Tachysurus vachellii: 132855694
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Entry
132855694 CDS
T09596
Symbol
samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog A
KO
K07277
outer membrane protein insertion porin family
Organism
tvc
Tachysurus vachellii
Pathway
tvc04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132855694 (samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tvc03029
]
132855694 (samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvc02000
]
132855694 (samm50)
Mitochondrial biogenesis [BR:
tvc03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
132855694 (samm50)
Transporters [BR:
tvc02000
]
Other transporters
Pores ion channels [TC:
1
]
132855694 (samm50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
Motif
Other DBs
NCBI-GeneID:
132855694
NCBI-ProteinID:
XP_060740843
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All DBs
Position
13:5659820..5666735
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AA seq
469 aa
AA seq
DB search
MGTVHARSLDPLPMQGPELGVQADDLDIGEAEYEPQQEVLENKDVVVQHVHIDGLGRTKE
DILTYEIADVFRAKNLIDVMRKSHDARHKLLRLGIFRHVEVVIDTSHGEDALPNGLDVTF
EVKEFRRLTGSYNTMVGNNEGSMVLGLKLPNVFGRAEKLTFQFSYGTKETSYGLSFFKPQ
AGHFERNFSVNIYKVTGQFPWSSLRETDRGISTEFSFPIWKTNHTLKWEGVWRELGCLAR
TASFAVREESGHSLKSSLSHSMFIDTRNSPILPKKGALLKINQELAGYTGGDASFLKEDF
EIQLNKRLFWDSVLSASLWGGLLLPFGDNPTSIADRFYLGGPTSVRGFSMYSIGPQSEGD
YLGGEMYWAGGLHLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGEGPRAHLSRLAE
CIRWSYGAGILLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtacatgcaagaagtttggaccctcttccgatgcaagggccggagctgggg
gttcaagcagatgacctggacattggagaagcagagtacgagcctcagcaggaagttctg
gaaaacaaagacgttgtggttcagcatgtacatatagacgggcttggaaggaccaaggag
gatatcctaacatatgagattgcagatgtcttcagagccaagaacttgattgatgtgatg
aggaagagccacgatgcccgacacaaactgctgcgcctgggaatattcagacatgtggag
gtcgtcattgatacttcacacggtgaggacgcactgcctaatggactggacgtcacgttc
gaggtgaaggagttcagaagactgactggaagctataacactatggtgggaaacaatgag
ggaagcatggtgctaggtttgaaactgcctaatgtttttggccgtgccgagaagctgact
tttcagttctcctacggcactaaggaaacatcctatggcctctctttcttcaagcctcaa
gccggacactttgaacgcaatttttctgtcaatatctacaaagtcacagggcagttcccg
tggagttcactgagagagactgacagaggaatctccacagagttcagttttcctatctgg
aagacgaaccacacgctgaagtgggagggagtgtggagagagctcggctgtctggctcgc
actgcctccttcgccgtcagagaggaaagcggtcactccctcaagtcctcactctcacat
tcaatgtttattgacacacgcaactcccccatcctacctaagaaaggtgccttactaaag
atcaaccaggagttggcaggttacactggaggagatgccagtttcctgaaggaggatttt
gaaattcagctcaataaacgactcttctgggattcggtcctctcagcctctctatggggg
ggtctgctgctccccttcggagacaatcccacttcaatagctgacaggttttatctcgga
ggcccaaccagcgtgcgaggttttagcatgtacagcatcggaccgcagagcgaaggtgat
tatcttggtggggagatgtactgggctggtggactccatctgtacactcctctgccattc
aggccaggtcgtggcggattcggggaccttttccgaacacacttctttctcaatgccgga
aacttgtgcaacctcaattacggcgaagggcctcgagcgcacctgagccgactggccgag
tgtatccgctggtcatacggagcgggcatcctgctgcgcctggggaacatcgcacgactt
gagctcaattactgcattcccatgggagtccagagcggagacaggatatgtgacggagtg
cagtttggagcaggcattagattcctgtaa
DBGET
integrated database retrieval system
