Trametes versicolor: TRAVEDRAFT_149048
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Entry
TRAVEDRAFT_149048 CDS
T04795
Name
(RefSeq) Sm-like ribonucleoprotein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
tvs
Trametes versicolor
Pathway
tvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRAVEDRAFT_149048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_149048
03041 Spliceosome [BR:
tvs03041
]
TRAVEDRAFT_149048
03032 DNA replication proteins [BR:
tvs03032
]
TRAVEDRAFT_149048
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
TRAVEDRAFT_149048
Spliceosome [BR:
tvs03041
]
Complex A
U1 snRNP components
Sm proteins
TRAVEDRAFT_149048
U2 snRNP components
TRAVEDRAFT_149048
Complex B
U1 snRNP components
TRAVEDRAFT_149048
U4/U6.U5 tri-snRNP components
TRAVEDRAFT_149048
Complex C
U2 snRNP components
TRAVEDRAFT_149048
DNA replication proteins [BR:
tvs03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
TRAVEDRAFT_149048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
19409669
NCBI-ProteinID:
XP_008038873
JGI:
149048
LinkDB
All DBs
Position
Unknown
AA seq
178 aa
AA seq
DB search
MPPPKSKGGKMLSLINWRLKVTINDGRAFVGQMLAFDRHMNLVLAECEEFRRVRPKKKAG
ETEAGPMQEMKRTLGLVILRGETVVSLSVEGPPPVTDEDKKNAMPFGPGRGAPAGRGMPM
MPPGAPGGIARPPMPFAPPGMGGPPPGFRPPGFPGGPPGMPGFPPPPGFGGPPPGFQQ
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgcccaagtccaagggtggcaaaatgctgagcctcattaactggaggctcaaa
gtcacgatcaacgacggccgcgcgttcgtcggccagatgctcgcgttcgaccgccacatg
aacctcgtgctcgcggagtgcgaggagttccgccgcgtccggcccaagaagaaggctggc
gagaccgaggcgggcccgatgcaggagatgaagcgaacactcggcctggtcatcctgcgc
ggtgaaaccgtcgtctcgttgagcgtggagggtcccccgccggtcaccgatgaggacaag
aagaacgcgatgccgttcggtcctggacgaggagcacccgcgggtcgtggtatgccgatg
atgcctcctggtgctcccggaggaattgcgcgcccacccatgccgtttgcccctcccggt
atgggcggtcctcccccgggcttccgccctcctggtttccctggaggccccccgggcatg
cctggcttcccccctccccccggcttcggtggccctccacctggcttccagcagtaa
DBGET
integrated database retrieval system