Tachysurus vachellii: 132862339
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Entry
132862339 CDS
T09596
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132862339 (tfip11)
Spliceosome [BR:
tvc03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
132862339 (tfip11)
Other components
Complex C specific factors
132862339 (tfip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
132862339
NCBI-ProteinID:
XP_060750298
LinkDB
All DBs
Position
19:10952437..10959481
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AA seq
835 aa
AA seq
DB search
MSMSHLYGRRGDEEEEDGVEIEKFEISEWDLANEFNPDRRRHRQTKEEATYGIWAEHDSD
DERPSFGGKRAKDYTAPVNFISAGVRKTAAEEKNEQQGSDDSEEDEEAPPPPRAAAPRKL
QTGGNFKTSQKTFAGNIRPGQDIGSWEKHTRGIGQKLLQKMGYVPGKGLGKNAQGIVSPI
EAKVRKGKGAVGAYGNERTQQSVQDFPVVDSEEEEEKEFQRELGQWRKEPGAGKKRPKYS
FKSVEELKAHGKLSNKSMSQPAGELAQVKVIDMTGREQKVYYSYSQMSQKHSIPEEAPMS
ASAREQKSSGFALPELEHNLKLLIELTEQDILQSSRRLQHEKDTVVSLRHESTALQARLR
EESEAVERLEQVLELVERLETGGEGGSPSLSLEECVQAFQQMQTQFYHEYKSMGLADLAV
SAVHPLLNEKLRNWDPLKDCSYCFEEVGQWRAILEGTQLQHSTPDANYMDPYHRLIWEVW
IPVLSNCVTQWQPRNVGPMVDLVDCWAPVLPLWILDYVLEQLIFPRLQKEVDNWNPLTDT
VPIHSWIHPWLPQMQMRLEPLYPPIRNKLANALQRWHPSDASARLILQPWKEVFTPGAWE
AFMVKNIVPKLALCLGELVVNPHQQLIEPFNWVMDWEGMLSLSSMVGLLDKHFFNKWLQV
LCSWLSNNPNYEEITKWYLGWKGMLSEQLLSHPVIKEKLNEALDIMNRAVASGLGGYMQP
GAKENIAYLTQTERRKDFQYEPPAPPQREVESNVPRLPVTGPVSASIPTNFKDLIQAKAE
ENGIVFMPIMGKRHLGKQLYTFGRITIYVERGVVFVQGKKTWVPTSLQSLIDMAK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtctcatctgtatgggcgtagaggagacgaagaggaggaggatggagtcgag
attgagaagtttgagatttctgaatgggatttagccaacgagtttaatcccgacagacgt
cgtcacaggcagaccaaagaggaggctacatacggcatatgggctgaacacgactcagat
gatgagagaccgagctttggaggcaagagagcaaaagactacacagcccctgtgaacttc
ataagtgccggtgtgaggaagactgcagctgaggagaaaaacgagcagcagggctcagat
gactcagaagaggatgaagaagcacctccaccaccccgtgccgctgcacccagaaagctt
caaaccggtgggaattttaaaacttcccagaagacctttgcaggcaacatccgaccaggg
caggacatcggtagctgggagaaacacacacgaggcattggccagaagctcctacagaag
atgggctatgtcccgggcaaaggccttggaaaaaatgcacagggtatcgtaagcccaatc
gaggctaaagtacgtaagggaaaaggagctgtgggtgcttacgggaatgaaagaactcag
cagtcagttcaggactttccagtggtagactcagaggaggaggaggagaaggagtttcag
agggagttgggtcaatggcggaaagagcctggagcaggaaagaaaaggccaaaatactcc
ttcaaatctgtggaggaactgaaagctcatggaaaactctctaacaaaagcatgagccaa
ccagctggagaacttgcccaagtcaaggtgatagatatgacaggccgtgagcagaaggtc
tactacagctacagtcagatgagccagaagcacagcattcctgaagaggctcctatgagt
gcaagtgcaagagagcagaagagctctggttttgctctgccagaactcgaacacaacctc
aaactgctcatcgagcttactgagcaggatattttacagagctctcggcgtttgcagcat
gagaaggatacagtggtgtctctgaggcatgagagcactgccctgcaggctcggttaagg
gaggagagtgaggcagtagagcgactggagcaggtgctggagctggtggagcgactggag
acaggtggggaaggaggcagcccttcactctcccttgaagagtgtgtccaggctttccag
cagatgcagacacagttctatcatgaatacaaaagcatggggctcgccgatctcgctgtg
tccgcggtgcatccactactgaatgagaaactccgaaactgggacccactgaaggactgt
tcatattgttttgaggaggtaggtcagtggagggccattctagaggggacacaacttcaa
catagtacacctgatgccaactatatggacccctaccacaggttgatatgggaggtgtgg
attccagtgctaagcaactgcgtgacacagtggcagcccagaaatgttggtcctatggtg
gacctggtggattgttgggcccctgtgctgcctctgtggatcctcgactacgtattggag
cagctcatcttcccacgacttcagaaagaggtggataactggaacccactgacagacaca
gttcccatccactcctggatccatccgtggttgcctcagatgcagatgcgcctagagcca
ctgtacccacctatacgcaacaagctggcaaatgccctgcagcgctggcaccccagtgat
gcttctgcccgactcatcctgcagccttggaaagaagtcttcacccctggagcctgggaa
gccttcatggtcaaaaacatcgtccctaaacttgctctgtgtcttggggagttggtggtg
aacccacatcaacagctgattgaaccgttcaactgggtgatggactgggagggaatgttg
tctttgtccagtatggtgggattacttgacaagcacttttttaacaaatggctacaggtg
ttgtgctcctggctgagtaacaatcctaactatgaggagatcactaagtggtatctgggc
tggaaaggcatgctgtcagagcaactgcttagtcaccctgtcattaaagagaagctgaat
gaagccctagacataatgaacagagctgtggcctcgggactaggtggttacatgcagcct
ggagcaaaggaaaacattgcatatctgacccagacagagaggaggaaagatttccagtat
gagccaccagcacctccacagcgtgaggtagagagcaatgttccacgcctgcctgtcact
ggccctgtctcagcctccatacccaccaacttcaaagacctgatccaggccaaagcagag
gagaacggcattgtcttcatgcctattatgggcaagagacacctgggaaagcaactgtac
acgtttggcaggatcactatctatgtggagaggggtgttgtgtttgtccaggggaaaaag
acctgggtccctacatcactacagagtcttattgatatggccaaataa
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