Trichomonas vaginalis: TVAG_2v0927960
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Entry
TVAG_2v0927960 CDS
T01022
Name
(RefSeq) ATP-dependent helicase BRM family
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
tva
Trichomonas vaginalis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tva03021
]
TVAG_2v0927960
03036 Chromosome and associated proteins [BR:
tva03036
]
TVAG_2v0927960
Transcription machinery [BR:
tva03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
TVAG_2v0927960
RSC complex
TVAG_2v0927960
Chromosome and associated proteins [BR:
tva03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
TVAG_2v0927960
SWI/SNF complex
TVAG_2v0927960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
ResIII
DEAD
AcMNPV_Ac109
Motif
Other DBs
NCBI-GeneID:
4749749
NCBI-ProteinID:
XP_001304972
UniProt:
A2FSS0
LinkDB
All DBs
Position
I:complement(4413220..4416742)
Genome browser
AA seq
1107 aa
AA seq
DB search
MSTSINLPSELDIDMIIQWIKSECSRPNFDSNSPEFQAAIAVVAANDRFRQADSLKILKP
EETFLHDTEESSQDTVTKMLRVAMFRNVIRKYQVPPQIQRGVMPIPTKDQPVLTDNSVSS
LQYLTPHTQAKAMQPTALNAFRAAFLNGEGQPPEFLAERRMAILVAAKAQKGQNEAGKMT
AAYSDAVIAPEVKIISAYKEQLKLRQDVVKFTLDPLGYNLPDYASRMLVSKSENYHTISP
QHIGIHAVYDIVTSVERSKKSTRMNLLQQQANLFRKNLNSKFKSLAELNHALSIKFKNSE
KEKKGKNSESARLQALRKNNFEEYRRLVDQMKDDRIKMLLEKTDKYMKDLTEKIKTSNAT
ITEGATSSNPYNLGLKPQENVTQPQHLNGQLKDYQLKGLQWLVSLYLSHLNGILADEMGL
GKTIQSIALLAWLMENRKDYGPHLICGPLTTLSNWYSEFNKWLPAFNVVQYTGTPAERKQ
KANSYLVRGSNVNVVLTSYEFATRDKATLGRLDYSYLIIDEAHRLKNDQGKLGQALSAYK
CGNRLLLTGTPLQNNPRELWSLLNFVLPNIFNDHSQFEEWFSAPFSKAGGDVSLTGEEQF
LVISQLHNVLRPFLFRRTTAQVATELPKMRECKLLCAMSAWQKVVYNTLVTESSVVHSMD
HIQRLDNTTMQLRKCCNHPYLFYDTWFVNLDLVRTSGKCEVLDRILPKLKATGHRILIFS
QMTEVLTLLQDLLTWRDYKYLRLDGNTKSDQRQQLIADFNKEDSEYFIFLLSTRAGGLGL
NLQTADTVILYDNDWNPFADQQARSRVHRIGQEKPVLVISLVTAGSIEERVVERADDKKT
VENKIIEIGRFDDSSNLDERKRLYQRLVDQSTTEDNSGAHSSEQINRMIARSPEEYEIFQ
KMDVERNQALQKQWIDAGRQGKYPSLITFEELPDFLKVPFSVLKKDESLPSIRKSRSSTF
SIAKLENMTDSEYTRMIDRGEDPTDHIEEIEVRNEQMSNLLQKVKTVCQSYFDVLPTPEQ
NPIYYQVISNPITLLQISQRVSGGDYDTLDDFVADLRLMANNAQRFNEVESIYYSIASQI
LQMCDEAVNKGTVQREIQESEEPIDFD
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgagtacatcaatcaatctcccatcggagcttgatattgatatgattattcaatggatt
aaatcagagtgttcgcgaccgaatttcgattcgaactcgcctgagtttcaagctgcaatt
gcagttgtggctgcaaatgatagattcaggcaagcggattctctaaaaattctcaagcca
gaagaaacatttcttcatgataccgaagaatcaagtcaggatactgttacaaaaatgctt
cgtgtcgcaatgtttagaaacgttattcgcaaatatcaagttccgcctcaaatacagcgt
ggcgtcatgccaattccaacgaaagatcagccagttcttactgataactctgtttcttcg
ttgcaatatttaacaccgcatactcaagcaaaagccatgcagcccacagcattgaatgcg
ttcagagcggcattcctcaatggcgaaggccagcctcctgaattccttgctgaaaggaga
atggcaattcttgttgctgcgaaggcccaaaagggccaaaatgaagctggcaagatgaca
gccgcttatagtgacgccgtcatcgctccagaagtcaaaatcatttcagcgtataaagaa
caacttaaattacgtcaggatgtagttaaattcactttggatccattaggttataacctt
cctgattacgcatctcgtatgctagtttcgaagtcagaaaactatcatacgatatctcca
caacatatcggtatccatgcggtgtatgacattgtcaccagcgttgagagatcgaagaaa
tcgactaggatgaatttacttcagcagcaagcaaatcttttccgaaagaatcttaattcg
aaatttaaatcgcttgctgagctcaaccatgcactttccatcaaattcaagaactccgag
aaggaaaagaagggcaagaacagcgaatcagcccgtttgcaagctcttagaaagaataat
ttcgaagaataccgtcgactcgtcgatcagatgaaagatgatcgtattaagatgctctta
gagaaaacagataaatacatgaaagatcttaccgaaaaaatcaaaacttcgaacgctaca
atcacagaaggcgctacaagctcgaatccttacaatcttggcttgaaacctcaagaaaat
gttacacagcctcagcacctcaacggacaactcaaagattaccaattgaaaggtttacaa
tggcttgtttcattgtatctttcacatctcaacggaatccttgccgatgagatgggtctt
ggtaagacaatccaaagtatcgcgttgcttgcctggctgatggaaaatcgaaaagattac
ggacctcatttaatttgtggccctctgacaacattatcgaactggtatagcgaatttaac
aaatggctacccgcattcaacgtcgtacagtatacaggaacccctgcggagagaaaacaa
aaagcaaattcatatctcgttaggggaagcaatgtaaacgttgttttgactagctacgag
tttgctacccgtgataaagctactcttggccgcttggattactcctatctgattattgat
gaagcccatcgtcttaaaaacgaccaaggcaagctcggccaagctctcagcgcctacaaa
tgcgggaacagattattgcttacaggtacgccccttcaaaataaccctagagaactttgg
tcgttattaaacttcgttttaccgaacattttcaacgatcactcccaattcgaagagtgg
ttctccgctccattctccaaagcaggcggagacgtctcattaaccggagaagaacagttc
cttgttatatcccaacttcataacgtccttagacccttccttttccgtcgtactaccgcg
caagttgccacagagcttcctaagatgcgcgaatgcaagcttttgtgcgcgatgtccgct
tggcaaaaagttgtatacaatactttagttacagagtcatctgttgttcattccatggac
cacatccaacgccttgataacacgaccatgcagctccgtaaatgctgcaaccatccctac
ttattctacgatacatggtttgtaaacttggatttagttagaacatccggaaaatgcgaa
gttctcgaccgaattcttccgaaactcaaagcaacaggccacagaattctcattttctcc
caaatgacagaagtattaacattattacaagatcttttgacatggagagactacaaatac
cttagattggatggcaacaccaaatcagaccaacgccagcagctcattgccgatttcaac
aaagaagattcagaatatttcatctttttgttgagtactcgtgcaggaggccttggtttg
aatctccagaccgcagatacagttatcctctacgataacgactggaatccttttgcagac
cagcaagcgaggtcaagagtccacagaattggccaagaaaaaccggttttggtcatttca
cttgtcactgccggttccattgaagagcgcgttgtcgaaagggccgatgacaagaagact
gttgaaaacaagatcatagagatcggcaggttcgatgattcctccaatttggacgagcga
aagagattgtatcaaagattggtcgaccaatcaacgacagaagacaattccggtgcacat
tctagcgagcaaatcaacaggatgattgcaaggagtcctgaagaatacgagatcttccag
aagatggatgtcgagcgaaaccaggcccttcagaaacaatggatcgatgcgggaagacaa
ggaaaatatccttcattgattacgttcgaagaattacctgatttcttaaaagtgccattt
tctgttttgaaaaaggatgaatctttgccttctatccgcaaatctaggtcttctactttc
tccatcgcaaagcttgagaacatgactgatagcgagtacacaaggatgattgatagaggt
gaagatccaacagatcacatcgaagaaatagaagtaagaaatgaacaaatgtcaaatttg
cttcaaaaagtcaaaaccgtttgtcaatcttatttcgatgttcttccaacaccagaacag
aacccgatctactaccaggtgatatccaatccaataacattgttgcagatatcgcagaga
gtaagcggcggagattacgacactttggatgatttcgtcgccgatttgagattgatggca
aacaacgcacaaagatttaatgaagttgagtctatttattactcaattgcttctcagata
ctacagatgtgcgatgaagccgtaaataaaggaactgtacagagagaaatacaagaatct
gaagaaccaattgatttcgattga
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