Thermothielavioides terrestris: THITE_75273
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Entry
THITE_75273 CDS
T02228
Name
(RefSeq) histone deacetylase-like protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ttt
Thermothielavioides terrestris
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ttt01009
]
THITE_75273
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_75273
04131 Membrane trafficking [BR:
ttt04131
]
THITE_75273
03036 Chromosome and associated proteins [BR:
ttt03036
]
THITE_75273
Enzymes [BR:
ttt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
THITE_75273
Protein phosphatases and associated proteins [BR:
ttt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
THITE_75273
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
THITE_75273
Membrane trafficking [BR:
ttt04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
THITE_75273
Chromosome and associated proteins [BR:
ttt03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
THITE_75273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arb2
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
11522052
NCBI-ProteinID:
XP_003657668
JGI:
Thite2_75273
UniProt:
G2RHM0
LinkDB
All DBs
Position
6:complement(join(1345853..1346220,1346350..1346524,1346592..1346684,1346755..1346818,1346894..1348479))
Genome browser
AA seq
761 aa
AA seq
DB search
MEDLDNDVVMDGEDHHMAEGPSTANGFLDTTTGESSLQTTNGNSADGTMQDEDQDADPTA
YPERLRRRGLLPTGCCYDDRMKLHANADFGPNPHHPEDPSRIECIMKTFKQAGLVFTGSD
AELIRIIQTEPTKYMWRIPARAATKEEICTVHHPAHYMWVEELSRMSTHELRKLSKEKDQ
GRDSLYVGSMTYEASLISAGGAIETCKSVVAGIVKNAFAVIRPPGHHAEFDTPMGFCLFN
NVPIAAKICQADYPDLCRKILILDWDVHHGNGIQNLFYDDPNILYISLHVYRNGEFYPGQ
PDNPMTPDGGLEHCGAGPGLGKNVNIGWHDQGMGDGEYMAAFQKIVMPIAHEFNPDLVII
SAGFDAAAGDELGACFVTPGCYAHMTHMLMSLAGGKVAVCLEGGYDLEAISKSALAVAQT
LMGEPPPKMEIPRISREAAKVLAKVQAYQAPYWECMRPGIVDVQELQAQDSSRLHDVVRS
AQRQVLSQKHGMLPLYIQRDVLFKSFENQVLVTRDIHAARKILVIVHDPPELHAQPDPLD
NTVEPHNAWVTDGVTRYIDWAISKGFGVIDVNVPHYITHPGDTEPYIPGADERTLQAQIQ
ELMCYIWDNYLQLSESADDIFLMGVGNAYLGIKMLLINRLDVKSRVAGVVNFVNGSLRPV
KSDADADLSSWYKDNSQVYVANDHACWADPDLTRKVMKRRFGNVIRSPANGLTPMMTEHF
ADVQQFFADRALGDGEGEGEGEGEGEGEDVGGKVEGGMRIG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcttgacaacgatgttgtcatggatggtgaggaccaccacatggcagagggc
ccgtccaccgccaacggctttctagataccacgacaggggagagctcgctgcagacaacc
aacggcaacagcgcagatggcaccatgcaggatgaagatcaggatgccgacccgacagca
tatcccgaacgcctgcgccggcgcggcctgcttccgacggggtgctgctatgatgaccgc
atgaagctgcatgccaacgctgactttgggccaaatccccatcacccagaggatccttct
cggatcgaatgcatcatgaagacgttcaagcaggccggcctggtgttcaccggctccgat
gccgagcttatccgtatcatccagacggagcccacgaagtacatgtggcgcattcctgcg
cgagcggcgacgaaggaggagatctgcaccgtccaccatccggctcactacatgtgggtt
gaagagctgtctcggatgtctacacacgagctccgcaagctctccaaggaaaaggaccag
gggcgggactcgctgtatgtcggcagcatgacatacgaggcttcgctgatctcggccggc
ggcgccatcgaaacctgcaagagcgtggttgccggcatcgtcaagaacgctttcgccgtt
attcggccgccgggacaccatgccgagttcgatacgccaatggggttctgcctgttcaac
aacgtgcccatcgctgccaagatctgccaggccgactacccggacttgtgccgcaagatc
ctcatcctcgactgggacgtgcaccacggcaacggcatccagaacctcttctacgacgac
ccgaatatcctctacatctcgctccatgtctatcgcaacggcgagttctaccccggccag
ccggacaatccgatgacgccggacggcggtctcgagcactgcggcgccgggccgggcctg
ggcaagaacgtcaacatcggctggcacgaccagggcatgggcgacggcgagtacatggcc
gccttccagaagatcgtcatgccgatcgcgcacgagttcaacccggacctggtcatcatc
tcggcgggcttcgatgcggccgccggagacgagctcggcgcctgcttcgtcacgcccggc
tgctacgcccacatgacgcacatgctcatgtcgctcgccggcggcaaggtggccgtctgt
ctggagggcgggtacgacctcgaggccatctccaagtcggccctggccgtggcgcagacg
ctcatgggcgagccgccgccgaagatggagatcccccgcatcagccgggaggcggccaag
gtgctggccaaggtgcaggcctaccaggcgccctactgggagtgcatgcggcccggcatc
gtcgacgtccaggagctgcaggcgcaggactcgtcgcgtctgcacgacgtcgtccgctcg
gcgcagcgccaggtcctgtcgcagaagcatggcatgctgccgctgtacatccagcgtgat
gtgctgttcaagtcgttcgagaaccaggtgctggtgaccagggatattcacgcagcgcgc
aagattctggtcattgtgcacgacccacctgagctgcatgctcagcctgacccgctagac
aacacggtcgagccgcataacgcttgggtgacggacggcgtcactcggtacattgactgg
gccatcagcaagggcttcggcgttatcgacgtcaacgtcccgcactatatcacgcatcca
ggggacactgagccctacatccccggcgcagacgagcgcacgctgcaggcgcagattcaa
gagctgatgtgctacatctgggataactacctgcagctctccgaaagcgccgacgatatc
ttcctcatgggcgtcggcaacgcctacctcgggatcaagatgttgctgattaacagactc
gacgtcaagtcccgtgtcgcgggcgtagtcaacttcgtcaacggcagcctgcggccggtc
aagtcggacgccgacgccgacctgtcgtcgtggtacaaggacaactcgcaggtctacgtc
gccaacgaccacgcctgctgggccgacccggacctcacccgcaaggtcatgaagcgccgc
ttcggcaacgtcatccgcagccccgccaacggcctcacgcccatgatgacggagcacttt
gccgacgtgcagcagttctttgcggatcgcgcgctcggtgacggtgagggcgagggcgag
ggcgagggggaaggggagggggaggacgtggggggaaaggtagagggggggatgcggatc
gggtaa
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