Tupaia chinensis (Chinese tree shrew): 102501016
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Entry
102501016 CDS
T02978
Symbol
NR1D2
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
102501016 (NR1D2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tup03000
]
102501016 (NR1D2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tup03310
]
102501016 (NR1D2)
Transcription factors [BR:
tup03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102501016 (NR1D2)
Nuclear receptors [BR:
tup03310
]
1. Thyroid hormone like
1D. Rev-Erb
102501016 (NR1D2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
LpxD
Motif
Other DBs
NCBI-GeneID:
102501016
NCBI-ProteinID:
XP_006170653
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All DBs
Position
Un
AA seq
623 aa
AA seq
DB search
MVGEPAGVALLGTQPGRGSAGPLSAQVKKQRRGIWLTCKEQFARTNADHYGGVIAYISSS
SSASSPASCHSEGSENSFQSSSSSVPSSPNSSNSDTNGNPKNGDLSNIEGILKNDRLDCS
VKTSRSSAAGMTKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNI
QYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAM
KTMMNSQFNGHLQNDTLVEHHEQTALPAQEQLRPKPQLEQENIKSSPPPPSDFAKEEVIG
MVTRAHKDTFLYNQEQRENSAESMQPQRERIPKNVEQYNLNHDHCGNGLSSHFPCGESQQ
HLDGQYKGRSMMHYPNGHAICIADGHCMNFSSAYTQRVCDRAPVDGFSQNENKSSYLCNT
AGRMHLVCPMSKSPHVDPHKSGHEIWEKFPMSFTPAVKEVVEFAKRIPGFRDLSQHDQVN
LLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNAL
QLSDEEMSLFTAVVLVSADRSGIENVSSVEALQETLIHALRTLVMKNHPNEASIFTKLLL
KLPDLQSLNNMHSEELLAFKVHP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagagcctgcaggggtggcgctcctaggcacgcagccaggacgtgggtcagca
ggacctctgtcagcccaagttaaaaagcaaaggagagggatctggttgacctgcaaggag
caatttgcaagaacgaatgctgaccactacggaggagtaattgcctatatcagttcttcc
agctcagcctccagccctgcctcttgtcacagtgagggttccgagaacagtttccagtcc
tcctcctcttctgttccatcttctccaaatagctctaattctgataccaacgggaatccc
aagaatggtgatctctccaacattgaaggcatcctgaagaatgatcgtctagactgttct
gtgaaaacaagcagatcgagtgcagcggggatgaccaagagccacagtggagtgacgaaa
tttagcggcatggttttactgtgtaaagtctgtggggatgtggcatcgggattccactat
ggcgttcatgcttgtgaaggctgtaagggtttcttccgcagaagtattcaacaaaacatc
cagtacaagaagtgcctgaagaatgaaaactgctctataatgagaatgaataggaacaga
tgtcagcagtgtcgtttcaaaaagtgtctgtctgtcgggatgtcaagagacgctgttcgg
tttggtcgtatccctaagcgtgaaaaacagaggatgctaattgaaatgcaaagtgcgatg
aagaccatgatgaacagccagttcaatggtcacttgcagaatgacacattagtagaacat
catgaacagacagccttaccagcccaggaacagctgcgacccaagccccagctggagcaa
gagaacatcaaaagctctcctcctcccccttctgattttgcaaaggaagaagtgattggc
atggtgaccagagcccacaaggatacctttttgtataatcaagagcagcgagaaaactca
gctgagagcatgcagccccagagagaacggattcccaaaaacgtggagcagtataattta
aatcacgaccactgtggcaatgggcttagcagccattttccctgtggtgagagccagcag
catctcgatggacagtacaaagggaggagcatgatgcattacccgaatgggcacgccatt
tgtattgcagatggacactgcatgaacttctccagtgcttatactcaaagagtatgtgat
agagctccggtagatggattttctcagaatgagaacaaaagtagttacctgtgcaacact
gcagggagaatgcatctggtttgtccaatgagtaagtctccacacgtggatcctcataaa
tcagggcatgaaatctgggaaaaatttcccatgagttttaccccagcagtgaaagaagta
gtggaatttgcaaagcgtattcctgggttcagagatctctctcaacatgaccaagtcaac
cttttaaaggctgggacttttgaggttttaatggtacgatttgcatcattatttgatgca
aaggagcgtactgtcacctttttaagtggcaagaagtatagtgtggatgatttacactca
atgggagcaggggatctgctaaactctatgtttgaatttagtgaaaagctaaatgccctc
caacttagtgatgaagagatgagcttgtttacagcagttgtgctggtgtctgcagatcga
tctggaatagaaaacgtcagctctgtggaggctttacaggaaacactcatccatgcacta
aggaccttagtaatgaaaaaccatccaaacgaggcctctatttttacaaaattgcttcta
aagttgccagatcttcaatctttaaacaacatgcactctgaggagctcctggcctttaaa
gttcacccttaa
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