Thermothielavioides terrestris: THITE_2080045
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Entry
THITE_2080045 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
THITE_2080045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttt03400
]
THITE_2080045
Enzymes [BR:
ttt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
THITE_2080045
DNA repair and recombination proteins [BR:
ttt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
THITE_2080045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
DNA_ligase_IV
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
11520347
NCBI-ProteinID:
XP_003655434
JGI:
Thite2_2080045
UniProt:
G2RBC7
LinkDB
All DBs
Position
4:complement(join(1995256..1998271,1998337..1998443))
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AA seq
1040 aa
AA seq
DB search
MSSRTKRAKSPDVDAIEEDEKQYGSGPLTLEELDEQFPNRPRNHSKTPPFSDLFQSLFNP
LIDCKPSTAGAASAPARARARARAGPSFSSSSSSTKLSYHEQRRHIIERFMARWRADVGP
DFYPAMRLILPDKDRDRGVYGLKENTIGKLLVKVMKIDRNSEDGYALMHWKLPGHAGGGG
GRFGGGAGGGGGGGSRGSAGDFAGRCFEIVSKRQMRTEPGNFTIGEVNVMLDRLAGASGE
AEQLPIFEEFYQGMNAEELMWLVRIILKDMKVGATERTFLGLWHPDAEALFSVSSSLRRV
CWELYDPEFRLEQQETGVTLMSCFQPQLAQFQMTTTFAKLVANLGVTEENPEFWIEEKLD
GERMQMHMQEDDSVPGGYRFAFWSRKAKDYTYLYGSGLEDDNSALTRHLKNAFHSGVRNL
ILDGEMITWDPEVDKIVPFGTLKTAALEQQKNPFQNGPRPLYRVFDILLLNDKSLTEYTL
ADRHRALERAVKGEPRRLEIHPYETATSADAIEPLLRKVVAEASEGLVLKNPRSRYQLNS
RNNDWIKVKPEYMSEFGESLDCVVIGGYYGSGRRGGTLSSFLCGVRVSENFVKSGAAASR
EKCLSFCKVGGGFKAEDYGEIRHHTEGKWRDWDAANPPSEFIELGGGERLQYERPDVWIR
PSESVVLSVKAASFAPSDQFATGWTLRFPRFRKLRLDKAWDAAMDVDECEALRTKVKQEE
KERKAMEMESRKRRPTKRQKRELVIAGAADPAATAATATATAEFLDVKTPRSELFRGLDF
CVLSEMLRPRKMTKPELEKLLKENGGRIHQTVDKGSGMILLADKNVVKVASLKKAGDADI
VRPKWVLDCLEQGGGEGYLLPFEEGHLLFATEEMRRVAEENTDQYGDSYARDVGIDELRA
ILDAMDMPDGGGAEFDVSQFLDQLEEHGNGLEDLKSFMFRRCRMYFALGDGVPETTALRL
GNYVKFGSGEVADGVEDEKITHVVVVGGEQDTAASEKVLAADVRYRVSSRRAVPRIVSSR
WVEDCWKEGTLVDEEAYAPN
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagaaccaagcgcgccaagtccccggacgttgacgcgatagaagaagatgag
aagcaatatggcagcggcccgctcacgctggaagagctcgatgaacagttccccaaccgc
ccacgcaaccactccaaaacaccgcccttctccgacctcttccagtccctcttcaacccc
ctgatagactgcaagccgagcacggcgggcgcggcctcggcgcccgcccgcgcccgcgcc
cgcgcccgcgccgggccctccttttcctcctcctcgtcctccaccaagctatcctaccac
gagcagcgccggcacatcatcgagcgcttcatggcgcgctggcgcgccgacgtcggcccg
gacttctacccggccatgcgcctcatcctgccggacaaggaccgcgaccgcggcgtctac
ggcctcaaggagaacaccatcggcaagctgctcgtcaaggtcatgaagattgaccgcaac
tcggaggacggctacgcgctgatgcactggaagctgcccggccatgccgggggtggtggc
ggcaggtttggcggtggtgctgggggtggtgggggtggcgggagtagggggagtgcgggc
gactttgcggggcggtgttttgagatcgtgagcaagcggcagatgaggaccgagccgggg
aattttacgattggggaggtgaatgtgatgctggatcggctggctggggccagtggcgaa
gccgagcagctgccgatattcgaggagttctatcaggggatgaatgcggaggagctgatg
tggctggtgaggattatcctgaaggatatgaaagtcggcgcgaccgagcggacgttcctt
gggctgtggcatcccgacgccgaggcgctgtttagtgtctcgtcgagcttgaggcgggtg
tgctgggagctttatgaccccgagttccggctggagcagcaggagacgggcgtcacgctc
atgtcgtgcttccagccgcagctggcgcagttccagatgacgaccacattcgcgaagctg
gtcgcgaacttgggcgtcacggaggagaatcccgagttctggatcgaggagaagctggac
ggggagaggatgcagatgcacatgcaggaggacgacagcgtcccgggcggctataggttt
gccttctggtcgcgcaaggccaaggactacacgtacctgtacggcagcgggctagaagac
gacaactcggcgctcacgaggcatctcaagaacgccttccatagcggggttcgcaacctg
atcctcgacggcgagatgatcacttgggaccccgaggtcgacaagatcgtgcccttcggc
accctcaagacggctgcgctcgagcagcagaagaacccttttcaaaacggcccgcggccg
ctgtaccgcgtcttcgacatcctcctgctcaacgacaagtccctcacagaatacaccctc
gccgatcggcaccgcgccctcgagcgcgccgtcaaaggcgagccccgccggctggaaatc
cacccctacgagaccgccacctcggccgacgcgatcgagccgctcctccgcaaagtggtc
gccgaggcctccgagggcctggtcctcaagaacccgcggtcccggtaccagctcaacagc
cgcaacaacgactggatcaaggtcaagcccgagtacatgtccgagttcggcgagtcgctt
gactgcgtcgtcatcggcggctactacggctcgggccggcgcggcggcacgctgtcgtcc
ttcctgtgcggcgtgcgcgtcagcgagaacttcgtcaagtccggcgcggcggccagccgc
gagaagtgcctcagcttctgcaaggtcggcggcggcttcaaggcggaggactacggcgag
atccggcaccacacggagggcaagtggcgcgactgggatgcggcgaacccgccgtccgag
ttcatcgagctcggcggcggcgagcggctgcagtacgagcggccggacgtgtggatccgc
cccagcgagtcggtcgtgctctcggtcaaggccgcctcgttcgcgccgtcggaccagttc
gccaccggctggaccctgcgcttcccgcgcttccgcaagctgcgcctcgacaaggcctgg
gacgccgccatggacgtcgacgagtgcgaggccctgcgcaccaaggtcaagcaggaggag
aaggagcgcaaggcgatggagatggagagccgcaagcgccggccgaccaagaggcagaag
cgggagctggtcatcgcgggcgcggcggacccggcggcgacggcggcgacggcgacggcg
acggccgagttcctggacgtcaagacaccgcgcagcgagctgttccgcgggctggacttc
tgcgtgctgtccgagatgctcaggccgaggaagatgaccaagccggagctggagaagctg
ctcaaggagaacggcggcaggatccaccagacggtggacaaggggtccggcatgatcctc
ctggcggacaagaacgtcgtcaaggtggccagcctcaagaaggccggcgacgccgacatt
gtgcgccccaagtgggtgctcgactgtctggagcagggcggcggcgagggctatctgctt
ccgttcgaggagggccacctgctcttcgccaccgaggagatgaggcgggtcgccgaggag
aacacggatcagtacggggacagctacgcgcgagacgtcgggatcgacgagctgagggcg
atcctggacgcgatggacatgcccgacggcggcggagccgagtttgacgtcagccagttc
ttggaccagctggaggagcacggcaacggcttggaggacctcaagagcttcatgtttagg
aggtgccgcatgtactttgcgcttggggatggcgtgcccgagacgacagcgctcaggctg
ggcaattacgtgaagtttgggagcggcgaggtggcggacggtgtggaggacgagaagatc
actcacgtggtcgtcgtcggcggggagcaggacacggcggcttcggaaaaggtgctggcg
gcggatgtgaggtacagggtcagctcgaggagagcggtgccgcgcattgtctcgtcgagg
tgggtcgaggactgctggaaggagggtacgcttgtggacgaggaggcgtatgcgcctaac
tag
DBGET
integrated database retrieval system
