Tachysurus vachellii: 132852699
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Entry
132852699 CDS
T09596
Symbol
ncanb
Name
(RefSeq) neurocan core protein isoform X1
KO
K06794
neurocan core protein
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tvc00535
]
132852699 (ncanb)
00536 Glycosaminoglycan binding proteins [BR:
tvc00536
]
132852699 (ncanb)
04091 Lectins [BR:
tvc04091
]
132852699 (ncanb)
Proteoglycans [BR:
tvc00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
132852699 (ncanb)
Glycosaminoglycan binding proteins [BR:
tvc00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
132852699 (ncanb)
Lectins [BR:
tvc04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
132852699 (ncanb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
Sushi
hEGF
EGF_2
EGF_CA
Ig_3
UL45
I-set
Motif
Other DBs
NCBI-GeneID:
132852699
NCBI-ProteinID:
XP_060736051
LinkDB
All DBs
Position
1:complement(26105624..26198676)
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AA seq
1262 aa
AA seq
DB search
MLTECRVSGLQSFLTVLLLVTLEQDMVWGETVVNMRKVTHQVEKIPLSETALLPCIFTLR
PNPSHETHDTPRIKWTKIWGHRGLDGLQREQSVLVAKGNVVKVKKAFQGRVTLPGYTENR
YNASLALTGLRSSDSGMYRCEVVVGLNDEQDTVPLQVVGTVFHYRAPHDRYALSFVDAKQ
ACVENSAVIATPGQLQATFDDGYDNCDAGWLSDQTVRYPIQSPRPGCFGDREDSPGVRNY
GNRDTDELFDVYCFAESLRGEVFHTSIPDKLSLSTASTHCHTLGAQLATVGQLYLAWQAG
LDRCDPGWLADGSVRYPINQPRRNCGGDEPGVRTLYHNPNRTGFPDSASRFDAYCYRENQ
PEAMALVQTSSSSNSTDDWEQLQQNGGFPHPSTWTGLVDLDKEDFNSIADNESSEISGEH
VVIHLRSKERPVGQEMPVSNDQPLHVLELNGGSAREESDEREVTEDHRLSLEPSMTTASS
PTETQTSNNMLFNLVDSIMRPWKYWKGNGETVAPSMVSSVLKETSEEFQTTRVKPGGELR
GTKGSIDNAILEPESMPTNPSTLYSEEGLLEQEKEVVLSVPVIELKNPSKLHPEPSVSQP
TAYRGLIATGRMKVMNPTAATSPLGSRSSFGSMQVQQEWALQSLSVYATPSSNGILTTQK
SGPVKTKQEAMEIMTIPVIGDNHENYSGEGKDHIEESYSLPKLSTSQSSPQPGISEEEND
TEVSGGNELFIISSPTKQGTPEASEVQNVLIQTTVQWELLPLPSRQPSHSPSVSKDTMGH
EEARGEILYMHHTTEKSGSIPFKTMKVPLVKKKMNPNTPSASETLYTDVAITSELTTKAS
STTDQMPGTSTMTTINGHIQNTDTSTSGNIVSATDPTISVTWIPVVQEETQEPQTHVSTV
TDVRLETTSNTFILTTHVEETSQQAESKPAPTTGSTSGDNTSKTAVDYENSSAPSSAEEE
PCQTNPCLHGGSCLREGEGYSCLCPLGYYGESCEIDIDECQSNPCQNGGTCIDEINSFVC
LCLPSYGGATCEKDTEGCDHNWRKFHGHCYRYFTHRLNWEDAEKDCREHNGHLASIHTRE
EQDFINSMSHENTWIGLNDRTVEEDFHWTDNMDLQYENWRENQPDNFFAGGEDCVVMIAH
ENGKWNDVPCNYKLPYICKKGTVLCGPPPLLDNAFLIGRKRSHYDIHSVVRYQCADGFLQ
RHIPTTKCRASGKWDHPKILCTKSRRSHRYRRHHHKSHHERRKHKKHGSGGHRGRQEGHG
HF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgttgacagagtgtcgtgtgtctgggcttcagtctttcttgactgtgttgctgcttgtc
actctggaacaagatatggtatggggtgaaactgtagtaaacatgcggaaagtgactcac
caggtagaaaagatacctctgtcagagactgctctgctgccctgcatctttactctacgg
cccaacccatctcatgaaactcatgacactccacgcattaagtggaccaaaatctggggc
caccgtgggcttgatgggctgcagagggagcagtctgtattggtggcaaaaggcaacgtg
gtgaaagtgaagaaagcctttcagggacgtgtcaccctgcccggctacacagaaaaccgc
tacaatgccagcctggctctgacaggcctgagatccagcgactcgggcatgtaccgctgt
gaggtagtggtgggccttaacgacgaacaagacacagtgcctctccaggtcgtaggtacg
gtcttccactaccgagcccctcacgaccgctatgccttgtcattcgttgatgctaagcag
gcatgtgtagaaaactctgcagtgatcgcaacacctgggcagctgcaggctacttttgat
gatggttatgataactgtgacgcaggctggctctctgaccagactgtaaggtatcccatc
caatctccacggcctggctgctttggagaccgggaagactcacctggtgtgagaaactat
ggcaatcgtgacactgatgagctgtttgatgtgtattgctttgcggagagcctcagaggt
gaagtgttccataccagcataccagataagttgagtctgtccacagcttccactcactgt
cacacattaggcgctcagctagccacagtggggcagctttacttggcttggcaggctgga
ctggaccgctgtgacccaggctggctggctgacggtagtgttcgctaccccatcaatcaa
ccacggcgcaattgtggaggcgatgagccaggagtacgcaccctctaccataaccctaac
cgcactggatttcctgacagtgccagccgctttgatgcctactgctacagagagaatcag
ccagaagcaatggcacttgtgcagacttcttcaagctcaaactccacagatgactgggaa
caactccagcagaatggaggctttcctcacccttccacctggactggactggtggacctg
gataaagaagattttaattctattgcagacaacgagtcctctgaaatatcaggagagcat
gtggtaatccatctcaggtctaaagagaggccagtgggtcaggaaatgcctgtgtccaat
gatcagcctcttcatgtcctggagctcaatgggggttcagcaagagaggaatctgatgaa
agagaagtgactgaggaccatagattgtctcttgagccctcaatgaccacagcatcctca
cccacagagactcaaactagcaacaacatgctctttaacttagttgactccatcatgagg
ccctggaaatactggaaaggcaatggagagacagttgccccttcaatggtgtcaagtgta
ttgaaggagacatcagaagaattccagacaaccagggtgaagccagggggtgagcttaga
gggacaaaaggaagtattgataatgcgatcttggagcctgagagtatgccaactaatcca
tccacactatattcagaggaaggacttttagagcaggagaaagaggtggttctctcagta
ccagtaattgagctgaagaatcctagcaaactacaccctgaaccttcagtttcacaacca
acagcatacagaggactaattgcaacaggacgaatgaaggtgatgaatcccacagctgca
acgagtcccctgggttccagaagcagttttggctccatgcaagtgcagcaggaatgggca
ctccagtctctgagcgtatatgctaccccaagcagtaatggtatccttacaacccagaaa
agtggacctgtcaagactaaacaagaggcaatggagatcatgaccattccagtcatcggg
gacaaccatgagaactattctggggaaggcaaggatcatattgaagagagttactcactg
ccaaagttgtctacatcacagtcctctccacaaccagggatttcagaagaggagaacgat
actgaggtgagtggaggaaatgaattatttatcatcagcagtccgacaaaacagggtact
ccagaggcctctgaagtacaaaatgttctcatacaaacgacagtacaatgggagctccta
cctctaccatctagacagccttctcacagtcccagtgtctccaaagacaccatgggtcat
gaggaggccaggggggagatcctctacatgcatcatactacagaaaaatctgggagcatt
ccctttaaaacgatgaaagtgcctttggtcaagaagaaaatgaacccaaacacacccagt
gcatccgaaaccctttatactgatgtggcaatcacttcagaactcaccacaaaagcttca
agtacaactgaccaaatgccaggtaccagcaccatgacaaccattaacggtcatattcaa
aatacagacacaagcacttctggaaatattgtgtccgctacagatcctacaatatctgtt
acttggataccagtggttcaagaagaaactcaagaaccacagacacatgtgtctacagtg
actgatgtaagacttgagactacgagtaacacgtttatactgaccacacatgtggaggaa
acatcccaacaggcagagagtaaaccagctcctaccacaggaagcacaagtggagataac
acaagcaaaactgcagtcgactatgaaaacagctctgcaccttcatcggcagaggaggag
ccttgccagacgaacccgtgtctgcatggggggagctgcttgagagaaggagaaggttac
agctgcctctgccctctgggatactacggagagagctgtgagatcgatatcgatgaatgt
cagtcaaatccatgtcagaatggaggcacctgcattgatgagatcaactcttttgtatgc
ctgtgtttacccagctatggaggagccacgtgtgaaaaagacactgagggttgtgatcat
aactggaggaagttccacggtcattgttacagatactttactcaccgactcaactgggaa
gatgctgagaaagattgcagagagcacaatggccatctggctagcattcacaccagagaa
gagcaggattttatcaacagtatgagccatgaaaacacttggattggtctgaatgacaga
acagtggaggaagatttccattggactgataacatggacctgcaatatgagaactggagg
gagaaccagcctgataatttcttcgcgggaggagaggactgtgtggtgatgatcgcccat
gagaatggcaaatggaatgacgtgccctgcaactacaagctgccctacatctgcaagaaa
ggcacagtgttgtgtggcccaccacccctattggacaatgctttcctgattggccgcaag
cgttcacactatgatatccattcagttgtgcgttatcagtgtgcagatgggtttctccag
cgccatattcccaccaccaagtgccgtgccagtggtaaatgggaccatcccaaaatcctc
tgcacaaaatctcggagatcccatcgctacaggcgccatcatcacaagtctcatcacgag
cgcagaaagcacaagaaacacggctcaggcgggcatcggggtagacaagagggtcatggc
catttctaa
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integrated database retrieval system
