Trametes versicolor: TRAVEDRAFT_112523
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Entry
TRAVEDRAFT_112523 CDS
T04795
Name
(RefSeq) prokaryotic type I DNA topoisomerase
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tvs
Trametes versicolor
Pathway
tvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TRAVEDRAFT_112523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvs03032
]
TRAVEDRAFT_112523
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_112523
Enzymes [BR:
tvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TRAVEDRAFT_112523
DNA replication proteins [BR:
tvs03032
]
Eukaryotic type
DNA Topoisomerases
TRAVEDRAFT_112523
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
TRAVEDRAFT_112523
FA (Fanconi anemia) pathway
TRAVEDRAFT_112523
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
zf-GRF
Toprim
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
19407061
NCBI-ProteinID:
XP_008034473
JGI:
112523
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MRVLCVAEKPSISKSITQILSGGQFTTRNSRNKYIKNYDFNYPQTNSFYTVTSVTGHVME
HDFNIMYSKWTSCDPFALFEAPVECRVKKDADTIAENLKTEARRAQLLMIWTDCDREGEN
IGAEIMKICRKANANITVRRARFSAIIAQQIHHAAQNPVQLDMAQANAVETRILLDLRIG
SAFTRLQTLNLQNRHEALKRELISYGPCQFPTLGFVVARYNKLKNFKPEPFWYIYLSLTR
PSATDSDGEETVFTWRRGHIFDVNNAMALYDAALAHAMARVSKVTVKDTKKWKPLPLTTV
DLQKAGSRLLKISPKRVLDIAESLYQRGFLSYPRTETDVYDPQFDFMTLIGKQTADPAWG
GFAGGLQNGGFNAPRKGKHDDHAHPPIHPTAHAGNLAGDEKRVYEYITRRFLASCSKDAT
GWLTTIDVQYGEEEFYATGLVIRERNYLDVFPYDKWADKEVPNFQEGEAFVPTECRLDEG
QTSKPTLLTEADLVSLMDEHGIGTDATIAQHIQTIIDRGYVIERMQGATKYLVPSTLGIG
LVEGYDAIGFDHSLSKPELRRETEMRMVDICGGVKSKNEVLAESIERYKEMFMRTKIEFE
KLVAAVGHRINGQGPVPEVDLGEAHEDDDEDGGGGPGGGGGGRGRGRGGGRGRGAGGATR
GTRGAGTRGASSTRARRGRGRGGSAAANGPPPSPPPPPPPPPPPARRQAPAALADDEDEH
YWSDDPIPPPSPPPPVRHPPARPAPARPAPAPAPARPVPPRSGHSLSASALPQCDCNIPA
VERTVTKESANKGKRFWTCGQNQTCQFFQWSDGPSASGTPTAAASSSSSRAYPSSTAYSS
ASAVVPAKRPHSAVGAERRCGCDLTAVLKVSQSASNANRKYWSCPNGSRQARCAYFEWAA
DDEDGPIEPPKRTFSSNAGNAPNGGGGGGAGGSSGSGCYKCGEEGHWASGTSVFERRAIL
N
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcctttgtgttgcggagaaaccgtccatctcgaagtctatcactcagatattg
tcgggtggccagttcacgacgaggaacagtcggaacaaatatatcaagaattatgacttc
aactatccccagacgaattcgttctacaccgtaacgtcggtcaccggccatgttatggag
catgactttaacatcatgtactctaaatggacctcatgcgacccattcgctctcttcgaa
gccccggtcgagtgcagggtcaagaaggatgccgacactatagccgagaacctcaagacc
gaagcaagacgcgcgcaactcctcatgatttggacggactgcgatcgtgagggcgagaat
attggcgcggaaatcatgaagatctgccggaaagcgaatgccaacatcacggtcaggcgt
gctaggttcagcgccatcattgcccagcaaattcaccatgccgcccagaacccggtgcaa
cttgacatggctcaagccaatgcagtagagacgcgcattttgctggaccttaggataggc
tccgcatttacccgtctccaaacgctcaatttgcaaaaccgtcacgaggccttgaaacga
gagctgatatcgtacggtccgtgtcaattccccacccttgggtttgtcgtcgcccggtac
aacaaactcaagaacttcaaacctgagccgttctggtatatctatttgtcgctaacccgt
ccgtctgcaaccgattcggatggcgaggagaccgtctttacgtggaggagagggcacata
ttcgacgtcaataatgcgatggccctgtatgatgcggcactcgcccacgctatggctcga
gtttcgaaagtgaccgtgaaggataccaagaagtggaagccgctcccgttgaccacggta
gacttgcagaaggcgggttcgcgcttgctgaagatctcgcccaaacgggtgctcgacatc
gcagagagcttgtaccagagaggatttttgtcttatccgcgcactgagactgacgtatat
gacccccaattcgacttcatgaccttgataggaaagcaaaccgcagaccccgcatggggt
ggatttgctggtggcttgcagaatggaggcttcaatgctccgaggaagggcaaacacgat
gatcacgcgcatcccccaattcatcccaccgcgcatgcagggaatctcgctggggacgaa
aagagggtgtacgagtacatcacgcgtcgcttcctcgcgagctgttccaaggatgcgaca
ggttggttgacaacaatagacgtgcaatacggcgaggaggagttctacgccaccggactc
gttatccgagagcggaactacctggacgtcttcccgtacgacaaatgggcggacaaggaa
gtgccaaacttccaagagggggaggccttcgttccgacggagtgtaggcttgacgaaggc
caaacgtccaaaccgactcttctcacagaagcagatctagtcagtctcatggacgagcat
ggcattggaacggacgccacgatcgcccaacacatacaaacgatcatcgaccgcgggtat
gttatcgagcggatgcaaggcgctaccaagtatcttgtcccgtcaacactcggcataggg
ctcgtagagggctacgatgctattggcttcgaccatagtctgagcaagccggagctccga
cgcgagaccgagatgcgcatggttgatatatgcggaggcgtcaagtcgaagaacgaggtg
ctcgcagaaagcattgagcgctacaaggagatgttcatgcggaccaagatcgagttcgag
aagctcgtcgcagctgtcggacatcgtattaatggacaaggccctgtaccagaggtggac
cttggggaagctcatgaagatgatgacgaagacggcggtgggggccctgggggcgggggc
ggtggcagaggaaggggccgaggcgggggccgcggtcgtggtgcaggaggtgcaacgcgt
ggaacaagaggagcgggtaccagaggcgcgagctcgacacgagctcggcgcggccgcggc
cgtggaggctccgcggcagccaacgggccaccaccttcaccaccaccacccccacctcct
cctcctccgccggcgcgcagacaagccccggccgcgcttgccgatgatgaggatgagcac
tactggagcgacgacccgatcccacctccatcgcctccgccaccagttcgtcatccacca
gctcgtcctgcgccggctcgcccggcaccagcaccggcaccagctcgtcccgtgccccca
aggagcggacattcgctatcggcatctgcgctgccacaatgcgactgcaacatacccgct
gtagaacgcaccgtcacgaaagaatccgccaacaagggcaagcggttctggacatgcggg
cagaaccaaacatgccagttcttccagtggtccgacgggccttctgccagcggtacccca
accgccgccgcgtcctcgtcatcttcacgcgcctatccctcgagtacggcgtactcatcg
gcatcggctgtggtccctgcaaagcgcccgcatagtgctgtgggggccgagcgacgctgc
gggtgcgatctgaccgctgtcttgaaggtgtcgcagtcggcgtccaacgcgaaccgcaag
tactggtcgtgccccaatgggtcgcgccaggctaggtgcgcgtacttcgaatgggcagcg
gatgacgaggatggccccatcgagccgccgaagaggacgttctcgagtaatgctgggaac
gcgccaaatggcggtggaggcggtggggccggcgggtcatctggtagtgggtgttataaa
tgtggcgaagaggggcattgggcaagcggtacgtctgttttcgaacgtcgagcgatattg
aactga
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integrated database retrieval system
