Thermoanaerobacterium thermosaccharolyticum DSM 571: Tthe_0627
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Entry
Tthe_0627 CDS
T01299
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
ttm
Thermoanaerobacterium thermosaccharolyticum DSM 571
Pathway
ttm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ttm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tthe_0627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttm03400
]
Tthe_0627
DNA repair and recombination proteins [BR:
ttm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tthe_0627
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Tthe_0627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND3
AAA_21
RsgA_GTPase
DnaJ_CXXCXGXG
APS_kinase
AAA_22
AAA_18
AAA_23
nSTAND1
AAA_14
NACHT
Viral_helicase1
AAA_33
RNA_helicase
cobW
MMR_HSR1
NB-ARC
AAA_28
PRK
MeaB
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ADL68188
UniProt:
D9TT46
LinkDB
All DBs
Position
628189..630972
Genome browser
AA seq
927 aa
AA seq
DB search
MAIDKIVIKGAKVHNLKNIDVEIPRYKFVVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVEYIEGLSPAISIDQKTTNRNPRSTVGTVTEIYDYLRLLYARIGIP
HCPKCGKEISMQTVDQMVDRIMKLNEGTRIQVLSPIIRGRKGEYQKLMEDIKKSGYVRVR
IDGIMYDLSEEIKLEKNKKHTIEVVIDRIIIKPHIESRLTDSIESALKLSDGVVTIDVID
GEGFTMSEKYSCPDCNIGIEELSPRMFSFNSPYGACPTCAGLGEFMRVDPDLLLPDRSKS
LKDGAFSGFIVSQESYTYQNILNLVESFGYTENTPLEEYSDDLINILLYGKDKNGKRHGF
EGIVNNLERRYNSTNSSFMREEIEKYMRPIVCPDCHGARLKPEVLAVTVGGMPINKITDL
SVTELLRFMDELKLTEREEFIAHQIIKEIKARLNFLKDVGLDYLTLSRNAGTLSGGESQR
IRLASQIGSGLVGVTYILDEPSIGLHQRDNERLLNSLKKLKDQGNTLIVVEHDEDTMFAA
DYIVDVGPGPGEHGGKIVAAGTVEDIMACEESLTGQYLSGKKKIDVPKTRRKPNGHYLTV
RGASENNLKNIDVTFPLGILICITGVSGSGKSTLINEILYKALAQKLYKAKDLPGKYSSI
EGIEFIDKVINIDQSPIGRTPRSNPATYTGVFDPIRELFSNTPDAKMRGYKPGRFSFNVK
GGRCEACSGDGIIKIEMNFLPDVYVPCEVCKGNRYNRETLEIKYKGKNISDVLNMTVEEA
LDFFKNIPRIKSKLETLNDVGLGYIKLGQPSTQLSGGEAQRVKLATELSRRSTGKTVYIL
DEPTTGLHFADVDRLLDVLNRLVDGGNTVIVIEHNLDVIKSADYIIDMGPEGGDRGGRIV
ATGTPEEVAENNFSYTGQFLKKILARQ
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
ttggcaatagataaaatcgtcatcaaaggtgcaaaagttcataatttaaaaaatatagat
gtggagataccacgatataaatttgtagttattactggtctatctggttctggcaaatca
tcactggcatttgacaccatctacgctgaaggtcaaagaaggtacgttgaatctctctct
gcgtatgcaaggcagtttttagggcagatggataaacctgatgtggaatacattgaaggc
ttatcacctgcgatttcgatagaccagaagactaccaatcgaaatcctcgctcaacagtt
gggacagttacagaaatatacgattatttgagattactgtatgccagaataggtatacct
cattgccccaagtgcggcaaagagatttcaatgcagacggtagaccagatggtggacagg
ataatgaaattaaatgaaggcacgaggatacaggttctttcgccaatcataagagggcgg
aaaggcgaataccagaagcttatggaagacatcaagaaaagtggatacgttagagtgaga
atagatggaataatgtacgatttaagcgaagaaataaaattagaaaagaataagaaacat
acaattgaagttgtcatagatagaatcattataaaaccacatatcgaatcaagacttaca
gactcaattgaatctgctttgaaattatccgacggcgttgttacaatcgatgttatagat
ggagaagggtttaccatgtctgaaaagtattcatgccctgactgcaatataggtatagaa
gaactatctccaaggatgttttctttcaatagtccatacggggcttgcccaacttgtgca
ggacttggcgaatttatgagggtcgatccggatttactgctacctgacagaagcaaatct
cttaaagatggggcattttccggctttatcgtttcacaagaaagctacacatatcaaaat
atattgaatcttgtagaaagctttggatatacagaaaatactccattagaagagtacagc
gatgatttaataaatatattattgtatgggaaagataaaaacggtaaaaggcatggattt
gaaggaattgtaaataatcttgagagaaggtataattctacaaattcaagctttatgagg
gaagaaatcgaaaagtatatgagaccaattgtttgtcctgattgccatggtgctcgtcta
aaacctgaagtgctggctgttacagtaggcggtatgccaataaataagataaccgatctg
tctgtgacagagcttttgagatttatggatgagcttaaattgacagagagagaagagttt
atagcgcatcagataataaaggagattaaagcgagacttaacttccttaaagatgtagga
ttagattaccttactctttcaagaaatgctggtacattgtcaggaggagagtcacagagg
ataaggcttgcaagccagataggctcaggactggtaggagttacttatatacttgatgag
cctagcattgggctacatcaaagagacaacgaaaggcttttaaattcccttaaaaagtta
aaagatcaaggaaatacgttgattgttgtagaacatgacgaggatacgatgtttgcggct
gattacattgttgatgtaggtccagggcctggagaacacggtggtaaaatcgtggcagca
ggaacagtagaagatatcatggcatgtgaagaatctcttactggtcaatatttaagtgga
aagaaaaaaatagatgttcctaaaacgaggagaaaacctaatggtcactatttgacagtg
cgtggtgctagcgaaaataacttaaaaaacatcgatgtgacatttcctcttgggattttg
atatgcataacaggtgtgtctgggtcaggtaaaagtacactcataaatgaaatactttat
aaagcgcttgcacaaaaattgtacaaagcaaaagacttgcctggcaaatactcatctata
gaagggattgaatttatcgataaagtgataaatatagatcaatctcctataggaaggaca
ccaaggtcaaatccagccacatatacaggtgtatttgacccaatcagagagctgttttca
aacacacctgatgcaaagatgagaggttataaacctggccgctttagcttcaatgttaaa
ggcggaaggtgtgaggcttgcagtggagatggtataataaagatagagatgaatttcctt
ccagatgtatatgttccgtgtgaagtctgcaaaggcaataggtacaatagggaaacgctg
gagataaaatacaaagggaaaaatatctctgatgttttgaacatgacggttgaagaggca
ttggatttttttaagaatatacctagaataaaaagcaaacttgaaacattaaatgatgtg
gggttaggatatattaagttaggacagccgtccacacagctgtctggcggtgaggcccaa
agggttaagcttgcgacagaattgtctcgccgttcaacagggaagactgtgtatatactt
gacgagccgactacaggtcttcattttgctgatgtagataggcttctagacgttttaaac
aggcttgtggatggaggcaatacggtcatagtgatagaacacaaccttgacgtcattaaa
tcagccgattatattatcgatatgggacctgaaggcggtgacagaggaggaaggattgtg
gctaccggtacaccggaagaagtggctgaaaacaacttttcatatactgggcagtttttg
aaaaaaattcttgccagacaatga
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