Tenuifilum thalassicum: FHG85_13155
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Entry
FHG85_13155 CDS
T06728
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
ttz
Tenuifilum thalassicum
Pathway
ttz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ttz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FHG85_13155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttz03400
]
FHG85_13155
DNA repair and recombination proteins [BR:
ttz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FHG85_13155
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
HHH_2
DUF1825
DUF3212
Cdd1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QKG81176
UniProt:
A0A7D3XNT6
LinkDB
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Position
complement(3189979..3191772)
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AA seq
597 aa
AA seq
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MNSIDLPVLSSLPELPGVYQFFDKTGKIIYIGKAKNLKKRVSSYFNRSHFDSAKLRHLVN
SICDLKYIVVNTESDALILENILIKKHQPKYNILLRDDKTYPWIVVRNEPFPRVEVTRNY
SNDGSIFYGPYTSGKFLTTLMDLVKDLYPLRNCNLNLTESNIKANRFKPCLEYQIGNCLA
PCIGNQTSDDYYANIKEIKKVLSGNINQLLKFLQNKMLQASKELRFEEANVLKERIRLLT
NFQSKSSIILKSIKNSAVFTILQNEDIIAINYLNVSGGVVLQSYNMNVRNYLNEPLDEIF
SQAIFEVKSRLNLKLDRILVNILPAFSIPELRITKPRDGEKLNLVKLSLRNAEAYINEIR
RNEEKKNPNLRYIKYLEQLKKDLNLEKLPEHIECFDNSNLQGTNPVSSCVVFKGGKPAKK
EYRHFSIKSVEGPDDFASMREVVKRRYHRLISEDKPLPDLIVIDGGKGQLNAAYQVLVEL
NINHIPIIGIAKRLEEIFRPGDNVPIYLDKRSMSLKIIQQIRDEAHRFGITYHRKKRDKQ
LELSVLENIPGIGKKSVQKLYMKFKSLNKIKQASLSELSEVLGKKTAEKIFNQLKNL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtattgacttgcccgttctatcctcgttgccagaactgccaggtgtctatcaa
ttttttgataaaactggaaagataatttatatcggtaaagccaagaatttaaaaaagaga
gtttcgtcgtattttaatagaagtcactttgattcagctaagttgcgacacctggttaat
agtatttgtgaccttaagtatattgtagtaaatacagagtctgatgcgctcatactggaa
aatattttaattaaaaagcatcaaccaaagtataatatactattaagagatgataaaaca
tatccatggattgttgtacgaaatgagccctttcctagggtagaggttacccgaaactat
tctaatgatggttctattttttatggtccatatacatctggaaaatttttaacaacgtta
atggatctagttaaggatttgtatcccttacgaaattgtaatttaaacctcacagaatca
aatattaaagctaatagatttaaaccttgccttgaatatcaaattggaaattgcttggcc
ccttgtattgggaatcaaacctcagatgattattatgccaatattaaagaaataaagaaa
gttttaagtggaaatataaatcagcttttgaaattccttcaaaataaaatgcttcaagcc
tctaaagagttacgttttgaagaggcaaatgttctaaaagaacgtattagattgcttact
aattttcaatctaaaagttcaatcattttaaaatcaataaaaaattcagccgtgtttaca
attttacaaaacgaagatataattgcaataaattatttaaatgttagcggtggcgttgtt
ttacagtcctataatatgaacgtgaggaattatttgaatgaacctctcgatgaaatattt
tctcaagctatttttgaagtgaaaagtaggttaaatttaaaattagatagaatacttgtt
aacattcttccggcattttctattccagaattaagaataacaaagccacgagatggagaa
aaactaaacttagtaaagttaagtcttagaaatgctgaagcttacattaatgagataagg
aggaacgaagaaaagaaaaatccaaatttaagatacattaaataccttgagcagcttaaa
aaggatttaaatctagagaaattgcccgaacatattgaatgttttgataattcaaactta
cagggaacaaatcctgtttcatcatgtgttgtgtttaaaggagggaaacctgcaaagaaa
gaatacagacatttcagcattaaatcagtagaaggacctgatgattttgcttctatgcgt
gaagtagtaaaacgtcgataccataggctcattagtgaggataaaccgttgcctgatcta
attgtaatagatggtggaaaaggacaacttaacgcggcttaccaggtactagttgaattg
aatataaaccatattcctataataggaattgcaaagcgtttagaagaaatctttcgacct
ggtgataacgtgcctatttatcttgataaacgttccatgtccttaaagataattcaacaa
attagggatgaagctcatcgctttgggattacttatcatcggaaaaagagagacaagcag
ttagaactctcagtactcgaaaatattcctggaatcggtaagaagtctgttcaaaagcta
tacatgaaatttaagtcacttaataaaattaaacaggcaagcctatcagaactttcagaa
gtacttggaaaaaaaacagctgagaaaatctttaatcaattaaaaaatttatag
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