Triticum urartu (red wild einkorn wheat): 125550936
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Entry
125550936 CDS
T08232
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1 homolog
Organism
tua
Triticum urartu (red wild einkorn wheat)
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Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
125550936
NCBI-ProteinID:
XP_048570022
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All DBs
Position
4:110549261..110558484
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AA seq
1860 aa
AA seq
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MRTRFLAADYFSPPSAASCSDQALALASLRFPPLPVPSLPPDPHFPLLLPFPAAADLPAV
SISGDDLDSLPISSALSEFLAAVIPQALPAPAIPAADEGLDDFLYDRGGYRKGFSLRESV
AFEIPDGLDEISREKDGKGDGSRSDRLGTSTDTKRWELLKKHIFEVVEVDLPQILEGHVA
SSGGDESGDGVTLLFRVPDAKIHLDFIDIDTEMTLSYPTELVDSIYQVEKIPVEHNDEEH
LSARNINFLDIAALDCGVTIPLLEVHRHSWELNGCPTKAEISNIFHNLVEHLGEAQVQHS
ALNSTEFSRSTDKDMLAFVSKDAPCADYQADKPITVKAAVEMDLVRISDNLLLERNSALY
PLKPDGTFSDLPCSVLLEEAQIIDFPSEDVFKMFVQSDAAELNTSDEIFKDDFNPARRFY
ESVVSSELVLVDDTFKSLPTPILSDDDMTLRSMVPSMGEVLCSLKTYSLSAADRIYLDWH
LLLEGPCNREICSTYAIMVEEVKSCQFNSEMQVNCQQTSALGFDFLEYFWRSAKHQDEDK
QNNIYVPTPLPHDPPPAVETAQKYRQESDTGGNGHMEKPSSGKAASLFKSMSQSSDINFY
LNVRSGTKRGTNDENISTLDIPTLNEQAASFPSRPKVDKLIEIHPVSLSDSIRALIKHIH
RSYTTALQESAYLRHTFSDGHLSIPKQKLLGLITGDGSDGFDNHCKHEDKMELIVLYGLK
QVAYYLCFFGLHAGHLYISNLIGSFENIPERLRNIHSFIGEALWKAEKHQIDSHPSLHDI
EMILRSNTHTSQQILIVADTTFWLPLGQKLTSMKMTFVELGKDPAAAYLDPVDKPNPTTW
VLRGLPKSDCILLDNKNIPASFPFSEFGIVLEYGGPDKLSTLLSLAPNLDGFPQLHFLYV
KVDVEDPSVALVEDNPTDQELRATLDTVLHALQKDLQEKMNKMRIVDSLNFIPATNQLQG
RQENLCKYSTADSTKKLPADDRLLKQNFLEKEFADAHHFVPTAEQRHREEMLSKRTILHS
QHFVPAVEKSSSTSSVSGNAIKAPQDNLSGTDLPSGVEVGRLTLGRLSTPAIVVNTGSHG
KNMLFSRRSSYQQILSLEKGGMQVVERDVDLPVDLILSTAACLVWFETKIFGSNEFTASA
ETSSITNFVEIIATNILMSISFCFRGCIMVFEGEPHSLSAVMETSDSLYAAAASLMMNVQ
IFFSCTPKLTDEIVLSCIRNVNMLNKAPSPDIPESESLAESFLTKFPSINPLSAYSMLSC
GSSLVEFLSWSHERRIQAVEKYLFSPQSISLFNALCKFGELGESRSVMTEGSSVDSDICS
ALLQSPSKRKRCASQVFAVPTSDPLHPDSLNQLPGDYVEHNNVFSQPKLRRFSDAEDATP
QLPEVFMFNQSLSRGGEGVSCLPRKHNIGAIIGNQIMGDHISNGFTADTRHCNQRRANNM
VDTYDFSWQPESGGKEPIKSSFPASEPSFSRSYSHPIFPSALEINDDTGYWDIPGGAHGT
WKGHVHGGIASTSCRNDVGSRYHEPTEEIMQKGHVHGDIAPTSCRNDVGSRYHEPREEIM
QKGHVHGDIAPTSCRNDVGSRYHEPREEIMQKGHVHGDIAPTSCRNDVGSRYHEPREEIM
QKGHVHGDIAPTSCRNDVGSRYHEPREEIMQKGHVHGDIAPTSCRNDVGSRYHEPREEIM
HDPGSSLAFLKQDSGFHATPHGSSWEIDYLRQMNEKRRAREERSRCNTSAMMSNSRMRDG
VSKIINPPLIGSFRYQGDGDTPSRNRSPSVGTRHYEKAREGTKAHTHRARKDFKMQPSVS
QENRIEPSIYPSWTPVDKRARQKLSFATYGKEKQSKLVWRDPNSSGAECGFRKRYREEGT
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atgcggactcgcttcctcgccgcggactacttctccccgccgtcggcggcctcctgctcg
gaccaagccctagccctagcgtccttgcgcttccctcctctccccgtcccctcgcttccg
cccgatccgcatttcccgctcctcctccctttccccgccgcggccgacctccccgcggtc
agcatctcgggcgacgatctcgactctctccccatatcctccgcgctatctgagttcctc
gcggccgttattccgcaggccctgcccgcgccggctatccccgccgccgacgagggattg
gatgacttcctctacgacaggggcggctatcgcaagggttttagcttgagggagtctgtt
gcattcgaaatccctgatggattggacgagattagccgcgagaaggatgggaagggagac
ggatccaggtcagatagattggggacctccactgacacgaagagatgggaactgctgaag
aagcacatatttgaggttgtagaggttgatctcccgcagattttggaaggacacgttgca
tcctctggtggtgacgagtctggtgatggtgtcaccttattgtttcgtgttccagatgcg
aaaatccacctggatttcattgatattgacactgagatgacattaagctatccaactgaa
cttgtggattcaatttatcaagtagagaaaatccctgtggagcataatgatgaggaacat
ttgtctgcaaggaatattaactttttagacattgcagcattagattgtggtgtgacaata
ccactactggaggttcataggcattcttgggagcttaatgggtgtcccactaaggcagag
atatctaatatttttcataaccttgttgaacatttgggtgaagcacaagttcagcattca
gcgttgaactcaactgagttctcaagatcaactgataaggacatgttggcctttgtttcc
aaagatgccccatgtgcagactatcaagcagataaaccaataacagttaaggctgcagta
gaaatggatcttgtgaggatcagtgataatcttctacttgagagaaactcggcattatac
cctctcaagcctgatggaaccttttcagatttgccttgctcagttcttttagaagaagca
cagatcattgatttcccttcagaggatgtcttcaaaatgtttgttcagtcagatgcagct
gagctgaatacatctgatgaaatattcaaagacgacttcaatccagcaaggcgtttctat
gaatcagtggttagctctgagttggtgctggttgacgatacattcaaatcactacctaca
cctattttatctgatgatgatatgacactgaggtctatggtcccctccatgggagaagta
ctttgctccctgaaaacttattcactctctgcagccgacagaatttatttggactggcat
cttttattggaaggtccatgcaaccgggagatatgctctacctatgcaatcatggttgag
gaggtaaaaagttgccagttcaattctgagatgcaagtcaattgtcagcagacatcagca
cttggttttgattttcttgagtatttttggagaagtgcaaaacaccaagatgaggataaa
cagaacaatatttatgtgcctacccctctacctcatgatccacctcctgcagtggaaacg
gctcaaaaatacagacaagaaagtgatactggaggcaacggccacatggaaaagccaagt
tcaggaaaggcagcttccttattcaagtcaatgtcacaatccagtgacataaatttctac
ttgaatgtcagaagcggcaccaagagaggaactaatgatgaaaatatttctactttagat
atccctactttaaatgaacaagcagcttcttttccaagcaggcctaaagttgacaagctc
atagaaattcatcctgtcagcctctcagattcaatccgagcccttatcaaacacatccat
agaagctatacaactgctctgcaagaaagtgcatatttgaggcatactttctcggatggg
catttaagcattccgaagcagaagcttcttggactgataactggagatggttcagatggc
tttgataatcactgtaaacatgaagataagatggaactcattgtactctatggattaaaa
caggttgcatattatctatgtttctttggtttgcatgctggccatctgtacataagcaac
ctgattggaagctttgaaaatattcctgagaggttaagaaatattcacagtttcattggt
gaagcactgtggaaagctgagaagcatcagattgactctcacccatcattgcatgacatt
gaaatgatcctgagatctaatacacacaccagccaacagatccttatagttgccgacaca
actttctggctgccattgggtcaaaaattaacttcgatgaagatgacatttgttgagcta
ggaaaagaccctgctgcagcttatttagatccggtggacaagccaaaccctacaacttgg
gtgctcagaggattgccgaaatcagactgcattctgttagataataagaacattccagct
tcattccctttcagtgagtttggcatcgtactggaatacggaggtccagataaattatct
accttgttgtctctggctcctaatttagatggttttccacaactgcatttcctctatgtc
aaagtggatgttgaagatccttcggttgcacttgttgaggacaaccctacagaccaggag
ttgagagccacactggatacggttttgcatgcacttcagaaagatctgcaagagaagatg
aacaagatgcgtattgttgattcactgaactttataccagcaactaatcagctgcaagga
cggcaggaaaatctgtgcaaatatagcactgctgattcaacaaaaaaattgcctgcagat
gatcgactgctcaaacaaaattttttggagaaagagttcgctgatgcacatcattttgtt
cctacagctgaacagcggcacagagaggaaatgttgagcaaaagaactatcctccattca
caacattttgtgcctgcagttgagaagagcagctctacttcttctgtatctggaaatgcc
ataaaggccccacaagacaatctatctggtactgacttgccttccggtgtagaagttggt
cgtctcactctgggtagattatccaccccggcgattgttgtaaatactggaagtcatgga
aagaatatgcttttctctcggagatcatcttatcagcagatactatctttggagaaagga
ggaatgcaggttgtggaacgagacgttgatcttcctgtggacctaatactcagtactgca
gcttgcctagtatggtttgagacaaaaatctttgggagcaatgaattcacagcatcggca
gagacatctagtataacaaattttgtagagatcattgcgaccaacattctgatgtcaatt
agcttctgtttccgtggttgtataatggtctttgaaggtgaacctcactccctttctgct
gtaatggagacatctgattctctgtatgctgcggctgctagtctgatgatgaacgtgcag
atattcttctcatgcacacccaagttaacagatgagatagttctcagttgcattaggaat
gtgaatatgttgaataaagctccttctccagatatacctgaatcagaaagcttggctgaa
tcatttctcacaaaattcccttcaatcaatcccttgtctgcatacagtatgctttcttgt
ggaagcagccttgtggagttcctcagttggtcacatgagcgtcgtatacaggctgttgag
aagtatctgttctccccgcagagcatttctctgttcaatgctttgtgcaaattcggtgag
ctaggtgaatctaggtctgtgatgactgaaggctcttctgtagattcagacatctgtagt
gcattgttgcagtctccaagtaaaaggaaaaggtgcgcctctcaagtttttgcagtacca
actagtgatcccctccatccggattctctaaaccaattgcctggtgattatgtagaacat
aacaatgtattctcacagcctaagttgaggaggttctcggacgcggaggatgcaacgcct
cagctcccagaggtctttatgttcaatcaaagtttgagtaggggaggtgaaggggtctct
tgtctgccaagaaagcacaatattggtgcaataattggcaatcagatcatgggtgatcat
atcagcaatggatttactgcagatacgaggcattgtaaccaaagaagggctaacaatatg
gtggacacatatgacttctcttggcaaccggaatcagggggtaaagaacctatcaaaagc
tcttttcccgcaagcgaaccatcattcagccgaagttacagtcatccaatatttccatct
gcattagagatcaatgatgatactggttactgggacattccaggaggtgcacatggcact
tggaagggtcatgtacatgggggtattgcctcaacctcttgcagaaatgatgtgggcagc
agatatcatgagccaacagaggaaataatgcagaagggtcatgtacatggggatattgcc
ccaacctcttgcagaaatgatgtgggcagcagatatcatgagccaagagaggaaataatg
cagaagggtcatgtacatggggatattgccccaacctcttgcagaaatgatgtgggcagc
agatatcatgagccaagagaggaaataatgcagaagggtcatgtacatggggatattgcc
ccaacctcttgcagaaatgatgtgggcagcagatatcatgagccaagagaggaaataatg
cagaagggtcatgtacatggggatattgccccaacctcttgcagaaatgatgtgggcagc
agatatcatgagccaagagaggaaataatgcagaagggtcatgtacatggggatattgcc
ccaacctcttgcagaaatgatgtgggcagcagatatcatgagccaagagaggaaataatg
catgatccaggaagttcgcttgcttttctgaaacaggattctggctttcatgcaactcca
catggctcaagctgggaaattgattatctcaggcaaatgaacgaaaaaagaagagcacgt
gaggagagatcaagatgtaatacatcagcaatgatgtcaaattcaaggatgagggatgga
gtctcaaagattataaatcctccacttattggatccttcagataccagggagatggagat
actccttcaaggaaccggagcccatcagttgggactcggcattatgagaaagccagagaa
ggaactaaagcacatacccatagagcaagaaaagatttcaagatgcaaccaagtgtaagt
caggaaaacaggatagagccgtccatatatccatcgtggactcccgttgacaagagagcc
agacagaaactttcatttgcaacatacgggaaggagaagcaaagcaagttggtctggaga
gacccaaatagctctggtgctgagtgtggcttccggaaaagataccgggaagaaggtacg
tag
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