Tachysurus vachellii: 132846958
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Entry
132846958 CDS
T09596
Symbol
cdh23
Name
(RefSeq) cadherin-23
KO
K06813
cadherin 23
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tvc03037
]
132846958 (cdh23)
04515 Cell adhesion molecules [BR:
tvc04515
]
132846958 (cdh23)
Cilium and associated proteins [BR:
tvc03037
]
Primary cilia and associated proteins
USH complex and associated proteins
132846958 (cdh23)
Cell adhesion molecules [BR:
tvc04515
]
Cadherins
Major cadherins
132846958 (cdh23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
132846958
NCBI-ProteinID:
XP_060727772
LinkDB
All DBs
Position
6:3490005..3527274
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AA seq
1925 aa
AA seq
DB search
MVTARDKDAGRNGLVNFTLVAGNMRDIFEIRTINNTFGDIYVNAALDREAVDRYLLKVRA
IDNGSPPRFTDHSLTVNIVDVNDNAPVIQSPRGYNVSVSENVGGGTSVLRVVATDRDIGP
NAVLSYYITNGNQDLTFRMDRMSGEIVTRPSPPDRERQQQYTLTVTVEDDGTPPLSTSTT
VWVYIIDENDNAPAFAAKEYVTILTEGPDTVGATIATVTASDPDEGLNGTLRYAITLGNV
AQTFSISPTTGRITVMREVDYEISSGRYTLIITATDQCPISQLRLTSSATVLVNVIDVND
VTPQFPRPFEGPFEITEGQPGPRVSILKAVDEDSGLNGKVEYSITAGDPNNEFIVSPVEG
ELRVRRDVELDRETTAYYNITVTAKDLGTPPRSSTVIVGVVVLDINDNDPILLNLPLNTS
VSEGASVQTSIARVRAQDIDSGRNALLTFTITAGNPDGAFYINETSGVVQVNRPLDRERV
AEYTLTITVKDNPENPRIARRDSENLVVSIVDVNDNRPIFTSSSYRGEISENSPMGTTVL
ILNGPVLATDRDIGPNAVVKYGLIGPRVDLFTINPTTAVVSVREGAMLDREAFFDPRVEL
FLVSEDIGGLNSSVPLTITILDRNDNPPVFSPSSFTVRLPENSPTGVVVTQLSATDADAG
SNGWLQYRLESGAQDRFVVDTVSGAVLVGNATLDREERGSYRLVVVATDRGSPPLSGTAT
LTVVLDDVNDSRPRFLQPVQTISVNESTPPGEVVATLAAEDPDLRPRLEYYIISVEARDD
GNNQVRGLQDSFGIDFHTGAVFVRNPLNRELVATFEIIVSVHDNASDIIDMSVSVPNARL
TISVLDVNDNTPRFRPFGVTNFSESILEGAQPGTTLLSVSAVDPDKGPNGQIFYELLNLP
RGGYIRLEDPSTGKIIANRTVDYEQVNWLNFTVRVQDRGSPPRSSELPVYLRIVDVNDNN
PVFTQPSYQRPVFEDVALGTIIVRVSATDADSGLFAVIEYGLVDGEGKFGITPSTGDIYI
LSPLDRETKDHYTLTAVARDNPGGSPNNRRENSVQVLVTVLDVNDFRPRFSERVFSTTVF
ENEPSGTSVITLSATDLDEGENALLTYSLQGPGANAFSLDPDTGLIRSLRLLNSFERFNL
TVVATDQGRPPLWGTALLQITIVDVNDNRPVFVRPANGTIMHILEEQPPGLVVYEVFATD
EDEGVNGEVRYSFLQTGAGNRDWENFRIDSITGVITTAVKLDREKQALYSLIVVAYDLGQ
PVPYETTQPLQVALSDIDDNEPVFLKPPRGGLLFQSISVPEHSPSGTVVGNVTGAVDADE
GSNAVVYYFIAGGDTEGNFGLSVTGVLRVKKDLDREEIPVYSIIVKASSNRNWTPPRGQR
SQRNRVALDPSRDPTLQEVRIYLEDINDQPPRFTKLEYTAGVAADAKVGSDLIRVQAIDN
DIGNNSLVLYHILSIRYIKLQSNESEDIGNVFIIGETDGIIRTFDLFTAYDPGYFVVEVL
ARDLAGHSDVALVGIYILRDDQRVKLIINEIPERVWLFQEEFINLLSNITGAIVNMDDVQ
FHVDKKGRVNFAQTDVLIHVVNKQTNRILDVERVIQMIDENKEQLRNLFRNYNILDVQPA
VSGRAPDDLTTLQMAIIILAVLLFLAAMLFIFMNWYYRTVHKRKLKAIVAGSTGNQGLMD
ILDMPNTNKYSFEGANPVWLDPFCRNMELAAQAEHEDDLPENLSDIADLWNSPARTHGTF
GREPQASKPEDDCYLRAAIQEYDNIAKLGQIMREGPIKGSLLNVVLDDYLRLKKLFAARL
VTKSTSQDRSSITELVQSDLDDDDDERMSIGGRGTLRFKHKHPVELRGPDGVHVVHGSTG
TLLTSDLNSLPEDDQRALARSLEALHADGTLYAERNARTESAKSTPLHRKGGNSLSESPL
EITEL
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atggtgacggcacgggataaagacgccgggaggaacggactggtgaactttacactggtg
gcagggaacatgagggatatatttgagatccgaaccatcaacaacacatttggagacatt
tatgtaaacgctgctcttgaccgagaagcagtggaccgttatctgctgaaggtgcgggcc
atagataacggctctcctcctcggtttacggatcattctcttactgtgaatattgtggac
gtaaacgataatgctccagtcatccagagccctcgtggctacaatgtcagcgttagtgag
aacgtaggtggtggtacgtcggttctgcgtgtcgtcgctacagatcgagacattgggcct
aatgctgtgctgtcatattacatcacaaacgggaaccaagatttgacgttccgcatggac
cgcatgagcggagagatcgtgaccagaccttcacctcctgacagagagagacagcagcag
tacacactcactgtcacagtggaggatgacggaacacctccactatcgacctccaccacg
gtgtgggtttatataattgatgagaatgacaacgccccagcttttgctgcaaaagagtac
gtaaccattctcaccgagggccctgacacggtaggagccaccatcgctacggtaacagcc
tccgatcccgatgaaggactgaatgggactctgcgctatgccatcaccttgggcaatgtg
gctcaaactttcagcatcagcccgaccacgggccggatcacagtgatgagagaggtggat
tatgagatcagtagtggacgctacacactgatcatcactgctactgatcaatgtccaata
tcccagctcagattgacatctagtgccactgtgctggtgaatgtgatcgatgtgaatgac
gtgaccccacagtttccaaggcccttcgagggcccttttgagatcacagagggccagccg
gggcctcgagtcagcatactgaaggctgttgatgaagactcaggtcttaatggaaaagtg
gaatacagcatcacagccggagaccccaacaatgagtttatagtgtctcctgtggaggga
gaactgagagtcagaagagatgttgaactggacagagagactacagcttattataacatc
acagttactgctaaagacctgggaacacccccacgtagcagcacggtgatcgtgggtgtt
gttgtactggatattaatgataacgaccctatattactgaacttgcccctgaacaccagt
gtgagtgaaggagcatctgtccagacatccatcgcacgggtgcgagcacaggacatcgac
agtggacgcaatgctctcctaacattcaccatcacagcaggcaatccagatggagctttc
tacatcaacgaaacttcaggtgtggttcaggtgaacagacccttggacagagagagagtt
gcagaatatacactgactatcacagtgaaggacaacccagagaacccacgtattgctcga
agggactcagaaaatctggtggtctccattgtggatgttaatgacaacaggccaatcttc
acatcgtcaagctacagaggagagatcagtgagaattcgcccatgggtaccactgtgcta
atcttgaatgggcctgttctggctacagacagagatattggacccaatgctgtggtaaaa
tatggcctgattggcccaagggtggatcttttcaccatcaaccctacgacagctgtagtg
tcagtgcgtgagggtgccatgttggacagggaagccttctttgatccacgagtggaattg
ttcttagtcagtgaagacattggtggtctaaacagcagtgttcctctcaccatcaccatc
ctggacaggaacgacaatcctccagtgttcagcccttccagcttcacagtgcgtctgcca
gaaaacagtcctactggtgtggtagtgactcagctctcggccacggatgccgacgcaggc
tccaacggttggttgcagtaccgtttagagagtggcgctcaggaccgtttcgtggtcgat
accgtctctggtgctgtccttgtaggcaatgccacacttgaccgtgaggagcgtggctct
taccggctggtcgtcgttgcgacagatcggggctcgccaccgctctcaggcacagccaca
ttgaccgtcgttttggacgacgtaaatgactctcggcctcgtttcttgcagcctgtgcaa
actataagtgttaatgagtcaactcctcctggcgaagtggtggccactttagctgctgag
gaccctgacctccgaccccgtttggagtattatatcatctctgtggaagcgagagatgat
ggaaataaccaggtgcgcggtctgcaggactcatttggtatcgactttcacacaggtgct
gtatttgtacgaaaccctttaaacagagagctggtagctacttttgagatcatagtgtca
gtgcatgacaacgcgagtgacattattgacatgtcagtcagcgtgcccaatgccagactg
accatcagcgtgctggacgtgaacgacaacactccccgttttcgtccattcggggtcacc
aacttctccgaaagcattctggaaggagctcaacccggcaccactctgctctcagtgtcc
gctgtcgatccagacaaaggcccaaatggtcagatcttttatgagcttttaaatctgccc
agaggaggatatatcagactggaggacccttctaccggtaagattatcgccaaccgtaca
gtggattatgagcaggtaaactggttgaacttcacggtgcgcgttcaggatcggggcagt
ccaccgcgctcgtctgaacttcctgtttatctacgtatcgtcgatgtaaatgacaacaac
cctgtcttcacccagccgtcatatcagaggccagtatttgaggatgtggctctgggcacc
atcattgtgcgagtgagtgctacagacgcagactctggactgtttgccgtgatagagtac
gggctggtcgacggagagggcaagtttggaatcactccatctacaggggacatctacatc
ctgtctccactggatcgagagactaaagaccactacacacttactgctgtagccagggac
aatcctggaggtagccccaacaaccgccgggaaaattcagttcaggttctggtgacggtg
ctcgacgtgaatgatttccgaccgcgattctcagagcgtgtgttcagcaccaccgtgttt
gagaatgagccgagcggcacgtctgtgatcactctgtcagctacagacctggacgaggga
gagaatgccctgctcacttacagcctacaaggacctggagccaacgcgttctctctagat
cccgacactggtctgatccgttctctgcgtttgctgaacagttttgagaggtttaacctg
acagtcgtggcgacggatcagggtcgtccgcctctctggggcacagcgcttctccagatc
accattgtcgacgtaaatgacaacagacccgtctttgtcagaccggctaacggcaccatc
atgcacatcctcgaggagcagccgccgggtctggtggtgtatgaggtgtttgcgacagat
gaggatgaaggtgtgaatggagaggtacgttatagtttcctgcagaccggagcaggaaac
cgggactgggagaatttccgtatcgactccatcaccggcgttatcaccaccgcggttaaa
ctggatcgagaaaagcaggcactctatagtttgattgtggtagcttacgacctcgggcag
cctgtgccgtatgagacgactcagcctctgcaggtggctctgtctgatatcgatgacaat
gagcctgtattcctcaaaccaccgagaggtggtctgttgtttcagtctatttctgtccct
gagcactcgccctctggcacagtggtgggcaatgttacaggagcggtggatgcagatgaa
ggctccaatgctgtggtttactatttcattgcaggtggcgacaccgagggaaactttgga
ttgagcgtgacaggagttttgcgagtgaaaaaggacctggaccgagaggaaatcccggtg
tactctattattgtcaaagcctccagcaacaggaactggacaccaccgagaggtcaaagg
tcacagcgaaaccgcgttgcgcttgacccgagtcgtgacccgaccctacaggaagtccgg
atctacctcgaagacatcaacgatcagccgccgaggttcaccaagctggagtacactgca
ggtgtagcagcagacgctaaagtcggttcagatcttattcgggttcaagccatcgataac
gacattggcaacaacagccttgtactttatcacattctgtccatccgttacatcaaactg
cagtcgaacgagtcagaggacatcggcaacgtcttcatcatcggcgagacagatggtata
attcgaacgttcgacctcttcaccgcctatgatccgggctattttgtggtggaagtgttg
gcacgtgacctggcaggacacagtgacgtggcactggtgggcatctacatcctgagagac
gaccagagagtgaagctcatcatcaacgagatccctgaacgtgtctggctcttccaggag
gagtttattaacctgctctcgaacatcacaggggccatagtcaacatggatgacgtacag
ttccatgtggataaaaaaggcagagtaaactttgctcaaaccgatgttctgattcacgtg
gtcaacaaacagaccaaccgcatcctggacgtggagagggtcattcagatgattgacgag
aataaagaacagctgagaaatctgttcaggaactacaacatcctggatgtccagcctgcc
gtgagtggacgagcccctgatgacctcactacccttcagatggctataataatcctggct
gtgctgctgtttctggctgctatgctgtttatcttcatgaactggtattacaggacagtt
cacaagaggaagctgaaagccatagtcgctggttctacaggcaaccagggactgatggac
atcctcgatatgcccaacactaacaagtactcgtttgagggagccaaccctgtatggctg
gatcctttctgtcgaaacatggagctggctgctcaggctgagcacgaagacgacctgccc
gagaacctgagtgacatcgcagatctgtggaacagcccagctcgaactcacggtactttc
ggtcgtgagcctcaggcctctaaaccagaggacgattgctacctcagagctgccatacag
gagtatgataacattgccaagctgggacaaatcatgcgtgagggacccattaagggctcg
ctgctcaacgtggtgttggatgattatctgagactcaaaaagctctttgccgcacgcctg
gtcaccaagtcgaccagccaagaccggtcgtccatcacggagctggtccagagcgacctc
gacgatgacgacgacgagcggatgagcatcggaggacgaggaacgctgagattcaagcac
aaacaccccgtggagctgcgcggcccagacggagtccatgtggtccatggcagcacaggc
acactattgacctctgacctcaacagcttgccagaagatgaccaacgggcgctggcacgc
tctctggaggctctgcacgcagacggcacgctgtatgccgagagaaatgcccgcaccgag
tcggccaaatccacaccgctgcaccgcaagggaggcaactccctttcagagagcccactg
gaaatcacagagctctga
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