Thiohalobacter thiocyanaticus: FOKN1_1769 Help Entry FOKN1_1769        CDS       T05229                                  Name (GenBank) NAD-dependent DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ttc  Thiohalobacter thiocyanaticus Pathway ttc03030   DNA replication ttc03410   Base excision repair ttc03420   Nucleotide excision repair ttc03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ttc00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     FOKN1_1769    03410 Base excision repair     FOKN1_1769    03420 Nucleotide excision repair     FOKN1_1769    03430 Mismatch repair     FOKN1_1769  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ttc03032]     FOKN1_1769    03400 DNA repair and recombination proteins [BR:ttc03400]     FOKN1_1769 Enzymes [BR:ttc01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      FOKN1_1769 DNA replication proteins [BR:ttc03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      FOKN1_1769 DNA repair and recombination proteins [BR:ttc03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      FOKN1_1769    NER (nucleotide excision repair)     GGR (global genome repair) factors      FOKN1_1769    MMR (mismatch excision repair)     DNA ligase      FOKN1_1769   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       FOKN1_1769 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT HHH 5_3_exonuc TF_Zn_Ribbon Motif Other DBs NCBI-ProteinID:  BAZ94155 UniProt:  A0A1Z4VRQ2 LinkDB All DBs Position 1871903..1873936 Genome browser AA seq 677 aa AA seqDB search MSASNKLRERVERLREQIRHHNYLYYALDAPEISDAEYDALLRELQELESDHPELVTADS PTQRVGAEPVAAFGTVRHELPMLSLDNAFSDQELEDFDRRIHERLKTEEAIEYAAEPKLD GLAVSLLYEKGRLVRGATRGDGATGEDITANVRTIASIPLKLVGRDYPERLEVRGEVYMT HAGFRRLNEAAEREGGKTFVNPRNAAAGSLRQLDPKVTAKRPLEFFCYGAGRVEGAELPD RHIDVLEQLKAWGQRIYPEIRRVKGLDGCHEYYQDMERRRESLDFDIDGVVFKVDRRDLQ ERLGFVSRAPRWAIARKFPAQEVNTVLREVEWQVGRTGVLTPVARLEPVFVGGVTVTNAT LHNPDEIERKDIRLGDTVVVRRAGDVIPQVVAVVKARRPRGAKRISLPKRCPVCHSDVVR DEGAAALRCSGGLHCPAQRKAGLIHFASRRAMDIDGLGDKLIEQLVERDLVQDAADLYAL TQAQLAGLDRMAEKSAQNLIQALDRSKTVSLPRFIHALGIPEVGEATAKGLAAHFGSLDG LMEADEAALQEVPDVGPVVAREIATFFNQKHNRQVIDKLRRHGIEPPAQKIKRRAELPIK GQTWVLTGALESMTRDQAKERLEALGAKVTGSVSKKTDYVVAGSEAGSKLTKAEQLGVEV LAEAAFLKRLEELEQGR NT seq 2034 nt NT seq  +upstreamnt  +downstreamnt atgagcgcctcgaacaagctgcgggaacgggtcgagcggctgcgcgagcagattcgtcac cacaactatctctactatgccctcgacgcccccgagatatctgacgccgaatacgacgct ctcctgcgcgaactgcaggaactggagtccgaccaccccgaactggtcaccgcggattcg cccacccagcgggtcggcgccgaaccggtggccgccttcggcacggtgcgccacgaactg cccatgctgtcgttggacaacgccttctccgaccaggagctcgaggacttcgatcgccgc atccatgagcgcctgaaaaccgaggaggcgatcgaatacgccgccgagcccaagctggac gggctggccgtgagcctgctgtacgaaaagggccgtctggtgcgcggcgcgacccgcggc gacggcgccaccggcgaggacatcaccgccaacgtgcgcaccatcgcctccatccccctg aagctggtcggcagggattatccggaacgcctggaggtacggggcgaggtctacatgacc cacgccggcttcaggcggctcaacgaagcggcggaacgggaaggcggcaagaccttcgtc aacccccgcaatgccgcggccggcagcctgcgccagctcgatccgaaggtcacggcgaag cggccgctggaattcttctgctatggcgccggacgggtcgagggtgccgaactgcccgac cgccacatcgatgtgctggagcagctgaaggcctggggtcagcgcatctatcccgagatc cgccgggtcaaggggctggatggctgtcacgagtactatcaggatatggagcgccggcgc gaatccctggacttcgatatcgacggcgtcgtgttcaaggtcgatcgccgcgacctgcag gaacggctcggtttcgtttcccgcgccccgcgctgggccattgcccgcaagttcccggcc caggaggtcaacactgtgctgcgcgaggtggaatggcaggtcgggcgcaccggcgtactg acgccggtggcgcggctggagccggtattcgtcggcggggtgacggtcaccaacgccacc ctgcacaacccggacgagatcgagcgcaaggatatccgcctgggcgataccgtggtggtg cgtcgcgccggtgacgtgattccgcaggtggttgccgtggtcaaggccagacgccccagg ggtgcgaagcgcatcagcctgccgaagcgatgccccgtgtgtcactccgatgtggtgcgc gacgagggcgccgccgccctgcgctgcagtggcggactgcattgcccggcccagcgcaag gccggactgatccacttcgcctcgcgccgcgccatggacatcgacggcctgggcgacaaa ctgatcgagcagctggtcgagcgcgacctggtgcaggatgccgccgatctgtatgcgctt acacaggcgcagctcgccggcctggatcgcatggccgagaagtcggcgcagaacctgatc caggccctggacaggagcaagacggtctcgctgccgcgcttcatccatgcactgggtatc ccagaggtcggagaagccaccgccaagggcctggccgcgcacttcggcagtctggatggc ctgatggaggccgatgaagcggcactgcaggaggtgccggatgtcggcccggtggtggcg cgcgagatcgccactttcttcaatcagaaacataaccgccaggtgatcgacaaactgcgc cgccacgggatcgaaccgccggcgcagaagatcaagcgccgggcagaactgccgatcaag gggcagacctgggtgttgaccggcgcgctcgagtccatgacccgtgaccaggcgaaggag cggctggaggcgctgggcgcgaaggtgaccggcagcgtgtcgaagaaaaccgactatgtt gtcgccggcagcgaggcgggctccaaactcacgaaggccgagcagttgggggtcgaggtg ctggctgaggccgccttcctgaaacggctggaggaactggaacagggcaggtga

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