KEGG   Trichophyton verrucosum: TRV_05356
Entry
TRV_05356         CDS       T01615                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
tve  Trichophyton verrucosum
Pathway
tve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRV_05356
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tve03041]
    TRV_05356
   03036 Chromosome and associated proteins [BR:tve03036]
    TRV_05356
Spliceosome [BR:tve03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    TRV_05356
 Complex B
    TRV_05356
 Complex C
   U2 SnRNP specific factors
    TRV_05356
Chromosome and associated proteins [BR:tve03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    TRV_05356
SSDB
Motif
Pfam: SF3b1 HEAT_EZ Htt_N-HEAT_1 UTP20_C DUF3385 XMAP215_CLASP_TOG UNC45-central
Other DBs
NCBI-GeneID: 9577248
NCBI-ProteinID: XP_003020547
UniProt: D4DDZ2
LinkDB
AA seq 1222 aa
MADAEIESIKRLQAERNGKKGSKTFDMSNQRTDVSTKASLTESFDTTLYDRADADKYAGY
NTSIAVDGEDEDMADDDGQNGHRLVGQYTATSDQMKEFATGKGVEEEDILLAREKTSRIS
ERETDYQKRRFDRALSPTRADPFAADGQGNGETEGASYRDIMALRELEKEEERVKKLIKD
KQASEGANGSVEHEATLKLEEAGGDKDNDESAAAPTRKRKKRWDVSSEETAKPNEPESSE
VKPKRSRWDQTPAPGGQPEAPKRRSRWDQAPTLTAATPVGNQGLATPVPQASGPVTVPTF
GSDISARNAPLSDEELDMMLPSEGYKILEPPPGYAPIRTPARKLMATPAPMQSASGIGGF
MMQEPESARSMGKQLPTEIPGVGDLQFFKAEDMTYFGKLVDGADENSMSVEELKERKIMR
LLLKVKNGTPPMRKTALRQLTDNARQFGAGPLFNQILPLLMEKSLEDQERHLLVKVIDRI
LYKLDDLVRPYVHKILVVIEPLLIDQDYYARVEGREIISNLSKAAGLAHMISTMRPDIDH
VDEYVRNTTARAFAVVASALGIPALLPFLRAVCRSKKSWQARHTGVKIVQQIPILMGCAI
LPHLQGLVDCIGDNLSDEQAKVRTVTSLAIAALAEAANPYGIESFQDILGPLWMGARKQR
GKGLAGFLKAVGYIIPLMDEEGANYFTSQIMEIVLREFSSPDEEMKKVVLKVVSQCAGTD
GVTAVYLKEHVLQDFFKSFWVRRMALDKRNYRQVVETTVDLGQKVGAGEILERIVNNLKD
ESEAYRKMTIETVEKVIASLGAADVGERLEERLIDGVLFAFQEQSVEDIVILNGFGTVVN
ALGSRCKPYLPQIVSTILWRLNNKSATVRQQAADLISRIAMVMKQCGEDALMGKLGTFLY
EYLGEEYPEVLGSILGALRSIVTVVGINQMQPPIRDLLPRLTPILRNRHEKVQENTIDLV
GRIADRGPESVNAREWMRICFELLDMLKAHKKGIRRAANNTFGFIAKAIGPQDVLATLLN
NLRVQERQSRVCTAVAIGIVAETCAPFTVLPALMNEYRVPELNVQNGVLKAMSFLFEYIG
EMAKDYVYAVTPLLEDALIDRDQVHRQTAASVVKHIALGVVGLGCEDAMVHLLNLLYPNL
FETSPHVIDRIIEAIEAIRMAVGTGIVMNYVWAGLFHPARKVRTPYWRLYNDAYVQGADS
MIPYYPTIEEDGLGRCELGIIL
NT seq 3669 nt   +upstreamnt  +downstreamnt
atggccgacgcagagatcgagtccatcaaacgtctccaggcggagcggaatggcaaaaaa
ggttcaaaaacctttgacatgtcaaaccagcgcactgacgtatcgaccaaggcatctctc
accgaaagcttcgatactaccttatacgatcgtgcggacgccgataaatatgcagggtat
aatacgtctattgctgtagatggtgaagatgaggacatggctgatgatgatggccaaaat
ggtcatcggctggtggggcaatatactgcgacctctgaccagatgaaggagtttgctact
gggaagggggtcgaggaagaagatatactcctggcacgcgagaaaacatccaggatttca
gagagggaaactgattaccagaagcgacgctttgatcgagccctttcacccacacgagca
gatccttttgcagcagatggccagggaaatggagagacggagggcgcaagctatcgagat
atcatggcacttcgggaactcgagaaagaagaagaacgcgttaagaagttaattaaagat
aagcaggccagtgaaggtgctaatggatcagtcgagcatgaagctaccctgaagctggag
gaagcaggcggcgataaggataatgacgagtccgccgcggccccaacaaggaagaggaag
aagagatgggatgtatcttcggaagaaactgccaagcccaatgagcctgaatcctctgaa
gtaaagcccaagcggtcgaggtgggatcagactcctgcacctggaggccagccggaggca
cccaagcgtagatccaggtgggatcaagcgccaactctcacagcagcaacaccagtcggg
aatcagggccttgcaactcctgtacctcaggcttctgggcctgttactgttcctaccttt
ggatctgatatatctgctcgcaatgcgccactatccgatgaggaactagatatgatgctc
ccctcagagggatataaaattttggaaccaccgcctggatacgccccgattcgaaccccc
gcccgtaaactaatggctacacctgctcccatgcaaagcgccagcggcataggaggattc
atgatgcaagagcctgaaagtgcgcgctcgatgggaaagcaacttccaaccgagatccca
ggtgttggtgacttgcagttttttaaggctgaggatatgacatacttcggaaagcttgtg
gatggcgcagatgagaattccatgtccgttgaggagctaaaagaaagaaaaataatgagg
ctattactaaaagtcaagaacggaacacctccaatgcgaaagacggcgttgcgtcagctc
actgataatgcaaggcagtttggagctggaccactttttaaccaaattctgccactactc
atggagaaatccctcgaggaccaggagcggcatttacttgtgaaggtcattgatcgcatc
ctttacaaactagatgaccttgttcgaccttacgtacataaaattttggtcgtcatcgaa
cccctgctcattgaccaggattactatgctcgagtggaaggccgtgaaattatctctaac
ctaagcaaagcagctggtcttgcacatatgattagtaccatgcgtccggatattgaccac
gttgatgaatatgtacgaaataccaccgccagagcttttgccgttgtcgcttctgccctt
ggtatacccgcgcttcttccattcctcagagctgtttgccgaagcaagaaatcctggcag
gccaggcacactggtgttaagattgtgcagcaaattcccatccttatggggtgtgctatc
ttacctcatctccaaggcctggtcgactgcattggtgacaacctcagtgatgaacaagct
aaggtacggacagtaactagcttagctatagccgcccttgccgaagctgccaatccatat
ggtatcgaaagtttccaggacatccttggcccactctggatgggggcaaggaaacagcga
ggcaaaggtctggctgggttccttaaggctgtgggctatattatccctctgatggatgag
gagggtgcaaattacttcaccagccaaattatggaaattgttctccgagagttttcgtcg
ccagatgaagagatgaaaaaggtggtcttgaaagttgtttcgcaatgtgcaggcacagat
ggcgttacagcggtttaccttaaagaacacgtactccaagacttcttcaaaagtttctgg
gttcgacgcatggctctagataagagaaactaccgacaggtggtagagacaacagtggac
ctaggccagaaagttggcgccggtgaaattcttgaaaggattgtcaataatctcaaggat
gagagtgaggcataccgtaagatgacgatcgaaacggtagagaaagttattgcctccctt
ggtgccgcagacgttggagagaggctcgaagaaagattgatagatggagttttgttcgca
tttcaagaacagagcgtcgaggatatagtgatccttaacgggtttggaactgttgtcaac
gctcttggttctcgttgcaagccatatttgcctcagattgtgagtacaattctgtggcga
ctaaataacaagtctgccactgtacgacagcaggcagcagacctcatctcacggatcgca
atggttatgaaacagtgtggtgaagacgctctaatgggaaagctgggaactttcctttac
gaatatctcggcgaggaatatccggaggttcttggttctatactaggcgcattacgttct
atcgtcacggttgttggtatcaaccaaatgcaaccacccattcgggacttacttcctcgt
ctcaccccaattctacgaaatcgtcatgagaaagtgcaggaaaacaccatagatctcgtt
ggtcgtattgctgatcgtggaccagaatccgttaatgcgcgagaatggatgcgaatttgc
ttcgagctgcttgacatgttgaaagctcacaaaaagggcattcgacgagcagctaacaat
accttcggtttcattgctaaggctattgggccgcaagacgtccttgccactcttcttaac
aacttgcgtgtccaggaacgtcagtctcgtgtctgtaccgcagttgcaattggtatagtc
gctgagacatgtgccccatttacggttcttccggctcttatgaatgaatatcgcgtcccc
gagttaaatgtgcaaaacggcgtgctcaaagccatgtctttcctctttgagtatatcggt
gagatggctaaagactatgtttacgctgtcactccgcttctggaagacgctttgattgat
cgagaccaggtccaccgtcaaactgcggcaagcgtagtaaagcatattgctttgggcgtg
gttggacttggatgcgaagacgcaatggtccatctgcttaaccttctgtaccctaaccta
ttcgaaaccagtccccacgttattgacagaatcatcgaagctattgaggctattcggatg
gctgtcggaacaggtatcgtcatgaattatgtttgggccggcctgttccatccagcacga
aaagtacggactccttactggagactgtacaacgatgcatatgttcaaggcgcagactcg
atgattccttactatcctacaattgaagaggatgggctaggaaggtgtgaattaggcatt
atcttgtaa

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