Thioalkalivibrio paradoxus: THITH_07700
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Entry
THITH_07700 CDS
T03590
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
tti
Thioalkalivibrio paradoxus
Pathway
tti03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THITH_07700 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tti03400
]
THITH_07700 (uvrC)
DNA repair and recombination proteins [BR:
tti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THITH_07700 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
HHH
HHH_2
HHH_3
GIY_YIG_domain
Motif
Other DBs
NCBI-ProteinID:
AHE98169
UniProt:
W0DHU6
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Position
1611208..1613034
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AA seq
608 aa
AA seq
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MSATEPAFDHREFLASCTSAPGVYQMLDDAATVLYVGKARNLRKRLGSYFRSTGERSPKT
RAMVAQIADIRVAVTHTEAEALLLEANLIKRHRPRYNVLLRDDKSYPYIFVSNHEYPRLG
FHRGARRKGVRYFGPYPSAVAVRETLNLLQKLFLVRQCEDSVFAHRSRPCLQHQIGRCTA
PCVALIDPDEYAADVQASVRFLEGRSEQVIGDLVQRMETASAGLQFERAARLRDQIAHLR
QISEQQYVAGGDGDADIFALARAGGAAAVQIFFVRHGQNLGNSVRYPKLPDDAGDDEIMA
AILAQYYAEREPPRLVLVSHRPREPEGLAALLEQRRGGRVRLAWSLRGERARWVEMAQRN
AELALKTRLASQAGQQSRLQALAEALQLPEPPARMECFDISHTQGEGTVASCVVFGPEGP
LKSDYRRFNIAGIAPGDDYAAMHQALDRRFARLKKEAGPLPDILFIDGGQGQVNQALDVL
RNHGIKGMRVVGVAKGPERRAGLETLVLSGVQGPSILPAQSSALHLIQQIRDEAHRFAIT
GHRLRRAKARRESRLEDIPGLGPKRRGALLRHFGGLRGISRAGVEELAKVPGISHNLAQA
IYEGFHEN
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaccgaacccgccttcgaccacagggaattcctggcgtcctgcacctcggcc
ccgggtgtctaccagatgctcgacgatgccgcgacggtgctgtatgtgggcaaggcccgg
aacctgcgcaagcggctcgggagctacttccgcagtaccggcgaacgcagcccgaagacg
cgcgcgatggtcgctcagatcgcggacatccgggtggcggtcacgcacaccgaagccgag
gcgctgctgctcgaggcgaacctgatcaagcggcaccggcctcgctacaatgtgctcttg
agggatgacaagagttacccgtacatctttgtttccaatcacgaatatccccggctcggt
tttcatcgcggcgcccgccggaaaggcgttcgctacttcgggccatacccatctgcggtg
gcggtccgcgagaccctgaacctgctgcagaaactgttcctggtccggcaatgcgaggac
agcgtgttcgcccaccgcagccgcccctgcctgcagcaccagatcgggcgttgcaccgcg
ccctgcgtggcgctgatcgatccggacgagtacgcggccgacgtgcaggccagcgtgcgc
ttcctggaagggcgcagcgagcaggtgatcggcgacctcgtccagcgcatggagacggcc
tcggccggactgcagttcgaacgggccgcacggctgcgcgaccagatcgcccacctgcgc
cagatctccgagcagcagtacgtggccggtggcgacggcgacgccgacatctttgcactg
gcgcgcgcgggcggggcggccgcggtgcagatcttcttcgttcgccacggccagaacctg
ggcaattcggtgcgctacccgaagctgcccgatgacgccggcgacgacgagatcatggcc
gcgatcctggcgcagtactatgccgagcgcgaaccgcctcggctggtgctggtgtcgcat
cgcccgcgcgagcccgagggcctggccgcactgctggagcagcgccgcggcggccgcgtc
cggctggcgtggtcactgcgcggagagcgcgcccgctgggtggagatggcgcagcgcaat
gccgaactcgcactgaagacgcggctggccagccaggcggggcagcagtcccggctacag
gcgctggccgaggcgctgcagcttccggaaccgccggcgcggatggagtgcttcgacatc
tcccacacccagggcgaaggcactgtcgcgtcctgcgtcgtgttcggccccgaggggccg
ttgaagtccgattaccgccggttcaacattgccggaatcgcccccggcgacgactatgcg
gcgatgcaccaggcattggaccgccggttcgcgcgactgaagaaggaggccgggccgctg
ccggacatcctgttcatcgacggcgggcagggccaggtgaaccaggccctggacgtactg
cgcaaccacggcatcaagggcatgcgcgtggtgggtgttgccaagggaccggagcggcgc
gcgggtctggagaccctggtgttgagcggggtgcaggggccttctatactgccggcgcaa
tccagcgccctgcatctgatccagcagatccgcgacgaggcgcaccgattcgcgattacc
ggacaccggctgcggcgcgcgaaggcccggcgggaatcccggctcgaggacatccccggg
ctgggtccgaaacgaaggggagcgctgctgcgccacttcggcgggctgcgaggtatttcg
cgtgccggagtcgaagagttggccaaggtccccggcatcagccacaacctggcgcaggcc
atctacgaaggattccacgagaactga
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