Tachysurus vachellii: 132855054
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Entry
132855054 CDS
T09596
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132855054
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132855054
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_5
U-box
zf-RING_10
Zn_ribbon_SprT
C5HCH
Motif
Other DBs
NCBI-GeneID:
132855054
NCBI-ProteinID:
XP_060739751
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Position
12:2220438..2224310
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AA seq
617 aa
AA seq
DB search
MCTKSSSSFSLSEGSGEPFLIPEKTKVRVSLSCILSLCEFRKMAEASISVDQFSVDQFIC
PVCLDLLKDPVSLSCGHSFCKVCINDCWDQEDQSGVYSCPQCRDTFTPRPVLRRNNMLAE
VVEKLKKTEVQAASLDHCYAGPGDVECDFCTERKQKAVKYCLMCVASFCETHLKPHLEIP
VLKKHKLFEVSGNLEEKICTKHDKELEIYCHTDQSFICYLCRVDKHRGHDTVTAAEERTE
KQNELQVEQLKSQQRLQEKQKKVQELKQAVNTIKLIAQTEVEDNERIFTELISFMEKKHS
EVTEMIRAQEKAELSRTERLLEQLEQEIDDLQRRITEMEKLSHTHDDIHFLQEIEDLVFG
RRSLPYDRPDFQSDLCEDSSSVTFNQHLSFQRVWKSLFDLKKRLEEICQDEFIKIPEDVE
DVQILLSEPSRDEFLKYFCDLTLDPNTVNHHLVLSEENKAVSSSKTNQQYSDHPERFDYY
SQVLSKESVCGRCYWEVEWSNRRFLLISVSYKDISRKGRGIECWFGGNNQSWSLECSPSS
LFFWHNALKTDLRVPSSPRIGVYVDHSAGTLSFYSVSDTMKLLHRVHTTFTQPLYAGFWF
SRDVLCKSTVRLCDQKQ
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtgtactaaaagctcctcctccttctctctctcagaaggaagtggcgagccattcctc
attccagagaaaacgaaagtcagagtttccctctcatgtattctgtcactgtgtgagttc
agaaaaatggctgaggcgagtatttcagtagatcagttttcagtggatcagttcatctgt
ccagtgtgtctggatctcctgaaggatccggtgagtctctcctgtggtcacagtttctgt
aaggtgtgtattaatgactgctgggatcaggaggatcagagcggagtatatagctgtcct
cagtgcagagacactttcacaccaaggcctgttctacgcagaaacaacatgctggctgaa
gtggtggagaaactgaagaagactgaagttcaagctgcttctcttgatcactgttacgct
ggacctggagatgtggagtgtgatttctgcaccgagaggaaacaaaaagctgtcaagtac
tgtctgatgtgtgtggcttcattttgtgaaactcatctcaaacctcatcttgaaattcct
gttttgaaaaagcacaagttattcgaagtctctggaaatctagaagagaagatctgcact
aaacatgataaagagctggagatctactgtcacactgaccaaagcttcatctgttatctg
tgtagggtggataaacacagaggtcatgacacagtcacagctgcagaagaaagaactgaa
aaacagaatgagctacaggtggagcagctgaaatcccagcagagactccaggagaagcag
aagaaggtgcaggagctgaaacaggctgtgaacactataaagctcattgcacagacagag
gtggaggacaatgagaggatctttactgagctgatcagcttcatggagaaaaagcactcg
gaggtgacggagatgatcagagctcaggagaaggctgaactgagtcgaactgaacgactc
ctggagcaactggagcaggagattgatgatcttcagaggagaatcactgagatggagaag
ctttcacacacacacgatgacatccatttcctccaggaaatcgaggatttagtcttcggt
cgtcgctctcttccatatgatagaccagattttcagtctgatctctgtgaggattcatcc
agcgtcactttcaatcaacatctctcatttcagagagtgtggaaatctctctttgatctg
aaaaagagactcgaggaaatctgtcaggatgaattcatcaaaatccctgaagatgttgag
gacgttcagattttactctcagagccgagcagagacgagtttctaaaatatttctgtgat
ctgactctggatcccaacacagtaaatcatcacctcgttctgtctgaggagaacaaagcg
gtgtcgagcagcaagacaaatcagcaatactctgatcatccagagagatttgactactac
agtcaggttctgagtaaggagagtgtgtgtggacgctgttactgggaggtggagtggagc
aatcggagatttctgttgatatcagtctcatataaagacatcagcaggaaaggtcggggt
attgagtgctggtttggaggcaacaatcagtcctggagtctggaatgttctccttcttct
ctcttcttctggcacaacgccttaaagactgatctcagagttccatcatcccccagaata
ggagtgtatgtggatcacagtgcaggaactctgtccttctacagtgtctctgacaccatg
aagctcctccacagagtccacaccacattcactcagcctctatacgctgggttctggttc
agccgggatgttttgtgtaaatcaactgtgaggttgtgtgatcaaaagcaataa
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