Trichomonas vaginalis: TVAG_2v0232710
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Entry
TVAG_2v0232710 CDS
T01022
Name
(RefSeq) mRNA transport
KO
K12879
THO complex subunit 2
Organism
tva
Trichomonas vaginalis
Pathway
tva03013
Nucleocytoplasmic transport
tva03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TVAG_2v0232710
09122 Translation
03013 Nucleocytoplasmic transport
TVAG_2v0232710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
TVAG_2v0232710
03041 Spliceosome [BR:
tva03041
]
TVAG_2v0232710
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
TVAG_2v0232710
Spliceosome [BR:
tva03041
]
Complex C
Other components
EJC/TREX
TVAG_2v0232710
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
TVAG_2v0232710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
Motif
Other DBs
NCBI-GeneID:
4758754
NCBI-ProteinID:
XP_001313864
UniProt:
A2F2B6
LinkDB
All DBs
Position
IV:36507219..36510730
Genome browser
AA seq
1025 aa
AA seq
DB search
MIQAFKKEDYAKVSEIIHNFLQRNDESQDQTADDIFSTNVNLSVISSVFWTFINISKNSP
YETRIKLLGIAIVSRYPTIVPYFLLTMDKNDWSSMGITNIKSFMNYFKSFYQSSSFNQNQ
FFKDCPEGFARLLLSIYNGKYDDLVQICGGYRIDPNVALDIVFEVFDSNPTNDIFNLIKQ
FPSLRVYQFLLHRMKTQFTAGVSRIVGYFYENELFNDKFLLSLYTTQKEAFFGLYKYYQQ
SAKRFCDELMKPLTIFPGESKESSYKASYIEARRRFNEAKDVIESFPLFLMLKKLEGDDF
IHALKVLSKFDPCQIEGILNSVKKIVLDSLETENLKYDLLIYLGGHECDPNFVNMILDIP
DLDPMIYSYFILPAIAMSDVPWQLSVKLFENLKSRFTFAQRREIYDNFDKFQSVCVEQML
IVSNTIRKISFTMRRVTKDTASKFAPKFSRLMLRSPEKTARGLIEFIGDKVPYDNDTVIN
LVSCLSPLSYDMLLGTFLRSIDQKLIVAAGKNVSDWPQDIATFLSNVFRANYKDMDLPAY
VNILHTGIVNMSTAHVCLFGRLVERMCGVEYRGNLTPQQYNERYADNYLNTKRRVLTDDV
SASESFTRRSKYMKDCLHENDIGVKIIAALDVMKRQLPSLSETDSLSDRLDQIQFTIIES
CEPMDLMAMKIMPNEIIEEHGLSLECAFHLARQSCTEESARQLSPPEIPSDLFEMFWRLS
PSDFHVPNKFVDKVIQDWQERASKVADKAVIDMNIAILTASRERQQKRSDKNYEKMRERG
TEWFKDDNDYWNFVKLCVIPRTLFSEYDAVFSAFFVNALFHTVEHIDVMKLLNAVLRNLH
FIVYSSTIEEAHSFAIFIVKVLKSIRYMEEREEINNIFLDKLMILLRRLEINCLLNTIEV
CYTVSKEFPEKEEHFDAIFAELEEISKEYDPPPEILKLKMISYTNQLKVIREQKQAKRKE
KEEKEKAAKSEIAKEETRQAREKAAKEEEERRRRQKVDARRSGPHIDDKRRSAPPPIDDK
GRRYS
NT seq
3076 nt
NT seq
+upstream
nt +downstream
nt
atgattcaggctttcaagaaggaggattatgcaaaagtaagtgaaataatccataatttt
cttcagcgaaacgatgaaagccaggatcaaacagcagatgatattttttcaacaaatgta
aatttaagtgtaatatcttctgttttctggacatttatcaatatttcaaaaaattcgccc
tatgaaacccgcattaaactacttgggattgctattgtaagtaggtatccaacaattgtt
ccttatttcttgttaacaatggataaaaacgattggagctctatgggcattacaaatatc
aaaagcttcatgaattatttcaagtcattttatcaaagcagcagttttaatcaaaatcaa
tttttcaaagattgtcctgaaggttttgcacgacttttactctctatttacaatggtaag
tatgatgatttagtccaaatatgcggcggatacagaatagatccaaatgtagctcttgat
attgttttcgaagttttcgattcaaatccaaccaatgacattttcaaccttatcaagcaa
tttccgtcactcagagtttatcaattcctcttacatcgtatgaaaactcaatttacagcc
ggtgtcagcagaatcgttggttatttttacgaaaatgaattgtttaacgataagtttctt
ctttccctatatactactcaaaaagaagccttctttggcctttataaatattatcaacaa
tcagcaaaacgattttgcgatgaactgatgaagccattgacaatatttccaggtgaatcc
aaggaaagttcatacaaagcttcatatatcgaagctagaagaagatttaatgaagccaaa
gacgtaattgagtcatttccgttatttttgatgctcaagaagcttgaaggtgatgatttc
atccatgctttgaaggtcctttccaaatttgatccatgccaaatagaaggaatccttaat
tccgtcaaaaagatagttttagactctttggagacagaaaatctgaaatatgacctctta
atttatcttggaggtcatgaatgcgatccaaacttcgtcaatatgattttggatattcca
gacttggatccaatgatttattcatacttcattcttcccgctatcgccatgagtgatgtt
ccatggcagttgtcagtcaaactctttgaaaatctcaaatccagattcacatttgcccaa
agacgcgaaatctacgacaatttcgacaaattccaatccgtatgtgtcgaacagatgctc
attgtctcgaatacaatcagaaagatctcattcacaatgagaagagtcacaaaagacaca
gcttccaaatttgctccgaaattttcaagattaatgctgcgatctcccgaaaaaacagct
cgcggacttatagaattcattggcgacaaagtaccatacgacaatgacaccgttatcaat
ttagtctcttgtttatcccctctttcttacgatatgttacttggcacttttcttcgatcg
attgaccaaaaactcattgttgcagcaggaaagaacgtcagtgactggccacaggacatt
gccacgttcttatccaatgtcttcagagctaactataaggatatggacttgccagcgtac
gtaaatatccttcacactggaattgtaaatatgtctacggcccatgtttgtttgtttggt
cggttggtcgaacgtatgtgcggtgtagagtataggggaaatttgactccgcagcagtat
aatgagagatatgctgataactacttgaacactaagcgtcgtgtgttgactgatgatgta
agcgcgagtgaatctttcacaagaagatcgaaatacatgaaggattgcttgcatgagaat
gatatcggtgtgaaaataattgcggcattggatgtaatgaaaagacaattgccttctctc
tcggaaacagattctttatctgatagacttgatcaaatccagtttaccataatagaaagc
tgtgaaccgatggatctgatggcaatgaagatcatgccgaatgaaattatcgaagaacat
ggcttatctttggaatgtgcttttcatttagcaagacaatcatgcacagaagagtctgct
cgccagttgagtcctccagagattccatctgatttatttgagatgttttggagactgtcg
ccaagcgatttccacgttccaaacaaatttgtcgacaaagtcatccaagactggcaagaa
agagcctccaaagttgctgacaaagcagtaatcgacatgaatatcgctatcctaacagcc
agtcgcgaaagacaacaaaagaggtcggataagaattacgaaaaaatgagagaaagaggt
acggaatggttcaaagatgacaacgactactggaatttcgtcaaattatgcgtcattccc
cgtacattattctcagaatacgatgcagtcttctccgccttctttgttaacgctcttttc
cataccgttgagcatattgacgtcatgaaactgttaaatgccgtacttaggaacttgcat
ttcatagtttattcaagtacaatcgaagaagctcacagttttgcgattttcattgtcaaa
gtacttaaaagtatcaggtacatggaagaaagagaggaaataaacaatattttccttgac
aaattgatgatattgttaagaagactcgaaatcaactgtttgttgaatacaatcgaagtc
tgttacacagtatccaaggaattccctgaaaaagaagaacatttcgatgcaattttcgct
gaattagaagaaatttccaaagaatacgatccaccacctgaaattttgaagctgaaaatg
atttcatacacgaatcagctcaaagtcatcagggaacagaaacaagccaagcgaaaggag
aaagaagaaaaagagaaagcagcgaaatccgaaattgcaaaagaagaaacgagacaagcg
agagaaaaagcagcgaaagaagaggaagaaagaaggagaagacagaaagttgatgccaga
agaagtggtccacacattgatgacaagagaagatctgctcctcctccaattgacgacaaa
ggaagaagatactcca
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