Tupaia chinensis (Chinese tree shrew): 102467923
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Entry
102467923 CDS
T02978
Symbol
ARID1B
Name
(RefSeq) AT-rich interaction domain 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03082
ATP-dependent chromatin remodeling
tup04714
Thermogenesis
tup05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102467923 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102467923 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102467923 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tup03000
]
102467923 (ARID1B)
03021 Transcription machinery [BR:
tup03021
]
102467923 (ARID1B)
03036 Chromosome and associated proteins [BR:
tup03036
]
102467923 (ARID1B)
Transcription factors [BR:
tup03000
]
Eukaryotic type
Helix-turn-helix
ARID
102467923 (ARID1B)
Transcription machinery [BR:
tup03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102467923 (ARID1B)
Chromosome and associated proteins [BR:
tup03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102467923 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
102467923
NCBI-ProteinID:
XP_014446113
LinkDB
All DBs
Position
Un
AA seq
1813 aa
AA seq
DB search
MGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGVG
SNPHPQPQQSSPYPGGSYGPPGPQRYPLGIQGRTPGTMGGMQYPQQQMPPQYGQQGVSGY
CQQGQQTYYNQQQPQPPHLPPQAQYLPSPSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNH
EDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHA
SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQS
PMPQERGFMAGTQRNPPMSQYGPQQTGPSMSPHPSPGGQMHPGISSFQQSNSSGTYGPQM
SQYGPQGNYSRPPTYSGVPSASYSGPGPGMGINANNQMHGQGPSQPCGAVPLGRMPSAGM
QNRPFPGNMSSTTPSSPGMAQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSF
PGMNQSGLLASSAPYSQPMNNSSGLMNTQAPAYSMPPTMANSSTASMGLADMMSPSESKL
PMPLKADGKEEGTPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESD
SISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLP
AVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFA
FECKIERGEEPPPEVFSTGDAKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLK
PPTPASTPHGQVTPIQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNTPYQQGMGMPDMMG
RMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDVYNQSPSGAMSNLGMGQRPQFPY
GASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDV
YSMQYGSQQQEVYNQYGGSYSGPDRRPMQGQYPYPYSRERMQGPAQMQPHGIPPQMMGGP
MQSSSSEGPQQNMWATRNDMPYPYPNRQGPGGPAQAPPYPGMNRTDEMMVPDQRINHESQ
WPSHVSQRQPYMSSSASMQPITRPPQSSYQTPPSLPNHISRAPSPASFQRSLENRMSPSK
SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDI
VTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCL
IDIFGILMEYEGGPPSHKALDHNAVKKDDSQSLADDSGKEDDAECGEEEEDDEEEEEDDS
EKPEADDKSSSAPTAPDASADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDQLGRVQEF
SSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSTGRKKEQEGEEQQEKSIIAT
IDDVLSARPGALPEDANPGPQAESSKFPFGIQQAKSHRNIKLLEDEPRSRDETPLCTIAH
WQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYE
KEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWM
VCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLV
RYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQ
HNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVA
SVICDVLFQIGQL
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgggcaaggacatgggcgcccagtacgccgctgccagcccggcctgggcggcc
gcgcaacaaaggagtcacccggcgatgagtcccggcacccccggaccgaccatgggcaga
tcccagggcagcccaatggatccaatggtgatgaagagaccgcagttgtacggggtgggc
agtaaccctcatcctcagccacagcagagcagcccctacccaggaggttcctatggcccc
ccaggcccacagcggtatccactgggcatccagggccggacgccggggactatgggcgga
atgcagtacccacagcagcagatgccacctcagtatggacagcaaggtgtgagtggttac
tgccagcagggccagcagacgtactacaaccagcagcagccgcagcccccgcacctcccg
ccgcaggcgcagtacctgccctccccgtcccagcagaggtaccagccgcagcaggacatg
tctcaggaaggctacggaactaggtcccaacctcctctggcccctggaaaacctaaccat
gaagacttgaacttaatccaacaagaaagaccatcaagcttaccagacctgtctggctcc
atcgacgacctccccacgggcacggaagcaaccctgagctcagcagtcagtgcatctggg
tccacgagcagccagggtgatcagagcaaccccgctcagtcacccttctctccacacgcg
tccccccatctctccagcatccctgggggcccgtcgccttctcctgtgggctctcctgtc
ggaagcaaccagtcacggtctggccctatttctcctgcgagtattccaggcagtcagatg
ccccctcagccacctgggagccagtcagaatccagttcccatcctgccttgagccagtca
ccaatgccacaggaaagaggttttatggcaggtacacaaagaaaccctccgatgtcccag
tatggacctcagcagacaggaccatccatgtcaccccacccctctcctgggggccagatg
catcctggaatcagcagctttcagcagagtaactcaagtgggacgtacggtccacagatg
agccagtatggaccacaaggtaactactccagacccccaacgtatagcggggtgcccagt
gcaagctacagcggcccagggcccggtatgggtatcaatgccaacaaccagatgcatgga
caagggccgagccagccatgtggggctgtgcccctgggacgaatgccatcagccgggatg
cagaacagaccgttccctggaaacatgagcagcacgacccccagttctcctggcatggct
cagcagggagggccaggaatggggccgccaatgcccactgtgaaccgtaaggcacaggag
gcagccgcagcagtgatgcaggctgctgcaaactcagcacaaagcaggcaaggcagcttc
ccgggcatgaaccagagcggcctcctggcctccagcgccccctacagccagcccatgaac
aacagctccggcctgatgaacacgcaggcgccggcctacagcatgccgcccaccatggcg
aacagctccacagcatctatgggtcttgcagatatgatgtctcccagtgaatccaaactg
cccatgcctctcaaagcagatggcaaagaagaaggcacgccgcagcccgagagcaagtcc
aaggatagctacagctctcagggtatttctcagcccccaaccccaggcaacctgccagtc
ccttccccaatgtcccccagctctgctagcatctcctcctttcatggagatgagagcgat
agcattagcagcccaggctggccaaagactccatcaagccctaagtccagctcctccact
accactggggagaagatcacgaaggtgtacgagctgggcaacgagccggagaggaagctc
tgggttgaccggtacctcaccttcatggaggagaggggctcccccgtctccagtctgcct
gcggtgggcaagaagcccttggatctcttccgactctacgtctgcgtcaaagagatcggg
ggtttggcacaggttaataaaaacaagaagtggcgtgagctggcaaccaacctaaatgtt
ggcacttcaagcagcgcagcaagctccctaaaaaagcagtatatccagtacctgtttgcc
ttcgagtgcaagatcgaacgaggggaggagcccccgccagaagtcttcagcaccggggat
gccaagaagcagcccaagctccagccgccctctcctgctaactcaggatccttacaaggg
ccacagacaccccagtcaactggcagcaactccatggcagaggttccaggtgacctgaag
ccacccaccccagcctccacccctcatggacaggtgaccccaattcaaggtggaagaagc
agtacaatcagcgtgcacgacccattctcagacgtgagtgattcgtcattccccaaacgc
aactccatgactccgaacaccccctaccagcagggcatgggcatgccggacatgatgggc
aggatgccctacgaacccaacaaggaccccttcggtggaatgagaaaagtgcctgggagt
agcgaaccctttatgacgcaaggacagatgcccaacagcagcatgcaggacgtgtataac
caaagtccctctggagccatgtccaacctgggcatggggcagcggccgcagtttccttac
ggagccagttacgatcgaaggcacgaaccttatgggcagcagtatccaggccaaggccct
ccctcaggacagccaccatatggaggacaccagcctggcctgtacccacagcagccgaat
tacaagcgccacatggacggcatgtacgggcccccagccaagcgccacgagggggacgtg
tacagcatgcagtatggcagccagcagcaggaggtgtacaaccagtacgggggctcgtac
tcgggcccggacaggaggcccatgcagggccagtacccgtacccctacagcagagagagg
atgcagggcccggcacagatgcagccgcacggaatcccgccacagatgatggggggcccg
atgcagtcgtcctccagcgaggggcctcagcagaatatgtgggcgacacgcaatgatatg
ccttatccctacccgaacaggcagggcccaggcggccccgcacaggcacctccttatcca
ggcatgaaccgcacggatgagatgatggtacctgatcaaaggataaatcacgagagccag
tggccttctcacgtcagccaacgtcagccttacatgtcctcttcagcctccatgcagccc
atcacgcgcccgccacagtcatcctaccagacgccaccgtcactgccaaaccacatctcc
agggcgcccagcccggcctccttccagcgctccctggagaaccgcatgtcacccagcaag
tcccccttcctgccctccatgaagatgcagaaggtcatgcccacagtccccacgtcccaa
gtcactgggccacccccccagccacccccaatccggagggagatcacctttcctcctggc
tcagtagaagcatcacagccagtcttgaagcaaaggcgaaagattacctcaaaagatatc
gttactcctgaggcatggcgtgtgatgatgtctcttaaatcagggcttttggctgaaagt
acttgggctttggacactattaatatcctcctctacgacgacagcactgttgctactttc
aatctctcccagctgtctggctttctagaacttctagtagagtactttagaaaatgcctg
attgacatttttggaattcttatggaatacgaagggggaccccccagccataaagcactt
gaccacaatgcagtgaagaaagatgacagccagtccttggcagacgattccgggaaagaa
gatgatgctgagtgtggggaggaggaggaggatgacgaggaggaggaggaggatgacagt
gagaagcccgaggccgatgacaagagctctagtgctcccaccgcccctgatgcctctgca
gatccaaaggagaagcccaagcaagccagtaagtttgacaagctgccaatcaagatcgtc
aagaagaacaacctgtttgtggttgaccgctctgaccagctggggcgggtgcaggagttc
agcagcggccttctgcactggcagctcggcgggggcgataccactgagcacatccagacc
cacttcgagagcaagatggaaatccctcctcgcaggcgcccgcctccacctctgagctcc
acaggcaggaagaaagagcaggagggggaagagcagcaggagaagagcatcatagcgacc
atcgacgacgtcctatccgcgcggccgggagcgctgcctgaagacgcaaaccctgggccc
caggctgagagcagtaagttcccctttggtattcagcaagccaaaagccaccggaatatc
aagctgctggaggacgagcccaggagccgggacgagactcctctgtgcaccatcgcacac
tggcaggactcgctggccaagcgctgcatctgtgtgtcaaatatcgtccgaagcttgtct
ttcgtgcctggcaatgatgccgaaatgtccaaacatccaggcttggtgctgatcctggga
aagctgattcttcttcaccacgagcatccggagagaaagcgagcgccgcagacctacgag
aaagaggaggatgaggacaagggggtggcctgcagcaaagatgagtggtggtgggactgc
ctcgaggtcttgcgggataacacgctggtcacgttagccaacatttctgggcagctagac
ttgtctgcttacacggaaagcatctgcttgccgattctggatggcttgctgcactggatg
gtgtgcccgtctgcagaggcccaagacccctttccaacggtgggacccaactcggtcctg
tcccctcagagacttgtgctggagaccctctgtaaactcagcatccaggacaataatgtg
gacctgatcttggccactcctccatttagccgtcaggagaaattctatgctacgttagtt
aggtacgtcggggatcgcaaaaacccggtctgccgagaaatgtccatggcgcttttatcg
aaccttgcccaaggggacgcactagcagccagggcaattgctgtgcagaaaggaagcatt
ggaaacttgataagcttcctagaggatggggtcacgatggcccagtaccagcagagccag
cacaacctcatgcacatgcagcccccgccgttggaaccgcctagtgtagacatgatgtgc
agggcggccaaggctctgctggccatggccagagtggacgagaaccgctcggagttcctt
ttgcacgagggtcggttgctggatatctcgatatcggctgtcctaaactctctggttgca
tctgtcatctgtgatgtactatttcagattgggcagttatga
DBGET
integrated database retrieval system
