Tupaia chinensis (Chinese tree shrew): 102472217
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Entry
102472217 CDS
T02978
Symbol
SMARCA4
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03082
ATP-dependent chromatin remodeling
tup04714
Thermogenesis
tup05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102472217 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102472217 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102472217 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tup03021
]
102472217 (SMARCA4)
03036 Chromosome and associated proteins [BR:
tup03036
]
102472217 (SMARCA4)
Transcription machinery [BR:
tup03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102472217 (SMARCA4)
Chromosome and associated proteins [BR:
tup03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
102472217 (SMARCA4)
Chromatin remodeling factors
BAF complex
102472217 (SMARCA4)
PBAF complex
102472217 (SMARCA4)
GBAF(ncBAF) complex
102472217 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
QLQ
BRK
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
102472217
NCBI-ProteinID:
XP_014448325
LinkDB
All DBs
Position
Un
AA seq
1634 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIQTQG
PGGYPQDSMHPMHKPMESMHEKGMSDDPRYSQMKGVGMRPGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLVRGQPLPDHLQMAVQGKRPMPGMQQQVPTLPPPSVAAPGPGPGPGPGPGP
GPGPAPPNYSPPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVPCWGRERHPAPPSPESRWGLAGPRGLARRTPPCRC
GRCPFLRHFLPRGQLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQE
VVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSI
LQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYR
KLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAI
GPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGFALRGPYAQAS
YGKTKQDKKSILSLSDELRPHGLSPLQEEEEEQPQPAQPPTMPVEEKKKIPDPDSDDVSE
VDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIK
GLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAY
EFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIV
DEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFE
QWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDM
SALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFS
EHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRG
FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP
HQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSS
HERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKR
KPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIE
EGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSP
NPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKER
IRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGE
ESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEE
EQEEDRSGSGSEED
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggtggaactcctcggccgggcccttctccgggcccc
ggcccctcgcctggagccatgctgggcccgagccctggtccctccccgggctctgcccac
agcatgatggggcccagcccggggcctccctcagcaggacaccccatccagacccaggga
ccaggagggtaccctcaggacagcatgcacccgatgcacaagcccatggagtccatgcac
gagaagggcatgtcggacgacccgcgctatagccagatgaagggagtgggcatgcggccc
ggcggccacgcgggcatggggcccccgcccagccccatggaccagcactcccaaggttac
ccgtcacccttgggtggttccgagcatgcctccagcccagttccagccagtggcccatcc
tcaggcccccagatgtcatccggtccaggaggggcccccctggatggtgccgacccccag
gccttggggcagcagaaccgggggcccaccccgttcaaccagaaccagctgcaccaactc
cgtgctcagatcatggcctacaagatgctggtcaggggccagccccttcccgaccacctg
cagatggccgtgcaggggaagcggcccatgcccgggatgcagcagcaggtgccaacgcta
cctccgccctccgtggctgccccaggacccggccccggccccggccctggccccggcccc
ggccctggccccgcacctccaaactacagcccgcctcacggtatgggagggcccaacatg
cctcccccaggaccctcaggtgtgccccctgggatgcccggccagcctcccggagggcct
cccaagccctggcctgaaggacccatggcaaacgctgctgcccccacaagcactcctcag
aagctgatccccccgcagcccacgggccgcccctctcccgcgccccccgccgttccccct
gctgcctccccggtgccctgctggggccgggagcgccaccctgctccaccctccccagag
tcccgctggggcctcgcaggcccccgaggcctggcccgaaggactcctccctgccgctgt
ggccggtgtcctttcctgcggcacttcctgcctcgtggccagctgcaggctcgcatcgca
caccgaattcaggaactagaaaaccttcccgggtccctggccggggatttgcgaaccaaa
gcgaccatcgagctcaaggccctcaggctgctgaacttccagaggcagctgcgccaggag
gtggtggtgtgcatgcggcgggacacggccctggagacggccctcaacgccaaggcctac
aagcgcagcaagcggcagtccctgcgcgaggcgcgcatcaccgagaagctggagaagcag
cagaagatcgagcaggagcgcaagcggcggcagaagcaccaggaatacctcaacagcatc
cttcagcacgccaaggatttcaaggagtaccacagatcggtcaccggcaaaatccagaag
ctgaccaaggcggtggccacgtaccacgccaacacagagcgggagcagaagaaagagaac
gagaggatcgagaaggagaggatgcggaggctcatggccgaggacgaggaggggtaccgc
aagctcatcgaccagaagaaggacaagcgcctggcctacctcctgcagcagacggacgag
tacgtggccaacctcacggagctggtgcggcagcacaaggccgcccaggtcgccaaggag
aagaagaagaagaagaagaagaagaaggcagaaaatgcagagggccagacgcctgcgatc
ggaccggacggcgagcctctggatgagaccagccagatgagtgacctcccagtgaaagtc
atccacgtggagagcgggaagatcctgacgggcaccgatgcccccaaagccgggcagctg
gaggcctggctcgagatgaacccaggatttgcccttcgtgggccctacgcacaagcttcg
tatggcaagacgaagcaagacaaaaagagcatcctttctctctctgatgagctgaggccg
cacggtctgtcccctttgcaggaggaggaggaggagcagccgcagccagcccagcccccc
accatgcccgtggaggagaagaagaagattccagatccagacagcgacgacgtctccgag
gtggatgcgcggcacatcattgagaacgccaagcaagatgtggatgacgagtacggcgtg
tcgcaggccctcgcccggggcctgcagtcctactatgccgtggcccacgctgtcaccgag
cgcgtggacaagcagtcggcgctcatggtcaacggcgtcctgaagcagtaccagatcaaa
ggcctggagtggctggtgtcgctgtacaacaacaacctgaatggcatcctggccgacgag
atgggcctgggcaagaccatccagaccatcgcgctcatcacgtacctcatggagcacaag
cgcatcaacggccccttcctcatcatcgtgccgctctcgacgctgtccaactgggcgtac
gagttcgacaagtgggccccctccgtggtgaaggtgtcctacaagggctcgccagcggcc
agacgggcgttcgtgccgcagctccggagcgggaagttcaacgtgctgctcaccacctac
gagtacatcatcaaggacaagcacatcctcgccaagatccgctggaagtacatgatcgtg
gacgagggccaccgcatgaagaaccaccactgcaagctgacacaggtgctcaacacgcac
tacgtggccccgcgccgcctgctgctcaccggcacgccgctgcagaacaagctgcccgag
ctctgggcgctgctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgag
cagtggttcaacgcgcccttcgccatgaccggggagaaggtggatctgaacgaggaggag
accatcctcatcatccgccgcctccacaaggtgctccggcccttcctgctgcgccgcctc
aagaaggaggtcgaggcccagctgcccgagaaggtggagtacgtcatcaagtgcgacatg
tccgcgctgcagcgcgtgctctaccgccacatgcaggccaagggcgtgctgctgaccgac
ggctcggagaaggacaagaagggcaaaggcggcaccaagacgctgatgaacaccatcatg
cagctgcggaagatctgcaaccacccgtacatgttccagcacatcgaggagtccttctcg
gagcacttggggttcaccggcggcatcgtccagggcctggacctgtaccgcgcctcgggg
aagttcgagctgctcgacaggatcctccccaagctgcgagccaccaaccacaaggtgctg
ctcttctgccagatgacctcgctcatgaccatcatggaagattacttcgcatatcgcggc
tttaaatacctcaggctcgacggaaccacgaaggcggaggaccggggcatgctgctgaaa
accttcaacgagcccggctccgagtacttcatcttcctgctcagcacccgggccggcggg
ctcggcctgaacctgcagtcggccgacactgtgatcatcttcgacagcgactggaacccg
caccaggacctgcaggcgcaggaccgcgcccaccgcatcgggcagcagaacgaggtgcgc
gtgctgcggctgtgcaccgtcaacagcgtggaggagaagatcctggccgccgccaagtac
aagctcaacgtggaccagaaggtcatccaggccggcatgttcgaccagaagtcgtccagc
cacgagcggcgcgccttcctgcaggccatcctggagcacgaggagcaggacgaggaagaa
gacgaggtgcccgacgacgagacggtcaaccagatgatcgcgcggcacgaggaggagttc
gacctcttcatgcgcatggacctggaccgcaggcgcgaggaggcccgcaaccccaagcgg
aagccgcgcctgatggaggaggacgagctgccgtcctggatcatcaaggacgacgccgag
gtggagcggctgacctgcgaggaggaggaggagaagatgttcggccgcggctcccgccac
cgcaaggaggtggactacagcgactcgctgaccgagaagcagtggctcaaggccatcgag
gagggcacgctggaggagatcgaagaggaggtccggcagaagaaatcgtcgcggaagcgc
aagcgggacagcgacgccggctcctccaccccgaccaccagcacgcgcagccgcgacaag
gacgacgagagcaagaagcagaagaagcgcgggcgcccgccggccgagaagctgtccccg
aacccgcccaacctcaccaagaagatgaagaagatcgtggacgccgtcatcaagtacaag
gacagtagcagtggacggcagctcagcgaggtcttcatccagctgccgtcgcgcaaggag
ctgcccgagtactatgagcttatccgcaagcccgtggacttcaagaagatcaaggagcgc
atccgcaaccataagtaccgcagcctcaacgacctggagaaggacgtcatgctcttatgc
cagaacgcccagaccttcaacctggagggctccctgatctacgaagactccatcgtcctg
cagtccgtcttcaccagcgtgaggcagaaaatcgagaaggaggacgacagcgagggcgag
gagagcgaggaggaggaggagggcgaggaggagggctccgagtctgagtcccgctccgtc
aaggtgaagatcaagcttggccggaaggagaaggcccaggaccggctgaaggggggccgg
cggcggccgagccgggggtcccgggccaagcccgtcgtgagcgacgacgacagcgaggag
gagcaggaggaggaccgctcaggaagtggcagcgaggaggactga
DBGET
integrated database retrieval system
