Thermothielavioides terrestris: THITE_2121633
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Entry
THITE_2121633 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
THITE_2121633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2121633
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
THITE_2121633
U7-dependent histone pre-mRNA processing factors
THITE_2121633
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
L1R_F9L
Spo7_2_N
Motif
Other DBs
NCBI-GeneID:
11522779
NCBI-ProteinID:
XP_003656670
JGI:
Thite2_2121633
UniProt:
G2RF51
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All DBs
Position
5:complement(join(1960457..1961158,1961249..1961367,1961448..1961573,1961635..1961686))
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AA seq
332 aa
AA seq
DB search
MSTRQPSRVVFVGNIPYGLTEEQITELFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYD
SAASAVRNLNDHEVMGRKLRVDFSNETVSDDDNRDRDGATGAGASSTYANPSTTNGNSAA
AGPGAGGFSSSTSTTLPPLPQGKDLPPGVTCTDAISRTLNTLPPAQLLDILQQMKTLATS
DPARATELLAQAPQLSYAVFQALLIMGLVTPEAITSVLEPPTAATAAAATAAGGVGMGLG
VGVGTGTPPVVAPVAGAAAGGYAPPLSAAAPAPVPVPPAPAAAQAPPPVAQDPEALMRAV
MELPQETIDQLPETERQQIMALRASYAAQTRR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccgacagccgtcccgggtcgtgtttgtgggcaatatcccctatggcttgacc
gaagagcaaataacagagctcttcagcggcgctgggagggtgttgaacttccgccttgtc
tacgaccgcgagaccggccgtcctaagggcttcggctttgcggaattcccagattacgac
tcggccgcatcagccgtccgaaatctgaacgaccacgaagtcatgggccgcaagctgcgc
gtcgatttcagcaacgagacggtcagcgacgacgacaatcgcgaccgcgatggagcaacc
ggcgccggcgcatccagcacctacgccaacccctccaccaccaacggcaacagcgcggcc
gccggtcccggcgcaggcggcttctcctcctccacctccaccaccctcccgccgctgccg
cagggcaaggacctgccgccgggcgtgacgtgcacggacgccatctcgcgcacgctcaac
acgctaccgcccgcgcagctgctcgacatcctgcagcagatgaagacgctggcgaccagc
gacccggcgcgcgccaccgagctgctcgcccaggccccgcagctcagctacgccgtcttc
caggccctgctcatcatgggcctggtcacgcccgaggccatcacctccgtgctcgagcct
cccaccgccgccactgctgctgctgctactgctgccggtggcgtagggatggggctgggc
gtcggcgtcgggacgggcacgccgcccgtcgtggcgccggtggcgggtgctgctgctggt
ggctatgcgccgcctctgtccgctgctgctcctgctcctgttcctgtcccccctgctcca
gcggcggcccaggcgccgccaccggtggcgcaggacccggaggcgctgatgcgcgcggtc
atggagctgccgcaggagacgatcgaccagctgccggagacggagaggcagcagatcatg
gctctgcgggcgagctacgcggcgcagacgcggcgttag
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