Treponema succinifaciens: Tresu_1857
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Entry
Tresu_1857 CDS
T01461
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tsu
Treponema succinifaciens
Brite
KEGG Orthology (KO) [BR:
tsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsu03016
]
Tresu_1857
Enzymes [BR:
tsu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Tresu_1857
Transfer RNA biogenesis [BR:
tsu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Tresu_1857
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AEB14747
UniProt:
F2NSH3
LinkDB
All DBs
Position
complement(1997244..1999187)
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AA seq
647 aa
AA seq
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MIKPNSLVIYKNTAAVVLSVGENNKFSIKFQSVPATATKPAVYETQNVRAKDILLLNEGP
VSSLESVLKFAVEKCPSASDIYNLEQANEIFLQIKDCYELLSGETPGESYPFNELVSLFR
GEVKPDEAWGLYCALKNTVYFSQVLKDQLDGKIAFTVRPQQEIDSLVKKAGEKEKEAELR
SEFIQRLKTGKLLPEDSVFMGDVEALALGKTDKSRTMHDAGLKETPERAHKLLLDTGLWD
ITRNPYPLRWGLSTKSASDSLDSPPEEERLELDCISYAIDNAWSTDPDDAVAFDGKYLWI
HIADPASTVQPDSPIDKNARARGATLYIPEGAARMLCESCLEDYALGLKEKSRALSFRIL
LDENGAIEDCSVFKTLVKVKRLSYEQADDLMESEELKPLFSIAWKNVERRKKSGAVQISM
PEVHISVEPETKKVSIEPLVHPKSSEMIREMMLLAGEGAAKFAFKNQIPFPFVSQEAPVI
PDDVPEGLAGQFRLRRCMRKRSVGVTPGMHCALGLNMYSQVTSPLRRYGDLIAHIQLRAF
LDKRELLDKDTILMRISEGDAGAQAAHKAERKSNMHWTLVYLLQNPGWTGEAVCVDKGMK
LPLFSIPSLAIETFMPCPEKTELNDVVKIKVKKIELTELQVEFEIVN
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacctaattcacttgttatatataaaaatactgctgctgttgttctttctgtt
ggtgaaaataataagttttctataaaatttcagtctgttcctgccactgccacaaagcct
gctgtttatgaaactcagaatgtccgcgcaaaggatattcttttgctgaatgaaggtcct
gtttcttctcttgaatctgttttgaaattcgctgtggaaaaatgtccttcagcctctgat
atttacaatcttgagcaggcaaatgagatttttcttcagataaaagactgctatgaactt
ttgtcaggcgaaactcctggcgaaagttatccttttaatgaattggtttcactttttaga
ggcgaagtaaaacctgatgaggcttggggactttactgcgccttaaaaaatactgtttat
tttagccaggttttaaaggatcagctggacggaaaaattgcgtttactgtccgccctcag
caagaaattgactcccttgtaaaaaaagccggtgaaaaggaaaaagaagccgaactgcgg
tctgaatttattcagcgattaaaaactggaaagcttttgccggaagattctgtttttatg
ggcgatgtggaagctcttgcgcttggaaaaacagacaaaagccgtacaatgcatgatgcc
ggcttaaaggaaactccagaacgtgcgcacaaacttttgcttgatacaggactttgggac
attacacgtaatccgtatcctttgcgctggggactttccacaaaatcagcgtcagattcc
cttgattctccgccggaagaagagcggcttgagcttgactgtatttcttatgcaattgac
aatgcctggtcaactgatccggacgatgctgttgcctttgacggaaaatatctttggatt
catattgcagatccggcgtctacggttcagccagattctcctattgataaaaatgcgcgt
gcaagaggtgcaactctttatattccagaaggtgctgccagaatgctttgtgaaagttgt
cttgaagattatgcgcttggactaaaggaaaaaagccgtgccttgtcttttagaattctt
cttgatgaaaacggcgcgattgaagattgttccgtttttaagacacttgtaaaagtaaag
cgcctttcttatgagcaggctgatgatcttatggaaagtgaagagctaaagcctcttttt
tctatcgcatggaaaaatgtggaacgccgcaaaaagtccggggctgttcagatttcaatg
ccggaagttcatatttccgttgaacctgaaacaaaaaaagtttcaatcgagcctcttgtt
catcctaaaagctcagaaatgatccgtgagatgatgcttttggccggagaaggagctgca
aaattcgcattcaaaaatcagattccttttccgtttgtaagccaggaagctcctgtaatt
ccagatgatgttccggaaggtcttgcaggtcagttcaggcttagaagatgcatgagaaaa
agatctgtcggtgtaactcctggaatgcattgcgctttggggcttaatatgtacagtcag
gttacaagccctttgcgccgctacggagacttgattgctcatattcagctgcgagcattt
ttggataaaagggagcttttggacaaggacactattcttatgcgtatttcagaaggagat
gccggggctcaggcggctcacaaggctgaacgcaaaagcaatatgcactggactcttgtt
tatcttttgcaaaatcccggctggacaggtgaggctgtctgcgttgacaagggaatgaag
cttcctcttttttcaattccttctcttgcaatagaaacctttatgccttgccctgaaaaa
acagagcttaatgacgtggtgaaaataaaagtaaagaaaattgaacttacagaactgcaa
gttgaatttgaaattgtaaattaa
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