Trametes versicolor: TRAVEDRAFT_134364
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Entry
TRAVEDRAFT_134364 CDS
T04795
Name
(RefSeq) WD40 repeat-like protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
tvs
Trametes versicolor
Pathway
tvs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
TRAVEDRAFT_134364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvs04121
]
TRAVEDRAFT_134364
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_134364
Ubiquitin system [BR:
tvs04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
TRAVEDRAFT_134364
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
TRAVEDRAFT_134364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
F-box-like
ANAPC4_WD40
F-box
NBCH_WD40
Nup160
WDR54
PQQ_2
Oxidored-like
Motif
Other DBs
NCBI-GeneID:
19408746
NCBI-ProteinID:
XP_008043730
JGI:
134364
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MEDVDGAFASVPRSFTVTRPPSPTPSFRTETFSIVNWNPELYNLMLPNADGTPRCSMGFL
PSGRRTVAGYPSAHWIPHNASSPSPMKPSRSLTMGMGILPRIWDALREGSPVKKGRRRPG
LPAWRDAGTDLEYHSDGSVDYANLLPLDGEEGELIDDEACFIDVRAITGMDMISHLPLEL
SLELLSYLDLPSILACLRVSRTWNHLARDNSIWRVLFSLKEKDGWRVDLRRAIRPGSSAQ
SAMPLSASRAMIPAPLEIKWYELYRTRTELDRRWSNYPGAGLSADLSDDAVAEDKEVTKA
WEPKVMRISGHSDSVYCLEFDSSRIVTGSRDRTIKVWSLKTGRCLATFSGHRGSVLCLKF
DRDWDIGDNVRGANGMEVDDPLAPRKGFLVSGSSDCSVCVWDLYAHPQENGESEITAEVK
AVLRGHSGGVLDLRIDAKWIVSCSKDALIRVWDRETLELRSTLRGHEGPVNAVGLQGNRV
VSASGDGKMILWDVASGERLRTFEGHDRGLACIEFKDDLIVSGSNDCKIKVWDANTGTCL
RTLVGHDYLVRALAFDPRSGRLVSGSYDKTVKVWDLHSGKLVREFRGCHVSHIFDVKFDH
CRIVSTSHDRKIVVLDFSEGLDTSLFV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtcgacggtgcgttcgcctccgtgccgcgctctttcaccgtcacccgccca
ccgtcgccgaccccgagcttccgcacggagacgttctccatcgtgaactggaacccggag
ctatataacctcatgctccccaacgcggatggtaccccgcgctgctcgatgggcttccta
ccttcaggccgccgcaccgtcgcgggctacccgagcgctcactggatcccacataacgca
tcatcgccgtccccgatgaagccctcccgcagtctaacaatggggatgggcatcttgccc
cggatatgggatgctctccgtgagggctccccggtgaagaagggacgtcgtcggccgggg
ctgcctgcgtggcgcgacgcggggacggatctcgaataccactcggatggctcggttgat
tacgcgaacctgctgccactggacggcgaggagggcgagctcatagacgacgaagcgtgc
ttcattgacgtcagagctatcactggcatggacatgatatcacatttgccactcgagctt
tcattggagttgcttagctacctcgacctgccatctatcctagcttgcctgcgtgtttca
agaacatggaaccaccttgcccgcgataactccatatggcgcgtcctcttctcactgaaa
gagaaagacgggtggcgcgtggacctccgccgagcgattcggcctggttcttcggcgcag
tcggccatgccgttgtccgcctcgcgggcgatgatacctgctccattggagatcaagtgg
tatgagctctaccgcacgcggaccgagctcgatcgccgctggtcgaattatcctggcgca
gggctgagcgcagacctgagcgacgatgctgttgcggaggataaagaggtgacgaaggct
tgggagcccaaggtcatgcgcatcagtgggcacagtgacagtgtctattgcctcgagttc
gactcgtcgcgtatagtcactgggtcgcgcgaccgcaccatcaaggtgtggagtctgaag
acggggaggtgcctcgcaacatttagcggacaccgcgggagcgtgctctgtctgaagttc
gaccgcgattgggacattggagacaatgtgcgcggggcaaacgggatggaggtcgacgac
ccgttggcgccaagaaaggggttcctcgtcagcggctccagtgactgctccgtatgcgta
tgggacctgtacgcccacccgcaggagaacggagagtctgagatcaccgcggaggtgaag
gcggtgctcagaggccacagtggcggagtgctcgacctccgaatcgatgccaagtggatc
gtcagttgctcgaaggacgcgcttattcgagtctgggatcgtgagacccttgagctgcgt
tctactttgcgcggacacgagggccccgtgaacgccgtcggcttgcagggtaaccgtgtc
gtcagtgccagcggggacggcaaaatgatcctgtgggacgttgccagcggcgagcggtta
cggacatttgagggtcacgaccgcggtctcgcgtgcattgagttcaaggatgacctcatc
gtatccggctccaacgactgcaagatcaaagtctgggacgccaacaccggcacatgtctt
cgcacactcgtcgggcacgactacctggtccgcgctcttgccttcgacccgcgcagtggg
cggctcgtgagcgggagttacgacaagacggtcaaggtgtgggatctgcattcggggaaa
ctcgtgcgcgagttccgcggatgtcatgtgagccacatcttcgacgtcaagttcgaccat
tgtcggattgtcagcacatcgcatgataggaagatcgtcgtgctcgacttttccgagggg
ctcgacacgagcctattcgtctaa
DBGET
integrated database retrieval system
