Tachysurus vachellii: 132853295
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Entry
132853295 CDS
T09596
Symbol
cacna1fb
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1F subunit isoform X1
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
tvc
Tachysurus vachellii
Pathway
tvc04010
MAPK signaling pathway
tvc04020
Calcium signaling pathway
tvc04260
Cardiac muscle contraction
tvc04261
Adrenergic signaling in cardiomyocytes
tvc04270
Vascular smooth muscle contraction
tvc04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132853295 (cacna1fb)
04020 Calcium signaling pathway
132853295 (cacna1fb)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
132853295 (cacna1fb)
09153 Circulatory system
04260 Cardiac muscle contraction
132853295 (cacna1fb)
04261 Adrenergic signaling in cardiomyocytes
132853295 (cacna1fb)
04270 Vascular smooth muscle contraction
132853295 (cacna1fb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132853295 (cacna1fb)
Ion channels [BR:
tvc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
132853295 (cacna1fb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
132853295
NCBI-ProteinID:
XP_060736893
LinkDB
All DBs
Position
11:complement(12354433..12399062)
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AA seq
2052 aa
AA seq
DB search
MNEENRKSNGYSKESEEGGGEGEEEEEGGGEGVEREEDEEDDWEDSEKPRINRTDTLNSN
TSSTGTQRKKSQHGKKQVQGSNQVQRAPRALFCLKLNNPIRRAALSIVEWKPFDIFILLA
IFANCVALGVSKPFPEDDSNATNHDLEQVEYIFLVIFTVETFLKILAYGLVMHPSSYIRN
GWNLLDFVIVIVGLFSVVLETATNKSGETHHIPGKPGGLDVKALRAFRVLRPLRLVSGVP
SLQIVLNSIMKAMVPLLHISLLVLFVIIIYAIIGLELFIGRMHKTCYFIGTDDFADDDPV
PCAFTGHGRQCIVNGSECRGKWDGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMND
AIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDL
CGYMDWIMQAEDIDEFNEDGNRRVTLRDLADKKRGKFSWFTHSNETHASLPASETASENT
ENIDEEHTDCCAACCAWIMKNPCCRTLRRWNRGIRRNCRKAVKSVTFYWLVLILVFLNTA
LSASEHYNQPDWLTEVQEIANKVLLSLFTFEMLLKMYSLGLQAYFVAFFNRFDCFVVCGG
ILETVLVEMEIMPPLGISVLRCVRLLRIFKVTRHWTALSNLVASLLNSMKSIASLLLLLF
LFLIIFALLGMQLFGGKFNFDETQTKRSTFDAFPQALLTCFQILTGEDWNMVMYDGIMAY
GGPVFPGMIVCLYFVILFICGNYILLNVFLAIAVDNLAGADGDDKKKEEKKQGEGGEIEE
ENTDAKIDLDEYEEEEEQDEGDGEEGGTQLNVADFAPPKEKVVPIPEGSAFFCLSKTNPI
RVGCHTVINHHIFTNLILVFIILSSISLAAEDPIRAHSFRNNVLGYADYAFTSIFTVEIL
LKMTVYGAFLHKGSFCRNWFNLLDLLVVSVSLVSFFLHSSAISVVKILRVLRVLRPLRAI
NRAKGLKHVVQCVFVAIRTIGNIMIVTALLQFMFACIGVQLFKGKFYRCTDEAKHTPEQC
KGTFVIYKDGDVNHPFVRQRIWHNSEFNFDNVLMGMMALFTVSTFEGWPALLYKAIDANS
ENHGPIYNSHVEISVFFIVYIIIIAFFMMNIFVGFVIITFREQGEAEFKNCELDKNQRQC
VEYALKAQPLKLYIPKNPVQHKFWLMINSTGFEYIMFVLILLNTVTLAVQHYEQSKLFSY
VMDILNMVFTGLFTVEMIVKLLALRLKHYFTDAWNSFDALIVVGSVVDIVVTEFSSSEDS
SRVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFVKSLQALPYVALLIAMIFFIYAVIGMQ
TFGKIALQAYTPINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKRCDAESDFEPG
EEFTCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWS
EYDPEAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVTFNATL
FALVRTALKIKTEGHPDQENVELRIIIKKIWKRTKPKILDEVIPPPAEEEVTVGKFYATF
LIQDYFRKFRKRKEKVGLGDPDPQKPSALQTNTQQNKYTFTLGNLSITASAGLRTLQDLG
PEIRLAMNGDLADEEEDLEEEQEENANENGYVVNAESSDRRSSVVSTPTASSAAVSGEGF
SNGGLSHRNSLTRTLNDSGILEQDKFRRGERRRSSLYLQHKNGVIDQPSKRVSYYKHPRR
GSVDHFSGEEGYPMEQLFYRREEAEEVIAPRDRLGYPDEVPIHSSHRAHGYDGQPTYSNQ
YGSSYGEARRSARRRLLPATPTVRKSSFTIQCLRRQGSSDDLPIPGTYHQNFPPCRARSQ
AYGSYDSRRSSSRSSTGSTASWANSSPRRSRLLYAPLILVEDERSAGTSSMGLWEKKAED
DASVPVAGRAGQPYRAYTTLRVPTQLSPHYSEKRGSADSLVEAVLISEGLGLYAKDPKFV
AFAKREIADACHMTIDEMESAASDLLIRGSTESSGSGLLNHTDLTGLYSDEELVRSHDED
ELADEMTCVTSF
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggagaaccggaaaagtaatgggtactccaaagagtcagaggaaggtggcgga
gaaggggaggaggaggaagagggtggaggagagggggttgagagagaagaggatgaggag
gatgactgggaagacagtgagaagccgaggataaatcgcacagacacactcaactccaac
accagctcaacagggacacaaaggaagaagagccagcatggcaagaagcaggtgcaaggc
tccaaccaggttcagcgagcgccaagagctcttttttgtcttaagctgaacaaccccatc
cgtagggctgcactgtcaatagtcgagtggaaaccttttgatatttttattctcctagcc
atttttgctaactgtgtggctctgggagtatccaagccttttccggaggatgattccaat
gctactaaccatgatctggaacaagtggaatacatctttctggtcatcttcactgtagaa
acctttctaaagattctggcctatggtctggtcatgcaccccagctcctacatccgcaat
ggctggaacctgttagactttgtcatcgtcattgtgggattgttcagtgtagtgttggag
acagcaaccaataaatctggggaaacacatcacataccagggaagccaggaggcctggat
gtgaaagcactcagagctttcagagtcttacgacctctcagacttgtttcaggagtgcca
agtttgcagattgtgctgaactccatcatgaaagctatggttcctttacttcacatctct
cttcttgtcctgtttgtcataatcatctatgcaataattggcctggagctcttcatcggc
cgcatgcacaagacatgctactttatcggcacagatgactttgcagatgatgacccggtt
ccatgtgcattcaccggtcatggtcggcaatgtatcgtaaatggttcagagtgtagagga
aagtgggatgggccgaacggcggcatcactaattttgataatttcttctttgccatgctg
actgttttccagtgcattacgatggagggctggaccgatgttctttactggatgaatgat
gctataggttttgagctgccctgggtctactttgtaagcctggtcatctttggatccttt
tttgtcctcaaccttgtattgggtgtgttgagcggtgaattctctaaggaacgagagaag
gctaaagcacgtggggattttcagaagctacgggagaagcagcagctggaggaggacctg
tgtggctatatggactggatcatgcaggctgaggacattgacgaatttaatgaggacgga
aacagacgtgtgaccctgcgtgacctggctgacaaaaagcgaggaaagttcagctggttc
acccactccaacgagacccacgcaagtcttccagcaagtgaaacagcctcagagaacaca
gaaaatatagatgaagaacacactgactgttgtgctgcttgctgtgcttggataatgaaa
aacccctgctgtcgcacattgcgccggtggaaccgtggcattcggagaaactgtcgaaaa
gctgtgaaatcggtgacattctattggctggtgttgattctggtgtttctcaacacggcc
ctgagcgcatcagagcactataaccaaccagactggctcactgaagtgcaggaaattgcc
aacaaggtgcttctgtcccttttcacatttgagatgttgctgaagatgtacagtctgggg
ctgcaggcttactttgtagctttcttcaatcgttttgactgttttgtggtgtgtggagga
atcctggagactgtgctggtggagatggagatcatgccacctcttggcatttctgtactg
cgctgcgttcggttgcttaggatcttcaaagtcacgcgccattggacagctctttccaat
ctggtagcatctctactaaactctatgaagtccattgcatctttgctgctgttgcttttc
ctcttcctcataatcttcgctctgctggggatgcagctgtttggtggcaagttcaacttt
gatgaaacacagacaaaaagaagcaccttcgatgcttttccccaggcccttcttacctgc
tttcagatcctaacgggtgaggactggaacatggtgatgtacgatggaattatggcatac
ggaggccctgtgtttcctggtatgattgtgtgtctgtattttgtcattctcttcatctgt
ggtaactacatcctactgaatgttttcttggccattgctgtggacaacttagcaggggca
gatggagatgacaaaaaaaaggaagaaaagaaacagggagagggaggcgagatagaggag
gagaatacagacgctaagattgacttggatgagtatgaggaagaggaggagcaagatgaa
ggagatggtgaagaaggagggactcagctgaatgtggctgattttgctcctccaaaagaa
aaagttgtgccaattccagaaggcagtgctttcttctgcctcagcaagaccaatccaata
agagtaggctgtcatactgtgatcaatcatcacatctttactaacctgatcctggtattc
atcatcctcagtagtatctctctggccgccgaagaccccatcagagcacactccttcaga
aataatgtcctgggctatgctgattatgctttcacctccatattcacagtagaaattctt
ctcaagatgacggtctatggggcgtttttgcataagggctctttctgtaggaactggttt
aatctgttggatcttctggttgtcagtgtgtctttggtttccttcttcctacattcaagt
gctatctccgtagtgaagatcctgagagtgctgcgagtactcagacctctccgagccatc
aacagagccaaaggtctaaagcatgtggtccagtgtgtgttcgtggctatacggaccatt
gggaatattatgattgttactgctctgcttcagttcatgtttgcatgcatcggtgttcaa
ctctttaagggtaaattttatcgctgcacagacgaggcaaagcacacacccgagcagtgc
aaaggcacgttcgtgatctataaagatggtgatgtgaatcaccccttcgtgcggcagcgt
atttggcacaacagtgagtttaactttgacaacgtgctgatgggaatgatggccctgttc
actgtgtccaccttcgaaggctggcctgcgctcctctacaaggctatcgatgccaactca
gagaaccacggccccatctacaactctcatgtggaaatctcagtcttctttattgtttac
atcatcatcattgccttcttcatgatgaacatcttcgtaggtttcgtgatcatcactttc
cgggaacagggagaggcagagtttaagaactgtgagctggacaagaaccagagacaatgt
gtggaatatgctctgaaagcacagccactgaagctgtacatcccaaagaacccagtgcag
cataaattttggttaatgatcaactccacaggatttgagtacatcatgtttgtgttgatt
ctcctcaacacagtcactttggctgttcagcattatgagcagtctaaactcttcagctat
gtcatggacatcctcaacatggtctttacaggcctctttactgtggagatgattgtcaag
ttgttagccctcagactcaagcattattttactgatgcttggaactcctttgatgctctg
attgtggtcgggagtgtggtggacatcgtggtgacagagtttagtagttcagaggacagt
tcccgggtgtcaatcaccttcttccgtctgttccgtgtaatgcgattggttaagctgctt
agcaaaggggagggcattcgcacacttctctggacttttgtgaaatctctccaggccttg
ccttatgtagctctacttattgccatgatcttctttatctacgctgtgattggtatgcag
acatttgggaagattgccttgcaggcctacacgccaatcaaccgtaataataacttccag
acgtttccccaggcagtgttgttgctattcaggtgtgctacaggtgaagcgtggcaggag
atcatgttggcctgtcttccaggaaagcgctgtgatgcagagtcagattttgagcctgga
gaggaattcacatgtggcagcaattttgcaattgtttacttcattagcttcttcatgctc
tgcgctttcttgattattaatttgtttgttgctgtcatcatggacaattttgactacttg
acacgtgattggtcaattctggggccacatcatcttgacgagttcaaaaggatttggtca
gagtatgatccagaagccaagggtcgcataaaacacttggatgtggtggcactgcttagg
aggatccaacctcccctgggatttggaaaactttgtccccaccgtgtggcttgcaagaga
ctggttgctatgaacatgcccctgaactcggatggcacagtgaccttcaatgcaactttg
tttgccctagtcagaactgccctgaagattaaaactgaaggtcacccagaccaggagaat
gtggagctgaggatcattataaagaagatctggaaacgcacaaaacccaaaatccttgat
gaggttattcctcctcctgctgaggaagaggtgactgtggggaagttttatgccacattc
ctaattcaggactacttcagaaagttcagaaagagaaaggagaaagtgggtctgggagac
ccagacccccaaaagccatcagctctacagacaaatacacaacaaaacaaatatacattc
actctgggcaatttatcaatcacagcttctgcgggtctgcgcaccctgcaggatcttggg
ccagagattcgcctggccatgaatggtgaccttgcggatgaagaggaggacctggaggaa
gaacaagaagagaatgcgaatgaaaatggctatgttgtcaacgctgagtcctcagaccgc
cgctcctctgtggtctccacaccgacggcttcatctgctgctgtgtctggagaaggcttt
tccaatggaggcctaagtcacaggaattcactaaccaggacactgaatgacagtggcatc
ctagagcaggataaatttagaagaggagaaaggagacgctcctccctctacctccagcac
aagaatggtgtgattgaccagccatcaaagagagtttcatattacaagcatccacggaga
gggtcagtggatcatttctctggagaggaggggtaccctatggagcagcttttctacagg
agggaagaagccgaggaggtcatagcacccagagacagacttggttacccagatgaagtc
cccattcattctagccatcgagctcatggctatgatggacagcctacctacagtaatcag
tatggcagcagttatggtgaggccagaaggtcagccagaagacgactcttgcctgcaacc
cccactgtccggaagtcatcattcaccatccagtgtctgagaagacagggaagcagtgat
gatcttcccattccaggcacctaccaccagaatttcccaccatgtagagcacgctcacag
gcatatggcagttatgactcacgccgcagcagcagccgttcttccacaggctccacagcc
tcctgggcaaactccagcccccgccgcagtcgtcttctttatgcccccctcatactagtg
gaggacgagaggtcagctggcacaagcagcatgggcctctgggaaaagaaggcagaggat
gatgcaagtgtgcctgtggcagggcgagcgggtcagccttacagggcctacaccaccctg
agggtgcccacacaactcagcccgcactacagcgagaagagaggcagtgctgacagcctg
gtggaggcggtattaatctctgagggccttggcctgtacgcaaaggaccccaagtttgta
gcctttgccaagcgggagattgcagatgcctgtcatatgaccatagacgaaatggagagt
gcagccagtgacctgctaattcgaggcagcacagagagttctgggagcggccttctcaat
catacagacttaacaggtctctacagtgatgaggaacttgtcaggagccatgatgaggat
gagcttgctgatgagatgacatgcgttacctccttctga
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