KEGG   Tetranychus urticae (two-spotted spider mite): 107371241
Entry
107371241         CDS       T04901                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tut  Tetranychus urticae (two-spotted spider mite)
Pathway
tut03030  DNA replication
tut03410  Base excision repair
tut03420  Nucleotide excision repair
tut03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107371241
   03410 Base excision repair
    107371241
   03420 Nucleotide excision repair
    107371241
   03430 Mismatch repair
    107371241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tut03032]
    107371241
   03400 DNA repair and recombination proteins [BR:tut03400]
    107371241
Enzymes [BR:tut01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     107371241
    6.5.1.6  DNA ligase (ATP or NAD+)
     107371241
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     107371241
DNA replication proteins [BR:tut03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    107371241
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     107371241
DNA repair and recombination proteins [BR:tut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     107371241
   NER (nucleotide excision repair)
    Other NER factors
     107371241
   MMR (mismatch excision repair)
    Other MMR factors
     107371241
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 107371241
NCBI-ProteinID: XP_015794754
LinkDB
Position
Unknown
AA seq 703 aa
MIKSCFKITSYFHNNCLFLNRNLRVFLISSMSTTMSLKRKREEEVPNKKTNGANGTVEYN
PAKSNYDVLKDASWKDGEKTPFIYFTLTLKAIEEVSSRLKMIEILANYLWSVKSKSPDDL
LPSIYLCLNKLGPAYEGLELGIGETIIMKALANATGRRVDQIKADIKKKGDLGLVAEDSR
TTQSLLFRPPRLTVQGVFKSFREIAQYSGQSSAQKKTDKIQSLIVACRDCEARYLVRSLA
GKLRIGLAEQSLLSALAQSIVLGDTKAKRGTDSFKAKVDEVTQILKTVYCRCPNYEQIIN
VLLEHGWESLEEKCQLVPGVPLKPMLAHPTKGVDEVLRRFNQAKFTCEFKYDGERAQIHL
LENGEVRIFSRNQEDNTSKYPDIISRMKDVIKPDVKTCIIDSEAVAWDSQEQQILPFQVL
STRKRKDAAEEDIKVHVCLFAFDLLYLNGESLVTKSFSERRNHLYQSFNEIKGKFMRAVS
RDVETTDEIQEFLDESIKAKCEGLMVKTLDVDATYEIAKRSRSWLKIKKDYLEGVGDTLD
LVVIGAYIGKGKRTGAYGGYLLACYDEEKEEFQSICKLGTGFKDEDLEKQFELFKELIIE
RPKSYYNFDPSIKPDVWFDAVQVWEVKCADLSISPVHRAAFGSLESEKGISLRFPRFIRI
RDDKKAEEATSAMQVVDMYNNQEQIKNQTKTHDSDDEMDIDDK
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgattaaaagctgttttaaaataacctcgtactttcataacaattgtttatttttaaat
cgtaatttacgtgtgtttctcatctcatcaatgtctactaccatgtcacttaaacgaaaa
agagaggaagaagtgcctaataaaaaaacaaatggagcaaatggtactgttgagtacaat
cctgctaaaagcaactatgatgttttgaaggatgcttcatggaaagatggcgagaaaacg
ccgttcatctatttcactttaactctaaaggctatcgaagaggtgtcatcaagacttaag
atgattgaaatcttagctaattatttatggtctgttaaaagcaagagtcctgatgatctt
ttaccttcaatctatttgtgcctaaacaaactggggcctgcttatgagggccttgaattg
ggaattggggagacaatcatcatgaaagctttggccaatgctacgggaagaagagttgat
caaattaaggctgatatcaagaagaaaggtgatctaggtcttgtagctgaggacagtcgg
acaacacagagtttactgtttagacctccgagattaactgtccaaggtgtcttcaaaagt
ttccgtgaaattgctcaatattctggacaaagttcagcgcaaaaaaagacagataaaatc
caatctttaattgttgcttgtagagattgtgaggctagatatctagttagatctctagct
ggtaaattacggataggattagctgaacagtctttactttcagctttagctcagagtatt
gttttaggagataccaaagctaaaagaggaacggattcttttaaagctaaagttgatgaa
gtcacgcaaattttaaaaactgtttattgccggtgtccgaattatgaacagataataaac
gttctcttagaacacggatgggagtctctggaagagaaatgtcagttagttcctggtgtt
ccattgaagcctatgttggctcatcctacaaaaggtgtagatgaagttttacgtcgtttc
aatcaagcgaaattcacttgtgagttcaaatatgatggtgaaagagctcaaatacatttg
ctagaaaatggagaagttcgtattttcagcagaaatcaagaagacaacacgtccaaatat
ccagatataatctcgagaatgaaagatgtcatcaaacctgatgttaaaacttgtatcatt
gattcagaggcagttgcttgggattcgcaagagcaacagattttaccttttcaagtatta
agtactagaaagaggaaagatgccgcagaagaagacataaaagttcatgtttgtttattt
gcttttgatctcctttatttaaatggagaatctttggtgactaaaagtttcagtgagcga
aggaatcatctttatcaaagtttcaatgaaattaaaggaaaatttatgcgcgccgtgtct
cgagatgttgaaactactgatgagattcaagaatttttggacgaatcaatcaaagcaaaa
tgcgaagggttaatggtgaaaacattagatgttgatgcaacttatgaaattgctaaacga
tctcgaagctggcttaagatcaaaaaagattatcttgaaggagttggtgatacgcttgat
cttgttgtcatcggagcttatattggtaaaggcaaaagaactggtgcctatggtggttac
ttattagcttgttatgatgaggaaaaggaagagtttcagtctatatgtaaacttggtact
ggtttcaaagatgaagatttagaaaagcagtttgaattgttcaaagagttgatcattgaa
agacctaaatcatactataactttgacccgtcaattaaacctgacgtttggttcgatgca
gttcaagtatgggaagttaaatgcgctgatttatcgatttctcctgttcatcgagcagct
ttcggttctttggaatctgaaaaaggaatatccctgcgtttccctcgcttcataagaatc
agagatgataaaaaagcagaagaagcaacttcagctatgcaagttgtagatatgtataat
aatcaagaacaaatcaaaaatcaaacaaaaactcatgacagtgatgatgaaatggatatt
gatgataaataa

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