Tetranychus urticae (two-spotted spider mite): 107371525
Help
Entry
107371525 CDS
T04901
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107371525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tut03021
]
107371525
Enzymes [BR:
tut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107371525
Transcription machinery [BR:
tut03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107371525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
107371525
NCBI-ProteinID:
XP_015795120
UniProt:
T1JVI2
LinkDB
All DBs
Position
Unknown
AA seq
1815 aa
AA seq
DB search
MNISLLSQFSLATVSFKPYSRQELKKSSVLEVTNPVSFDALGHPTKGGLHDPVLGPSRRD
DICETCNLGGHGKDECPGHFGHISLPVPIYNPFFIRQMFQMLSMCCFSCHHLLFHPANLQ
VVLYQLQALDYGLDYLVDELQSVANDLSNIKSDKGPEFIDFLKAKLSECIENALKQNSTN
SKNDVSQVRNVIDRKQNLMKALLQGKLVKIIKNCAHCNNKKFNMSLVNNSMVLMSQPKSL
PKHYGFTASNETPETSGSVLKDKVQEVDSSGKSFLTPLVARDHLRQLYKNETETLKRMLK
LIHTEEGLEDALEGDDSAIDVFFMDMIPVTPPRFRPLHMMGGKSYEDETTTMLTQVILAS
EGLKNSLKSLQNLDQTSVKEKTQEMTKLHSAWGRLQILCNRIYDSEMDKLPEKKAPGVRQ
ILEKKEGLFRKNMMGKRVNYAARSVISPDPYISVDEIGIPEIFATRLSYPQPVTPWNVEV
MKKAVINGPDIHPGALSVTLEDGSVMRLRANDPEQRARIANLLGQHKPGSRTVNRHLING
DILLLNRQPTLHKPSIMAHKARVLKREKTLRLHYSNCKCYNADFDGDEMNAHFPQSELAR
SEAYNIVSVNKQYLVPKDGSPLGGLIQDHIVSATLLTMKGNFFNRKDYQQLVFSALFNQK
TPIKLVKPTIWRPVPLWSGKQIITTLIINLVPPDKTPPTLYISSKVNSKTLSSGNFRDIT
VSKYYTPEELDDSTVIIRQGEVLQGLIDKANIGPTPYGLIHICYELYGGEVSNSLLTAIA
RLCTVYLQVHGGVTLGIEDIIVNENADRKRSEIIRASTTVGDEAATQAVGLPITCEKSVL
VKRLREWHASQDPVLMKTLDSCMKSKTDEVNDGITKVCLPAGLIKKFPHNNLQLMIQSGA
KGGTVNALQISCLLGQIELEGKRVPLMMSGRTLPSFVPYDTSPKAGGFVTGRFLTGIRPQ
EFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLTVQYDSTVRDIDGSLVQLQYGED
GIDVLKSQLLKPKAMPLLIHNRAVLMPTDEELSRLQLSPDILAKIEEYRQNISDWEEINE
MDRLKRRIGSGFQEYFEVKLRDYKNNLPESVGPTELSQEDYSTIIDSWFQLSKNDKRQLN
FYFLPCPGPLSIDFRPNHHFGVLPEKMEYQIQNYVKSSPDGLVFDPSVDVGDESWKGKQI
VTITELKNLINSRFMKSLADPGESVGLLAAQSIGEPSTQMTLNTFHFAGRGDMNVTLGIP
RLREILMTASPKIATPNMDIPFRSDFDENRIDAVRKRMSSVKLCDVLETIDVKEILTINE
KTCARYYDIVFKFLPYQTYKKKFNAKPAKILSYMESTFIKNLINAIKRAQIIQRKYNSLY
DHSMHHREAKGGDENEGAPSAPTRENPDAVSSDEEDNAVEEDTHAVRTKAHRNQELDYEE
PEEEEIEANKEPEEDQTDNITTLEPDEEVHPKVDEDEELQQQNEQESAESQKEKQPETNE
RQDDDWNPLLTKTLEKEKKEKEMLAKKALTESLVKEKSSFIDLYDYDEVKKEWCRVVLKF
PLNTDKVDIASIVEEEARKSYIFKIGSIDKVFLVEDREASKRGVSHGKMIKTEGVGFFDL
VNMQSIFDLNRVYSNDIHAIANTYGIEAARKAITIEIANVFAVYGIEVDPRHLSLIADYM
TFNGTIKGMNRISMAGSSSPLQQMTFETTAAFLKSALLLDFKDELKSPSARIFAGRPPLV
GTGILGLMQDGTVEYKPSQHLRFKNIKNDSKISPKSGRKFGPRNRTSNRFGNLKRKHQSP
NISIEKPLNKRTKFD
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatcgttgttatctcaattttcccttgcaactgtatcattcaaaccctattct
cgccaagagctcaaaaagtcaagcgtacttgaggtgacaaacccggtatcgtttgatgct
cttgggcatccgacaaaaggtggtctgcatgatcctgttttaggtcctagtcgaagggat
gatatatgtgaaacctgtaatcttggaggacatggcaaggatgagtgtccaggacatttt
ggacatatcagtcttcctgtaccgatttataacccattttttattcgtcaaatgtttcaa
atgttatccatgtgttgttttagctgccatcatttattgtttcaccctgctaacctgcaa
gttgttctataccaacttcaagctcttgattatggccttgattaccttgttgatgaactt
caatctgtagccaatgatttatccaatataaaatctgacaaaggtcctgagtttatagat
tttctcaaagcaaaattatctgaatgtattgagaatgcattgaaacaaaactctacaaac
tcaaaaaacgatgtcagtcaagtcaggaatgtcattgatcgcaagcaaaatttaatgaaa
gctcttcttcaaggcaaattggtcaaaattataaaaaattgtgcacattgtaataacaaa
aaattcaacatgagtcttgttaacaactctatggtgctaatgtctcaaccaaaatctcta
ccaaagcattatggatttacagcatctaacgaaactcccgaaacgtctggaagtgttctt
aaagataaagttcaagaagttgactcttctggaaaatcgttcttaaccccattggttgcc
agagatcatttgagacaactctataaaaatgaaactgaaacattaaaaagaatgttgaaa
ctcatccatacagaagaaggactcgaagatgctcttgaaggagatgatagtgccatagac
gtcttttttatggacatgataccagtgactccaccacgatttcgtcctctacacatgatg
ggaggtaaatcttatgaagatgagacaactacaatgttaactcaagtgattttagcatca
gaaggcttaaagaatagtttgaaaagtttacaaaatctagaccaaacatctgtcaaggag
aaaacccaagagatgaccaaacttcactctgcttggggccgtcttcaaattttatgcaac
agaatttatgatagtgagatggacaagctaccagaaaagaaggctcccggtgttcgtcaa
atattagagaaaaaagaaggtttattccgaaagaatatgatggggaaaagagtaaactat
gcagctcgttcagttatctctcctgatccatatatatctgttgatgaaatcggtattcct
gaaatttttgctactaggttatcttatccccaaccagtaactccttggaacgttgaagtg
atgaaaaaggccgttataaatggtcccgacattcatcctggtgctttgtcagtcactctt
gaggatggttcagttatgaggttaagagctaatgatccagagcaaagagccagaatcgct
aatttacttggacaacataaacctggatctagaactgttaatcgtcatctgatcaatgga
gatattttacttctaaatcgtcaaccaactcttcacaagccaagtataatggctcataaa
gctcgagtcttaaaacgtgaaaagacacttcgattacattattccaactgtaaatgttat
aacgccgatttcgatggggatgaaatgaatgcccattttccgcaaagtgaacttgctcgc
tcagaagcttacaacattgtcagtgtcaacaaacagtatcttgttccaaaggatggttcg
cctttaggtggtctcattcaagatcacattgtttcagcaactcttcttactatgaaaggt
aactttttcaatcggaaagactatcagcaactagtattcagtgccttgttcaatcaaaaa
actccaatcaaattagtgaaacccactatttggagacctgtgcctctatggtctggtaaa
caaatcattaccacattgattatcaacttagttcctccggataagactccaccgactctt
tacatatcttctaaagtcaatagcaaaacccttagttcgggaaattttagagatattact
gtatctaaatattatacacctgaagaattggatgactctaccgtcatcattagacaagga
gaagttttgcaaggattgattgacaaagccaacattggaccgacaccttatggtttgatt
cacatttgctatgaactttatggtggtgaagtttcaaacagtttactaactgcaatcgct
cgtttatgtactgtctatcttcaagtccatggaggagtaacgttaggtatagaagatatt
attgtgaatgagaatgctgacaggaaacgcagtgagataatcagagcttcaactactgtt
ggtgatgaagcagctactcaagcagttggcttaccaatcacttgtgaaaagtctgttctc
gtaaagagattacgggaatggcatgcatctcaagatccagttttaatgaaaactcttgat
agttgtatgaaatctaaaacagatgaagtaaacgatggaataactaaagtatgtttacca
gctgggctgattaaaaagtttccgcataacaatctgcaactaatgattcaatcaggagct
aagggaggaactgtcaatgcattacaaatctcttgtttacttggtcaaattgaattggaa
ggaaaacgtgttccacttatgatgagcggtcgaacattaccaagcttcgtaccctatgac
acatctccaaaagctggaggattcgttacaggacgtttcttaacaggaattcgaccacaa
gagtttttcttccattgtatggctggtcgtgaaggtttgatagatacagctgtcaaaaca
tctagatcaggttatcttcaaagatgtttaatcaagcatctagagggactgactgttcaa
tatgattcaactgtaagagatattgatggaagtcttgttcaattacagtatggtgaagac
ggtatcgacgtcttgaaaagccaacttttaaaacctaaagctatgcctctactcattcat
aatagagctgtgcttatgcctactgatgaagaactgtctcgactccaactttcacctgat
attttagcaaagattgaagaatatagacaaaatatttcagactgggaagaaattaatgaa
atggatcgcttgaagcgtcgtataggatctggatttcaggaatatttcgaggtaaagctt
cgtgattacaaaaataatttgccggaatccgttggacctacagaactttctcaagaagat
tactcaactatcattgattcttggttccaattaagtaaaaatgacaaaagacagttgaat
ttctactttttaccttgccctggtccgttatctattgattttcgaccaaatcatcatttc
ggagtgcttccggaaaaaatggaatatcaaatccaaaattatgttaaatcatctcctgat
ggactagtttttgatcctagcgttgatgttggtgacgagtcttggaaaggaaagcaaatc
gttacaattactgaacttaaaaatttgattaactctcgcttcatgaaatctttagccgat
ccaggagaatcagttggacttttagctgctcagtcaattggagaaccttcaactcaaatg
actttaaatactttccatttcgctggtcgaggagacatgaacgttactttgggtatacct
cgacttcgagaaattttaatgactgcttcacctaaaatagcaactcccaatatggatatt
ccattcagaagtgatttcgatgaaaataggattgatgcagttcggaaaagaatgagttca
gttaagttgtgtgatgtcctcgagactatcgatgtcaaagaaatattgactatcaacgaa
aaaacttgtgctcggtattatgatatagtgtttaagtttctaccatatcaaacttacaaa
aagaaatttaatgctaaacctgctaaaattttgtcttacatggagtctactttcattaaa
aatttaatcaacgcaataaaacgagctcaaatcattcaaaggaaatacaattctctatac
gaccattcaatgcaccacagggaagctaaaggaggtgatgaaaatgaaggagcaccttcc
gctccaactagagaaaatcctgatgctgttagctctgatgaggaagataacgcagttgaa
gaagatacacacgccgttagaactaaagctcataggaatcaagagctcgattatgaagaa
ccagaagaagaggaaatcgaagctaataaggaaccagaggaagatcaaactgataatatt
acaactcttgagccagatgaagaagtacatccgaaagtagatgaagatgaagaattacag
caacaaaatgagcaggaatcagcggaatcgcaaaaggaaaaacaaccagaaacaaacgaa
aggcaagatgatgattggaatccattgcttacgaaaacgttagaaaaagaaaagaaagaa
aaggaaatgttagctaaaaaggctctaacagaatctttggtgaaagaaaaaagttccttt
attgatctctatgattatgatgaagtaaaaaaagaatggtgtagggttgtactcaagttt
cctttaaacacagataaggttgacattgcgtcaattgttgaagaggaagcacgtaaatct
tacatttttaaaattggttcaatcgataaggtattccttgttgaagatcgtgaagcttct
aaacgtggtgttagccatggtaaaatgattaaaaccgaaggagttggattttttgatctc
gttaatatgcaatcaatatttgatcttaatcgagtttacagcaatgacattcatgcaatt
gctaatacttatggtattgaagctgctcgtaaagcaattactattgaaattgctaatgtt
ttcgctgtttatggaattgaagtggatccgagacatctttccctaattgctgattacatg
acgttcaatgggacaatcaaaggaatgaaccgaatttcaatggcgggtagtagctcacct
ttacaacaaatgacttttgagacgacagcagcatttttgaaaagtgctctgcttttagat
tttaaagacgaactcaaatcaccttcggccagaatatttgctggtcgacctcctctagtt
ggaactggtattttaggattgatgcaagatggaacagttgaatataaaccatcacagcat
ctcaggtttaaaaatataaaaaatgactcaaagatatcacctaaaagcgggcgtaaattt
ggaccaagaaatcgtacctcaaatagatttgggaatcttaaacgcaaacaccaaagtcct
aacatttcaatagaaaaacctctgaacaaaagaacgaaatttgattga
DBGET
integrated database retrieval system
