Thermoproteus tenax: TTX_1883 Help Entry TTX_1883          CDS       T01641                                  Symbol lig1 Name (GenBank) DNA ligase   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism ttn  Thermoproteus tenax Pathway ttn03030   DNA replication ttn03410   Base excision repair ttn03420   Nucleotide excision repair ttn03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ttn00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     TTX_1883 (lig1)    03410 Base excision repair     TTX_1883 (lig1)    03420 Nucleotide excision repair     TTX_1883 (lig1)    03430 Mismatch repair     TTX_1883 (lig1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ttn03032]     TTX_1883 (lig1)    03400 DNA repair and recombination proteins [BR:ttn03400]     TTX_1883 (lig1) Enzymes [BR:ttn01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      TTX_1883 (lig1)     6.5.1.6  DNA ligase (ATP or NAD+)      TTX_1883 (lig1)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      TTX_1883 (lig1) DNA replication proteins [BR:ttn03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     TTX_1883 (lig1)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      TTX_1883 (lig1) DNA repair and recombination proteins [BR:ttn03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      TTX_1883 (lig1)    NER (nucleotide excision repair)     Other NER factors      TTX_1883 (lig1)    MMR (mismatch excision repair)     Other MMR factors      TTX_1883 (lig1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase LZ3wCH DNA_ligase_OB_2 Motif Other DBs NCBI-ProteinID:  CCC82500 UniProt:  G4RLQ5 LinkDB All DBs Position complement(1632272..1634050) Genome browser AA seq 592 aa AA seqDB search MEFSELAKVLAGIESTTQRTMMVKLLVNLFKKLGPDEIDKAIYIILGDVRPPWEGVELGI AEKLCLRALSRASGVKLEELESLYQKTGDVGEAARKALSKRQAQTLLAFAGAKRAPLSIS QVYDTFLKIARTTGEGSIDLKVSLLSSLFSQASPEEAKYIARFVVGKLRLGVADMTIIDA LAEAFNVDEGQLEKAYNIHPDLGYLAKVVLERGQAGLAQVRVTPGVPVMPMLAQRLSTSH EVLTKLGGAAICEYKYDGERAQIHIGPNGISIYSRRLENITHAYPDVVEAVRRSVSAKEA IIEGEIVALDPDTGDILPFQELMHRKRKHEVEEAMREYPVKLNLFDVIYLDGEDLTDKPL IYRRLKLSEIVRESEDVVIAKWALFDDEEKVDLFFHEAISMGMEGLVCKSPTSLYEMGAR GWNWIKYKRDYRSEMSDTVDLVVVGAFYGRGKRAGLYGAFLMAAYDPKTDMFYTVCKVGS GFTDADLKKMYQMLEPYKIDHRHPRVSSRMEPDVWFTPGIVLEIIGAEITLSPLHTCCQG AIKPDVGLAIRFPRFTGRYRSDKGPEEATTVDELLEIYRNQKKVKLEGPATT NT seq 1779 nt NT seq  +upstreamnt  +downstreamnt atggagttctcggagttggccaaagttctggcgggcatagagtccacaactcagaggact atgatggtgaagctgcttgtgaacctctttaagaagttgggccccgacgaaatagacaag gccatatacattatactgggggacgtgaggccgccctgggagggcgtagagttgggcatc gccgagaagctgtgtctgagggcgctctctagggcgtccggcgtcaagctcgaggagcta gagtcgctgtatcagaagacgggggacgtcggcgaggccgccagaaaggcgctctccaaa aggcaggcgcagacgctgttggcgttcgcaggcgccaagagggcccccctctctatctca caagtctacgacacgtttttgaagatagcgaggaccaccggagaggggtcgatagatcta aaggtctccctcctctcgtcgctcttctctcaagcctcgccggaggaggccaagtatata gccagattcgtggtgggcaaactgcgcttgggcgtcgcagatatgaccataatcgatgcc ctagccgaggccttcaacgtagacgaggggcaactggagaaggcctacaatatacatccg gacctcggctatctggccaaggtagtcctcgagagaggacaggccggcctcgcgcaagtg agagtcacgcccggcgtgcccgtgatgcccatgttagcccagaggctgagcacgtcgcac gaggtcttgaccaagctggggggcgctgcaatatgcgaatataaatacgatggagagagg gcgcagatacacattggcccaaacggcatctccatctacagccgccgcctggagaatata acacacgcgtaccccgacgttgtggaggctgtgaggcgctctgtctcggccaaggaggcg ataatcgagggcgagatcgtcgcgctggaccccgacactggggatatcctgcccttccaa gagctcatgcacagaaagaggaagcacgaggtggaggaggcaatgagggagtacccggtg aagcttaacctgttcgacgttatctacctagacggagaggatctgaccgacaaacccctc atctaccgacgcctcaagctctccgagatagtcagagagagcgaggacgtagtaatagcc aaatgggctttgttcgacgatgaagagaaagtggatctgtttttccacgaggcaatctcg atgggcatggagggcctcgtctgtaaatctccgacctcactctacgagatgggggcccgg ggctggaactggataaaatacaagcgcgattaccgaagcgagatgagcgacacagtagat ctagtggtagtgggcgccttctacggcagagggaagagggccggtctctacggagccttc ctcatggcggcctacgatcccaagaccgacatgttctacactgtgtgtaaagtgggcagc gggttcactgacgcagatctgaaaaagatgtaccagatgttggagccctacaaaatagac cacagacatcctcgggtttcgtcgcgtatggagcccgacgtctggttcacgcctggcatc gtccttgaaataataggggccgagatcacgctctcgccgttgcacacgtgctgtcaaggg gccataaagccggacgtagggcttgccatcagatttcccagatttactggccgctatagg tcggacaaggggcctgaggaggccaccacagtggacgagcttctggagatatacaggaac cagaaaaaggttaaactggaggggcctgctacgacttaa

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