Tupaia chinensis (Chinese tree shrew): 102487209
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Entry
102487209 CDS
T02978
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102487209 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102487209 (CNOT3)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102487209 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102487209 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
102487209
NCBI-ProteinID:
XP_014441864
LinkDB
All DBs
Position
Un
AA seq
750 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPAHSTQHPQSPAVPPAYPPGPPPAASALSTTPGNNGAPAPTAAPSALGPKASP
APSHNSGTPAPYAQAVAPPAPSGPNSAQPRPPSAQPSGGGSGGGSGGSNSSSSAGGGANK
QNGATSYSAVVADSPAEVALSSSGANSANSQALGAPSGPHNPPPSTSKEPSAAAPAGAGG
VAPGSGNNSGPSLLVPLPVNPPSSPTPSFSEAKAASTLLNGPPQFSAAPEIKAPEPLSSL
KSMAERAAISSGIEDPVPALHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGVCPLG
PVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFY
QRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGT
YIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtggagcagtttgaagatatttggcagaagctccacaatgcagccaacgcaaaccag
aaggagaagtatgaggctgacctcaagaaggagatcaagaagctacagcggctaagggac
cagatcaagacatgggtggcgtccaacgagatcaaggacaagaggcagctcatagacaac
cgcaagctcatcgagacgcaaatggaacggttcaaagttgtggaacgagagaccaaaacc
aaagcgtatagcaaggagggcctgggcctggcccaaaaggtggaccccgcccagaaggag
aaggaagaggttggccagtggctcacgaacaccatcgacaccctaaacatgcaggtggac
cagtttgagagtgaggtggagtccctatcggtgcaaacacgcaagaagaagggggacaag
gatcagaagcaggaccggatcgagggcttgaagcggcacatcgagaagcaccgctaccac
gtgcgcatgctggagaccatcctgcgcatgctggacaacgactccatcctggtcgacgcc
atccgcaagatcaaggacgacgtcgagtactacgtcgactcctcccaggacccggacttc
gaggagaacgagttcctctacgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagccacatggaggacgagatcttcaaccagtccagcagc
acacccacctcgaccacttccagctctcccatcccacccagcccagccaactgcaccacg
gaaaactctgaagatgataagaagaggggacgctcaacggacagcgaagtcagccagtct
cctgccaagaacggctccaagcctgcacacagcacccagcaccctcagtccccagctgtg
ccacctgcctaccctcctggccccccgcccgctgcctctgccttgagcaccacccctggc
aacaatggggcccccgcccctactgcagctccaagtgccctgggccccaaggccagtcca
gctcccagccacaactcgggcacccctgccccctacgcccaggctgtggccccaccagca
cccagcggacccaacagtgcccagccccggccccccagcgcccagcctagcgggggaggc
agtggaggtggcagcggcggcagcaacagcagcagcagtgcagggggcggcgctaacaag
cagaacggagccaccagttacagtgcagtcgtggctgacagcccagcggaggtggctctg
agcagcagtggggccaacagcgccaacagccaggctctgggtgccccatccggcccccac
aacccacctcccagcacctcgaaggaacccagcgcagcagccccagcaggggccgggggc
gtggccccaggctcagggaacaactcgggacccagcctcctggtgccactgcctgtgaac
ccccccagctccccgactcccagcttcagtgaggccaaggcagccagcaccctgctcaat
gggcctccgcagttcagcgctgccccagagatcaaggcccctgagcccctgagctccttg
aagtccatggcagagcgggccgccatcagctctggcatcgaggaccctgtgccagcgctg
cacctgacggagcgagacatcatcctgagcagcacgtcggcacctccagcctcagcccag
ccgcccctgcagctgtcggaggtgaacatcccactctcactgggcgtgtgtcctctgggg
cctgtgcccctcaccaaggagcagctctaccagcaggccatggaggaggccgcctggcac
cacatgccgcacccctcggactctgagcgcatccggcagtacctgccccggaacccctgc
ccgacgcccccctaccaccaccagatgccgcccccacactcggacaccgtggagttctac
cagcgcctgtccactgagacgctcttcttcatcttctactatctggagggcacgaaggca
cagtacctggcagccaaggccctcaagaagcagtcatggcgattccacaccaagtacatg
atgtggttccagaggcacgaggagcccaagaccatcacggatgagttcgagcagggtacc
tacatctacttcgactacgagaagtggggccagcggaagaaggaaggcttcaccttcgag
taccgctacctggaggaccgggacctccagtga
DBGET
integrated database retrieval system
