Thermoproteus tenax: TTX_1980
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Entry
TTX_1980 CDS
T01641
Name
(GenBank) DHH family protein, putative single-stranded DNA-specific exonuclease (RecJ-related)
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ttn
Thermoproteus tenax
Pathway
ttn03410
Base excision repair
ttn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ttn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TTX_1980
03430 Mismatch repair
TTX_1980
03440 Homologous recombination
TTX_1980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttn03400
]
TTX_1980
DNA repair and recombination proteins [BR:
ttn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TTX_1980
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TTX_1980
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TTX_1980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
UIM
Motif
Other DBs
NCBI-ProteinID:
CCC82594
UniProt:
G4RLZ9
LinkDB
All DBs
Position
complement(1727411..1728448)
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AA seq
345 aa
AA seq
DB search
MPPERAVGRGFESHRARSLLSGELVGCMRMTILAHGDSDGVCSAALLKAAYSGIYDQIDV
YFTHPAGLLGDFKEYAKGDVYIVDVAIDEWAAPEILRAFEEYRGRIVYIDHHPPPSSFSP
PPNVEIFHKLGAAASELAFRYVEGLLPETYDRVALYGAIGDYLDNTDWVEEALGRWDKRV
IYFEAGVLSQGLEGARRLHDLKRDIVRHLSENKPPSSHEELLARAIEQSRQNERLAQWVP
NNIVREGLVAYVIDPPGPLGLAATLAKGTAKVPVGIALETRKDIYVLSLRSSGFDLNEFL
RDFSRRYRVPAGGHPSAAGARLPKDLFKTLLNELNYSLRRKGFPS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
ttgccgccggagcgagccgtaggtcgtgggttcgaatcccaccgggcccgtagcttatta
agcggagaactagtcggctgtatgcggatgactatattagcccacggggactccgacggc
gtatgttcagcagctctgctcaaggctgcctattccggcatctacgaccagatagatgtg
tacttcacgcatccggccggccttctcggcgactttaaggagtacgccaagggcgatgtg
tatatagtagacgtcgctatagacgagtgggcggcgcctgagatactgagggccttcgag
gagtaccgcggacgcatcgtctacatcgaccaccacccgcctccatcgagcttttctcct
cctccgaacgtcgagattttccataaactgggcgccgccgcttcggagctagcctttaga
tatgtcgagggcctcctgcctgagacatacgaccgcgtggccctctacggagccatcggc
gattaccttgataacaccgactgggtcgaggaggcgctaggccgttgggataagcgcgtt
atatacttcgaggcaggcgtcctctctcagggcctcgagggggccaggcggctccacgat
ctgaagagagatatcgtgagacatctttctgagaacaagcctccgtcctcccacgaagag
ctcctggctagagccatagagcagagtagacagaacgagagactagcccagtgggtaccc
aacaatatcgtacgcgagggactcgtggcatatgtgatagatccgccaggcccgttgggg
ctcgcggcaacattggcgaagggcacggccaaggtgcctgtcggaatagctttggagacc
aggaaggatatatacgtattgagcctccgctcctcaggcttcgacttaaacgagttcctc
agagatttctcgcggcgatatagggtccctgccggaggccatccgagcgcggcaggcgcc
cgcttgccaaaagacttgttcaaaacgcttctcaacgagctcaactactctttaaggcgg
aagggcttcccctcgtag
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