Trametes versicolor: TRAVEDRAFT_145446
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Entry
TRAVEDRAFT_145446 CDS
T04795
Name
(RefSeq) WD40 repeat-like protein
KO
K03361
F-box and WD-40 domain protein CDC4
Organism
tvs
Trametes versicolor
Pathway
tvs04111
Cell cycle - yeast
tvs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
TRAVEDRAFT_145446
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
TRAVEDRAFT_145446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvs04121
]
TRAVEDRAFT_145446
Ubiquitin system [BR:
tvs04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
TRAVEDRAFT_145446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
F-box-like
F-box
NBCH_WD40
Nup160
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
19409449
NCBI-ProteinID:
XP_008036646
JGI:
145446
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MTSNPRPSLYLAPSVNTTTVVTTTTTTTTYAPIQLPPIPPPSSPKDPKLYPLLNATLPRS
LREFPLVFPGGSRATFHDGELGEQEMQEEESVVEGQGWKMIKRDESEPRKEVGLAEAIER
YGRKRSYSNENMMEGIEAIPGLVTNTPPRKKAKSHPPPINTINNAAPPSPLPSPHGSPPP
ESIWPSAPPSGHSSPQPQAQAPVQPDLSLTTLLALPSLLSHFSSLPPSLQSHVLLTFLRH
SPLSVLRTLHSVLTPTLARDFLTLLPPELVSLILSFLPFPDLARASRVSKSWRAIIDSDP
VLWRDLLKGTRIWFGHDSETAFSDAIMARRRRQGIPASNSLPLPHPYKILFKSRHLTRSR
WVTNQEPKRLTFPAHGRSVVTCLIFSHGRIISASDDHSIHVYSPVTGTLIRSLDGHDGGV
WALAATKNTLVSGSTDRTVRIWDLETGRCTHVFGGHTSTVRCLAIVKPEMIDYENEHGIM
VREKWPKRPLIVTGSRDHSLRVWTLPRPGDEEYRCYGADDTEVDPSEEDVDDNPYHKLHL
EGHDHAVRALAARGRTLVSGSYDCTVRIWDIITGDCKWVLVGHTQKVYSVVLDINRNLAC
SGSMDGTVRVWNLSTGQCQHILAGHTSLVGLLGLSPSYLVSAAADSTLRVWDPDSGELRH
TLAAHSGAITCFQHDEFKVLSGSDGTLKMWDIRDGTQVRDLLTGIVGVWQVVFEGRWCVA
ASNRMDSTVLDVWDFGNDEDEDWEGEPPGGLYDEESDYDEEEEEDLDRTQAEVDAMDQDL
DGVLSDAEFADADQDQELGTTDDDDHEGRPAAWRGLSLSTDADDSTKGSTSRETSASHYR
SRSSARTRSQREAPSSAGPSEPQLRMLPTLEETPTRPRTRNAGHRRRWQP
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaaccctcgtccttcgctctacctcgcaccgtctgtgaacactacgacagtg
gtcacgacgacgacgacgactactacatacgcgcccatccagctccctccaatacctcca
ccgtcttcgcccaaggacccgaagctatacccgttgctcaatgcgactctaccaagatca
ttgcgagagtttcccttggtcttccctggaggttcgcgtgccactttccacgacggcgaa
ctcggtgaacaagagatgcaggaggaggaatcggtggtggagggtcagggttggaagatg
atcaaacgcgacgagagcgagccgaggaaagaggttggtcttgcggaggccatcgaacgc
tacggccgcaagaggtcgtacagtaacgagaacatgatggagggtatcgaggccatcccg
ggtctggtcacgaatacaccaccgcgaaagaaggcgaagagtcatccaccgcccatcaac
acgataaataacgccgcgccgccttcccccctcccttccccacacggatccccaccaccc
gagagcatctggccttcggcaccccccagcggccattcctcaccccagccccaagcacaa
gcacctgtacaacccgacctatctctcacgacactactcgctctcccgtcgctgctttcg
cacttctcaagtctaccgccatcacttcaatctcacgtgctacttacgttcctgcgtcac
tctccgctgtctgtactgcgcactctccactccgttcttactcccacactcgcaagagac
ttcctcaccctcctaccacctgagcttgtgtccttgatcctgagcttcctgcccttcccc
gacctcgctcgtgcatcccgggtctccaaatcgtggcgggcaatcatcgattctgatcct
gtcctttggcgagaccttctgaagggtactaggatttggtttgggcacgactccgaaaca
gcattctcagacgcaatcatggcgcggcggaggcgacaaggtattcccgcatccaattca
cttccactccctcatccgtataagatcctgttcaaatcgcgacacctcacacgctcgcga
tgggtcaccaaccaggaaccgaagcgactgacgttccctgcacacggacggtcagttgtg
acctgcctcatcttctcacatggtcgcatcatatctgcttcggacgaccactcgatccac
gtctactcccctgtgaccggtacgctcattcgctctttggatggccacgacggcggcgtg
tgggcgctcgcggcaaccaagaacactcttgtcagcggctccacggaccggacggtccgg
atatgggacctcgagacgggacgctgcacgcatgtattcggcgggcacaccagcactgtc
cggtgtctagcgatcgtgaaaccggagatgatagactacgagaacgagcatggcataatg
gtcagagagaaatggccaaaacgaccgctcattgtcaccggcagccgagaccactcgttg
cgtgtgtggacgttgccacgacccggagatgaagagtacaggtgttatggcgcggatgat
accgaggttgacccttcagaggaggacgtcgacgataacccgtatcataagcttcacctc
gaaggccacgaccacgcggttcgcgcgcttgccgcccgaggacgcacactcgtatcaggg
agctatgactgcaccgttcggatctgggacatcatcactggagactgcaagtgggttttg
gttggacacacgcagaaagtgtacagtgttgtccttgacatcaaccgtaatctcgcttgc
tcgggttctatggatggcaccgtccgtgtttggaacctcagtaccgggcagtgtcagcac
atcttggccgggcacacctcccttgtcggcctactcggcctttcgccgtcctacctcgtc
tctgccgctgcggattcaacactccgagtctgggatcccgacagcggcgagcttcggcac
acgctagccgcgcacagcggtgcgatcacatgcttccagcacgacgagttcaaggtcttg
agtggctccgacgggacgcttaagatgtgggacatccgggacggcacgcaagtgcgggac
ctcctcactggtatcgtcggcgtttggcaggtcgtcttcgagggccgatggtgtgtcgca
gcaagcaatcgtatggactctaccgttctagatgtatgggacttcggcaacgacgaggac
gaggactgggagggagagccccctggcggcctgtacgacgaggaatcagattatgacgag
gaggaagaggaggatcttgaccgaacacaggcggaggtggacgcgatggatcaggatctc
gacggagtgctctcggacgctgagttcgcagacgccgaccaggaccaggaactagggacg
accgatgatgacgatcacgaggggcgacccgccgcctggcgaggactctccctgtccacc
gacgccgatgacagcacgaaggggtccactagccgggagacgtccgcgagtcattaccgt
agccgctcatccgcccggacaagatcgcagcgcgaggcaccgtcgtccgcaggcccctcg
gagccgcagctgcgcatgctgccgacgctggaggagacccccacacggccgcgcacgcgg
aacgcaggccaccgcaggcggtggcagccgtag
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