Trachemys scripta elegans (red-eared slider): 117889411
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Entry
117889411 CDS
T07347
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04510
Focal adhesion
tst04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117889411 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117889411 (RAPGEF1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
117889411
NCBI-ProteinID:
XP_034649463
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Position
17:complement(15953869..16079632)
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AA seq
1221 aa
AA seq
DB search
MSGKIEKADSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKQADLTVKTPEKPVNKNLTWL
EEKEKEVVSALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQVDPRIQQSSAISS
CYSRVYQSLGNLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQEHP
SPTSPVKPSLPACKSDSPSELPLTDREMEILNKTTSMTQSAEILTDSMDEEVAPPKPPLP
CIRVAENSPPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPIGINRQDFDADCYAQRR
LSGGSHSYGGESPRLSPCSSIGKLSKSDEQLSSLGRDSGQCSRNTSCETLDHYDPDYEFL
QQDLSNADQIPQQVPSILSPLPESLGECGSPFHGHVFQLPPGSSPQLQYCSPLTGTQSTE
TPPALPEKKRRSAASQTSDNAGCRVSYERHPSQYDNISEDDLQNPGALSSVPFTSFAAVL
PFQQGNSSVPVEFITEFAAPDSTGDPENPPPLPEKKNKHMLAYLQFMEDYSEPQPSMFYQ
TPQNEHIYQQKNKHLMEVYGFNDSFSSTDSSQELAPPPALPPKQRQLQASYAASSFSSVS
YCVQQTKVPFTSEDTSATQGLSMSVSNSFLNRHSSFPVHSYKSVFRSYSQDFVPHNQASI
PPFLSSTSSSTPPFPPVHQSQSSDLAVPTTASQSPSTVDVPNSSSQESSFNESAPVCLPS
ETSFTDSLQTSSSENASEEAGEGEYVNLYSSGQSNGELPHSEGESPAIKDGHPKDSTSHS
STTGKESRDGGERQQKSPDALESSLEEEVDELTLIDHSEIMARLTLKQEGDDGPDVRGGS
GDILLVHATETDRKDLVLYCEAFLTTYRTFITPEELIKKLQYRYEKFCHFPDTFKKRVSK
NTFFVLVRVVDELCLVELTDEILKLLMDLVFRLVCHGELSLARVLRKNILDKVDQKKMLR
YANSIKPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKS
PNLTQFTEHFNNMSYWVRSIIMQQEKPQDRERLLLKFIKIMKHLRKLNNFNSYLAILSAL
DSAPIRRLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVH
LGNPDYIDSKVNFSKRWQQFNILDSMRCFQQIRYDIRRNDDIVSFFNDFSDHLAEEALWE
LSLKIKPRNITRRKTDREEKT
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaagatcgagaaagcagattctcagcgctcccatctctcctctttcaccatg
aagttgatggacaagtttcattcaccaaaaataaagcgaacgccatcaaagaaaggaaaa
caggctgacctgacagtgaaaaccccagagaagccagtgaacaaaaatttaacttggctt
gaggagaaggaaaaggaggttgtaagtgcattgcgctattttaaaaccattgtggacaaa
atggcaattgacaagaaagtactggagatgctgccaggttcagcaagtaaagtgctggag
gccatcttaccgctggtccaagtagacccacggattcagcaaagttctgccatctcttcc
tgctatagccgtgtgtaccagagtctgggaaatctgattcgttggtctgatcaggtgatg
ctggagggggtgaactcagaagacaaggagatggtgaccacagtgaagggtgtcataaaa
gctgttctggacggagtcaaggagctggtcagactcacaatagagaagcaggaacatcca
tctcccacaagcccagttaaacccagtttaccagcatgtaaatctgacagcccctccgag
cttcccctgacagacagagagatggagattctcaacaagacaactagtatgactcagtct
gctgagatactgactgactccatggacgaagaggttgcccctcccaaaccccctctacct
tgcattcgcgtggcagaaaacagccctcctccagcattgccccctaaaaaaaggcagtcg
gcgccttctcctaccagagtggcagtagtggcacctatgagtcgagccaccagtggatct
agtttacctattggaatcaacagacaggattttgatgctgactgttacgcacagaggagg
ctgtcaggcggcagccactcctatggaggggaatcccctcgcctctcaccatgcagtagc
ataggcaagctcagcaagtctgatgagcagctctcctcgctgggccgggacagcgggcag
tgctcccgcaacacaagctgtgaaacattagatcactatgatccggactatgaatttctg
cagcaggacctctctaatgctgaccagatacctcagcaggtgccaagtatcctcagccca
ttgccagagtctttgggcgagtgtggctccccatttcatggacatgttttccagctcccc
ccgggcagctccccccagctgcaatactgcagcccgttgacaggaacacagtctacggag
actcctccagctttgccagagaagaagaggaggagtgcagcctctcagacttcggataat
gcaggctgcagggtctcctatgagcggcacccctcgcaatatgataacatctcagaggat
gatctgcagaacccaggggctctctcgtcagtacccttcacgtcatttgctgctgtcttg
cccttccagcagggcaattcttcagtgccggtggaattcattactgagtttgctgctcct
gattctacgggtgacccagagaacccccctcctctgccagagaagaaaaacaaacacatg
ctggcgtatttgcagtttatggaagactactcagagccgcagccatccatgttctaccag
acacctcagaacgaacacatctaccagcagaaaaacaagcacctcatggaagtctatggg
ttcaacgactcgttcagcagcacagactcatcgcaagagctggcaccaccccctgccctt
ccgccaaaacaacgacagctgcaggcctcctatgctgcctcttccttctcttctgtctcc
tactgtgtccagcaaactaaagtgcccttcacctccgaggacaccagtgccactcagggc
ctcagtatgtccgtctctaactcctttctcaaccggcacagctcctttcctgtgcattcg
tacaaatctgtgtttaggtcctactcacaggactttgtgcctcacaaccaagcttccatt
cctccttttctttcttctacctcctcttccaccccgccttttccacctgtccatcagtct
cagagctctgacctagcggtgccaaccacagccagccagtcaccaagcactgtggatgtg
ccaaactcctcttctcaggagagcagctttaatgagagtgctcctgtctgccttccttct
gaaacttctttcactgattctctccagacatcttcgagtgaaaacgccagtgaggaggct
ggtgagggtgaatacgtcaatctgtattcctctggccaaagcaacggggaactccctcac
tctgaaggagaatctcctgccatcaaagacggccaccccaaagactccacttcgcatagc
agcaccactgggaaggaaagcagagatggtggtgagaggcaacaaaagtcaccggatgct
ttggaatcatcgctagaggaggaggtagatgagctgaccctgattgaccacagtgaaatt
atggctcggctgacactgaagcaggagggcgatgatgggccagatgttcgtggtggatcc
ggggatatcttgctagtccacgcaactgagactgacaggaaagatctggtgctgtactgt
gaagcctttttgacaacgtacagaacattcattacccctgaagagctcatcaagaagctg
cagtacaggtatgagaagttctgtcacttcccagacacgtttaagaagcgagtcagcaag
aacacattcttcgtgctggtgagagtggtggacgagctgtgcttagtggagttgacggat
gagattctaaagctgttaatggacctggtgttccggctagtctgccatggagagctcagc
ctcgctagagtgctacgcaaaaatattctggataaagtggatcagaagaaaatgctgaga
tatgccaactcaatcaaacctctagcggcccgaggggtggcagccaggccggggaccttg
catgatttccatagtcatgaaatagctgagcagctgaccctcttagatgccgagctcttc
tataagatagagatcccagaagttttgctttgggcaaaagagcaaaatgaggagaagagt
cccaacctgacacagttcactgagcactttaataacatgtcctactgggtccgttcgata
attatgcaacaagagaaaccgcaagacagagagaggctgctccttaaatttataaagatt
atgaagcacttacgaaagctgaataattttaactcctatctggccattctttctgcactg
gattcagcacccatccgaaggctggagtggcagaaacagacatcggagggcctggcagag
tactgcacactcatcgacagctcctcgtccttccgggcttaccgagcagctctggcagag
gtggagcctccctgcataccttacctaggcctgattctgcaggacttgacctttgttcac
ctgggaaaccccgattacattgatagcaaagtgaacttttccaaacgctggcaacagttt
aacatcctggacagcatgaggtgcttccaacaaatacgttacgacatcagaagaaatgac
gatatagtctcattcttcaatgacttcagcgaccatttggctgaggaggccttgtgggaa
ctgtctctcaaaatcaaacctcgaaacataacgaggcgaaaaacagacagggaagaaaaa
acctag
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integrated database retrieval system
