggatcgaattacatcctgcctcctggagaactggaacaaaggagaa
gggctgggctacgagggaattggtttgggcattgggttacgaggggccattcggctgcca
tctttcaaggtgaagagaaaggagccgcctgaagctgcctcagcaggagatcagaagaga
atcaggccctccacctctgtggatgatgaagatgaagagtcagaaagggacagagacatg
tctgatgttacttcagacctgtctaagaaggatgcagaagcagtaggcctccgaaggaga
ccagcaagaccattggagctagacagtgagggggaggaaggagatgagacttcaggtaaa
gaagaagaatcctgttctgaaaaggaagacgagcaggaggaagagggaggattggtgaaa
gcagcacctggcaaggaggaagacgaggaggaggaggaagacgaggaagaggaggaggaa
gatgctgacgaagaggaggaagaggatgaagatgaagaaacaggagtagaaacaagtgaa
aaggaagatgagcaggactctgaagaagaagatgtagtgagtcccacatcttccaaagcc
gaagttgaatcatcagatgaaagtgaggactcctcagaatttgagtcgagttctgactcg
gatgaggaggaggaagaggaggaggaggaggaggaggaggaagaggtggcggctgaagac
caagatagagaagccatggctgctgaaatagagcttgagtctgctagtcatgaactagca
gatgaagaaaaagagaccatcctggagctgtttccagtggatgactatatggaagcaaca
agcctggcactagaggcaccagctatggcagtaaaagaggaagagatggaagaaaccaag
caacgggaagatgaaagtagtgaagtgccagaggaatctactgctgctgaaggtttggtg
gtcacggagagagaccaggaagtaaagctaatgccgtcccctataggtgtagcagtggaa
gagtctgaactggatattgagctgaagcctaaggtattagagggtccaaagcctgaatct
caagatgaagaagagaatctctgtctcccagcaccagtggtatttgaagaacctctaccc
agtaagagtcgcttcttcagtaagtctgatgatagtgacttagaagcccgagttacagga
aaactactatccacagcagaggaggaggaggagagactgccttggactcctggacgggac
atagcggtccattcggattctgatactcccatacttccagcgcataaggtgccaccctct
acacttccccttccaacaacgcctagtaaagaggaacctttactccctccagaaaatttc
cctgaacagttaactgtgaccaaaacagctctggaagaggagcttcctaggactccaggg
cgggatattatggccaagtcttcacatggctttgcaaagtcacagagtacagacactatt
ccagccacccctggaagtgatgctcctcttacgggaagcagcttgactttaagttcccct
caagtcccaggcagccctttttcatatccatcccagtctcctgggattaatagtggcatt
cctcggactcctgggagggattttaatttcacgccaactttcccagagcctggtgcaact
cttccttgccttctgtctggcaagaaaccatcagaagatgagccagaggagaaatgtttt
aaagaacctcttagtgcttctcgaacggtcagcatgaacagtgttccctccccaattccc
tttgctagccctccagaaactgatttccacacagacatagatttgccacctgacgagcca
gtatctgtagcagccctgccatgtgtgccagtggatggaaagacatccatagaggagagc
aaggtagccgtgaaatccgttttgctctccccagaagcgcctactgtctctcttcctctc
cctctccctcctactccttcctctctgcccaccaaaaggaaaccaggccggccgaaacga
tcacctccttcggtcctctcgttggaggcctatcccagcaaaacttcagaacctcctcct
gtcccagttgccttgactgaaagtgctgttagcaaagagttgttgggcgggcatcctgat
gctttttatggactgaaagatcctgaagcagtcaccctagacttcaggaatgacagcttc
cacgagaagataaccccggaggccatagcagagaaacttccatttaaggaactagagaat
cagtggaatgaggacttcaaagaagaggagattcacgtgaaacctaaaagacagtggcgg
aggcagaaaaagacacctgaggacatcccagtgattccttcccctgaatattctccacat
cggccccactttaggccccgctccgagttcgaggagatgaccattttgtatgatatctgg
aatggaggaatagatgaggaagatatcaagttcatgtgtatcacgtatgatcgcttgtta
cagcaagataatggtatggactggctcaacgataccctttgggtataccatccttctact
agcttttctaccccgaagaagaagaagcgggatgatggcatgcgggaacatgttacaggt
tgtgcacgaagtgaaggctattacaaaatagataagaaagacaaacttaaatacctcaac
aatagtcgtgcatttgcagaggagccgccagctgatacacaaggaatgagcatccctgcc
caacctcatgcttccacccgggctggctctgagaggaggtcagagcaacgcaggcttctc
tcatccttcactggtagctgtgacagcgacctactcaaatttaaccaactgaagttccgg
aagaaaaagctaaaattctgcaagagtcacattcatgactggggcctttttgctatggag
cccattgcagctgacgagatggtgattgaatatgtgggtcagaacatcagacaggtcatt
gcagacatgcgagagaaacgatacgaggatgaaggcattgggagcagttacatgttcagg
gtcgaccatgacaccatcattgatgcaacaaaatgtggaaactttgccaggtttattaat
catagctgcaatccaaattgttatgctaaagtcatcaccgtggagtctcagaagaagatt
gtcatctactccaagcagcacatcaacgtgaatgaggaaattacttacgactacaagttt
ccgatcgaggatgtgaagatcccatgtctgtgcggctctgagaactgcagggggaccctg
aactaa
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integrated database retrieval system
