Tachysurus vachellii: 132850967
Help
Entry
132850967 CDS
T09596
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
tvc
Tachysurus vachellii
Pathway
tvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132850967 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132850967 (exosc5)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132850967 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
132850967
NCBI-ProteinID:
XP_060733446
LinkDB
All DBs
Position
9:complement(5985735..5989773)
Genome browser
AA seq
218 aa
AA seq
DB search
MEPDISSTVLREFGSEQGLLSKPDGSATFMQGDTSVLVGVYGPAEVKVNKEIYDRATLEV
LIQPKAGMPSVRERTREKCVRGTCEAALLSTLHPRSSLTLVLQVVHDDGSLLACCLNGAC
MALMDAGLPMSRLFCGVTCAIDAEGQIITDPTAQQEKESRALLTFAIDSKEHNVMMSSTK
GSFSVNEMQQCIAVSQKASERIFQFYRDSVKRRYSKIL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggagccggacatcagcagtacagttttaagggagtttggcagcgaacagggtttatta
tccaaacctgacggttccgcgacgtttatgcaaggagacaccagtgtgttagtaggtgtg
tatggacctgctgaggttaaagtcaacaaggagatctatgatcgagcaactctggaggtt
ctgatccagcccaaagccggcatgccgagtgtccgggagcgcacgagagagaagtgtgtg
cgggggacgtgtgaagctgctctgctgtccacgcttcatcctcgctcctccctgacgcta
gtcctgcaggtggtgcacgatgatggatcgctgttagcgtgctgtctgaacggtgcctgc
atggcgctgatggacgccgggctgcccatgagccgcttgttctgcggagtcacgtgtgcc
atcgacgccgagggacaaatcatcacagaccccaccgctcagcaggaaaaggaaagtcga
gccctgttgacttttgccatcgatagcaaagagcacaatgtcatgatgtcatcaaccaaa
ggttctttctcagtgaacgagatgcagcagtgtatagcagtgagccagaaggcgtccgag
cggatcttccagttttatagggattctgtgaagcgacgatactccaaaatattatga
DBGET
integrated database retrieval system
