Tepidimonas taiwanensis: LCC91_13525
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Entry
LCC91_13525 CDS
T07546
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ttw
Tepidimonas taiwanensis
Pathway
ttw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ttw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCC91_13525 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttw03400
]
LCC91_13525 (xth)
Enzymes [BR:
ttw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LCC91_13525 (xth)
DNA repair and recombination proteins [BR:
ttw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LCC91_13525 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UBQ05503
LinkDB
All DBs
Position
2859718..2860509
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AA seq
263 aa
AA seq
DB search
MLTVTTLNLNGIRSAASKGLADWVAAAAPDLLCVQELKAQPQDLAGRFDTLAGLRGHFHC
AARKGYSGVGIYSRHEPSDVVVGIGVPEFDDEGRYVELRFDTPAHKRSVVSVYFPSGSSG
DERQQAKFRFLDEIAPQLARLAATRECLVCGDINIAHTERDLKNWRSNQKNSGFLPEERA
WMTRLLADGAWVDVYRRLYPDAGEEGYTWWSNRGQAWAKNVGWRIDYHLATPGWAAAARD
ATIYKAQRFSDHAPLTVTYALGL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccgtcaccaccctcaacctcaacggcatccgctcggccgccagcaaggggctg
gcggactgggtggctgccgccgcccccgatctgctgtgcgtgcaggagctcaaggcgcag
ccgcaggacctggccgggcgcttcgacacgctggccgggttgcgcggccattttcactgc
gcggcgcgcaaaggctactcgggcgtcgggatctacagccggcacgagccgagcgacgtc
gtcgtcggcatcggcgtgcccgagttcgacgacgaggggcgttacgtcgagctgcgcttc
gacacgcccgcgcacaagcgcagcgtggtgagcgtctatttcccgagcggctcctccggc
gacgaacggcagcaggcgaagtttcgctttctggacgagatcgcgccgcagctggcgcgg
ctggccgcgacgcgcgagtgcctggtgtgtggcgacatcaacatcgcgcacaccgagcgg
gacctgaaaaactggcgcagcaaccagaaaaacagcggctttctgcccgaggaacgggcg
tggatgacgcggctgctcgccgacggggcctgggtcgacgtgtaccgccgcctgtacccg
gatgccggcgaggagggctacacgtggtggagcaaccgcggtcaggcgtgggcgaagaac
gtcggctggcgcatcgactaccacctggccacgccgggctgggccgcggcggcgcgcgac
gccaccatctacaaggcgcagcgcttcagcgaccacgcgccgttgacggtgacgtacgcg
ctcgggctgtga
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