Thermoanaerobacterium thermosaccharolyticum DSM 571: Tthe_0704
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Entry
Tthe_0704 CDS
T01299
Name
(GenBank) ATP dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
ttm
Thermoanaerobacterium thermosaccharolyticum DSM 571
Pathway
ttm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ttm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Tthe_0704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttm03400
]
Tthe_0704
Enzymes [BR:
ttm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Tthe_0704
DNA repair and recombination proteins [BR:
ttm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Tthe_0704
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
ADL68259
UniProt:
D9TTK2
LinkDB
All DBs
Position
complement(723491..724414)
Genome browser
AA seq
307 aa
AA seq
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MSMMDEKIPPMLAVSGQVFDDPDWLYEIKWDGSRTLAFLSSTTRLQDRRLVDVSHQFPEL
MKLNKFIRANEAILDGELIVLKDNKPSYRSIMMRKHQQNKLKIDFMSKSYPAIFITWDIL
YVDGKELLNRPLIERKQMLNKFVNECSIMRISDFIFEHGKTLFEETDKKRLEGVMAKKAD
SKYYLGKRSSLWQKFKHHIVLNAVILGYRIDKTALVLGLYNEEDKLIHIGNVESGISQKE
LSSFLDVANDLKVNPEFYGLGINNVQWIMPLIVCKVKFMEWSENFKMRAPSFLEFALDVK
PTECRFM
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgatggatgaaaaaattccacctatgctggcagtatcaggccaagtatttgat
gacccagattggctgtatgagataaaatgggatggttcaaggactctggcattcctttca
tctacaacgagactgcaggatagaagacttgtggatgtaagtcatcaatttccagaactc
atgaagctaaacaaatttatcagggctaatgaagcaatacttgatggtgaattaatagtc
ttaaaagacaataagccaagttatagaagcataatgatgcgcaaacaccagcaaaacaaa
ctaaaaatagattttatgagcaagtcttatcctgccatatttattacttgggatatactt
tatgttgatggaaaagagcttttgaatcggccgttaattgagcgaaagcaaatgttaaat
aaatttgtaaatgaatgcagcataatgcgaatatcagactttatatttgaacatggtaag
actttatttgaagaaactgataaaaaacgactggaaggtgttatggccaaaaaagcagac
tcaaaatattacttaggaaaaagaagtagtctgtggcaaaaattcaaacaccacatagta
ctaaatgctgtaatattaggttataggatagacaaaactgcgttagttttaggcctttac
aacgaggaagacaaacttatacacattggtaatgtagaatctggaatatcgcaaaaagaa
ttatcatcgtttttagatgtcgccaatgatctgaaggtcaaccctgaattttacggtctt
ggcattaacaacgtccagtggattatgccactaattgtatgtaaagttaaatttatggag
tggtcagagaatttcaaaatgagagcaccatctttcttagaatttgccttagatgtgaaa
cctaccgaatgcagattcatgtaa
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