Thermothielavioides terrestris: THITE_2122946
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Entry
THITE_2122946 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K10865
double-strand break repair protein MRE11
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03440
Homologous recombination
ttt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THITE_2122946
03450 Non-homologous end-joining
THITE_2122946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttt03032
]
THITE_2122946
03400 DNA repair and recombination proteins [BR:
ttt03400
]
THITE_2122946
DNA replication proteins [BR:
ttt03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
THITE_2122946
DNA repair and recombination proteins [BR:
ttt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
THITE_2122946
BRCA1-C complex
THITE_2122946
NHEJ (non-homologous end-joining)
MRX complex
THITE_2122946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Metallophos_2
DUF6279
Motif
Other DBs
NCBI-GeneID:
11523148
NCBI-ProteinID:
XP_003657357
JGI:
Thite2_2122946
UniProt:
G2RGD6
LinkDB
All DBs
Position
6:complement(join(238823..239772,239835..241067,241189..241204))
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AA seq
732 aa
AA seq
DB search
MPPAPEADTIRILVSTDNHVGFEERDPIRKDDSWRTFDEIMQLARTRDVDMVLLGGDLFH
DNKPSRKAMYQVMRSLRKNCLGMKPCELEFLSDAAEVFEGAFPHVNYQDPDINISIPVFS
IHGNHDDPSGDGHFCSLDLLQVAGLVNYFGRVSEADNIHVKPILLQKGKTKLALYGLSNV
RDERMHRTFRDNKVRFYRPNQQKADFFNLLVLHQNHYAHTPTSYLPENMLPDFLDLVIWG
HEHECLIDPQRNPETGFHVMQPGSSVATSLVPGEAATKHVAVLKITGKTFEVEKIPLKTV
RPFVTREIVLANDKRFKGLEKKQDNRQDITKRLMLIVEEMIEEANAAWQSIHGGDDELDI
DEQQPLPLIRLKVEYTAPDGAKFEVENPQRFSNRFAGKVANQNDVVYFYRKKTGTARKTK
DMKALPAGVAENLGSMDTIKVDTLVQEFFAQQSLKILPQAQFGDAVNQFVSKDDKHAIEM
FVMDSLSAQVKGLLQLDSDKITEGLDSHIEEFRKVMEQNFISGQQKQAQRKRRFKERPEH
WDSDLDGHWTAQADAIEEVPGSPDPAISRPGRARPTSGVASNDEDGELFGEEPAAGAAAP
RRTATAATGTSKRAASAQKTAAPARKAAAPKKAPARGRRKVNPFHDSDDEEEEEDVIMED
DDAEPEPPARAPPPKPTRETRARGPAKTRQTTLNFSQSQKPKAAQNAIEISDDEISDDDA
FESMPQTRSRRR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggccccagaggcagacacaatccgcattctagtctcaaccgataatcatgtt
ggcttcgaggaacgagacccaatccgcaaggatgacagttggcggacctttgacgaaatc
atgcagctcgcccgcactcgggacgtcgacatggtgctcctcggcggcgatcttttccac
gataacaagccgtcccgcaaggccatgtaccaggtcatgcgctcgctccggaagaactgc
ctcggcatgaagccttgcgagctcgagtttctcagcgacgccgccgaggtctttgagggc
gccttcccacacgtcaactaccaggaccccgacatcaacatctccatccccgtgttctcg
atccacggaaaccacgacgaccccagcggcgacggccacttctgctccctggacttgctg
caggtggcggggctggtcaactactttggccgcgtgtccgaggcagacaatatccacgtg
aagccgatactgctgcaaaagggcaagacgaagcttgccctgtacggtctgagcaacgtg
cgcgatgagcgcatgcaccgcacattcagagacaacaaggtcaggttttacaggccaaac
cagcaaaaggccgacttcttcaacctgctggtgctgcaccaaaaccattacgcgcacact
cctaccagctacctgcccgagaacatgctgccagacttcttggacctcgtcatctggggc
catgagcacgagtgtctcattgatccccagcggaaccccgaaaccgggttccacgtcatg
cagccaggctcgtcggttgccacatccctggttcccggcgaagctgccaccaagcacgtt
gcagtcctcaagatcacgggtaagaccttcgaggttgagaagattcccctcaagacggtc
cggccttttgtcactcgggagatcgttctggccaatgacaagcgcttcaaggggctggag
aagaaacaggacaatcgtcaagatatcacaaagcggctcatgttgattgtggaggaaatg
atcgaggaggctaatgcggcttggcaatcaatacacggcggggatgatgagttggacatc
gacgagcagcagccgttgcctctgatccggctcaaggtggaatacacagcccccgacggc
gcaaagttcgaggtcgaaaatcctcagcgcttctccaacaggttcgctgggaaggtggca
aaccagaacgacgtcgtctacttttaccgcaagaaaacggggacagcaaggaaaaccaag
gatatgaaggcactccccgcgggcgtggcggaaaatctcgggtccatggatacgatcaaa
gtcgacacgctggtgcaggagttctttgcccaacaatcactcaagatcctgccgcaagcg
cagtttggagacgcggtcaaccagtttgtcagcaaggacgacaagcacgcgatagaaatg
tttgttatggattcgctctctgcccaggtcaaggggctgctgcagctggacagtgacaag
attaccgagggtctcgactctcatatcgaggaattccggaaagtcatggagcaaaacttc
atctcgggccagcaaaagcaagcacagcggaaaaggaggttcaaagagaggccggaacac
tgggactcggacctggatggtcactggacagctcaggcggacgcgatcgaagaggttccc
gggtccccggatcctgccatcagccggccgggccgtgcccggcccacctccggggttgcg
tccaatgatgaggatggcgagctgttcggtgaggagcctgcagcaggagccgctgcgcct
cggcggacggcgactgcagctacaggaacgtcgaagagggcagcctctgcccagaagaca
gcggctcctgcaaggaaggcggccgctcccaagaaggctcctgcgcgtggtcgcaggaaa
gtgaacccattccacgacagcgacgacgaagaagaagaggaagacgtgatcatggaagat
gacgatgccgagccagagcctcctgccagagcgccaccccccaagcccacgcgggagact
cgggcccgaggacctgccaagactcgccaaaccacactgaacttctcgcaatcccagaag
ccgaaagcggcgcagaacgcaattgagatcagcgacgacgagatttctgacgatgatgcg
ttcgagtcgatgccacagacgagaagcaggcggcgttga
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