Trametes versicolor: TRAVEDRAFT_28276
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Entry
TRAVEDRAFT_28276 CDS
T04795
Name
(RefSeq) CCR4-NOT core ubiquitin-protein ligase subunit MOT2
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
tvs
Trametes versicolor
Pathway
tvs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRAVEDRAFT_28276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvs03000
]
TRAVEDRAFT_28276
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_28276
04121 Ubiquitin system [BR:
tvs04121
]
TRAVEDRAFT_28276
Enzymes [BR:
tvs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
TRAVEDRAFT_28276
Transcription factors [BR:
tvs03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
TRAVEDRAFT_28276
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TRAVEDRAFT_28276
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TRAVEDRAFT_28276
Ubiquitin system [BR:
tvs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
TRAVEDRAFT_28276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Prok-RING_4
zf-C3HC4_3
zf-RING_2
Baculo_IE-1
zf-RING_UBOX
zf-UDP
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
19412973
NCBI-ProteinID:
XP_008036140
JGI:
28276
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MATRIHTNSPLPAPALHATHALPQSKSHVLAGVQDAYWSDDEAEDAECPLCLEEMDISDL
NFKPCPCGYQVCQFCWHHIKENLNSRCPACRREYTDDAVQFKPINPEDHKRLTQQKKQRE
RERKELETLNRRHLANVRVVQRNVVYVVGLGPRFAKEELIPTLRSNEYFGQYGKISKIVI
VKRTPPGGRAPVIGLYITYHRREDAARAIAAVDGASSPGGGGEIMRGSYGTTKYCMAFLR
GVSCADHSCMNLHEWGDEKDCFTKEDLTTLKHTMKDTETRSRTTTIKKGDEAEGLPRAAS
WANKSNTTLASTALHNNTSAANSVLRQTRRAGTTTRQQRSGSTTATIGPAITEIRKKGVA
KAPSQASSSRPATPAGHLPNRPVTPAATRQARVKETAPPPPPPRSPTSSVAVDSDVGSAA
PEVPSPQSPSSVVPKEIPAAPPGLPAVPPGLSPVVPPGLAAPPGLPPPSSRATSEAASSP
QIPMQHASSSYQMSTQAQALMEDLRARRESTISVAVQSPFPDFDRMLQSLGNDTEFGGFS
FNLDPKLVGDVPEEALALPDFDIGPAVPFNGSFFDAFPALRPSAQTPPNPLMPPPGLGVA
SQPHRGVFDALPQRGPLERQSTGSSYTGSFNPFGGDNMDDAPSRKFSPLDEERKVSRFGF
ARGRQGSASSPLHAPSPLSNHDSMSHVAHLNNAAEYANHGTQQWPFQARHHEFAQYQSSS
AMSSPLAQHMQAAQQPFGQHHHQQQQQPQQQQMNRFQQAYDNSVSEQQLRELLMSSRDRT
NGSRNGPMDPSLYGGPQYNDPAIMSARMSSPSLSQTLQNGRFPTSGLEAYGNHPMSFGPP
PGLSFPADESVTSPVISNHHGYGGASGPSTNLEVSQTSGSAHVRKLYHRP
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggctactcgaattcacaccaactcacccctcccggccccggcgttacacgccacccat
gcgcttccgcagtctaagtcgcacgtcctagcgggtgtgcaagacgcgtactggagcgac
gacgaggcggaggacgcggaatgcccactctgccttgaggagatggacatatccgatctc
aacttcaagccatgcccttgcggttaccaggtctgccaattctgctggcaccacatcaag
gagaacctcaacagccgctgcccggcgtgtcggagggagtacactgatgatgcggtccag
ttcaagccgatcaatcctgaagatcacaagcgcttgacacagcagaagaagcaaagggaa
cgcgaacgaaaggagctagagaccctcaaccgacgtcaccttgcaaatgtccgcgttgta
cagcgcaacgtggtgtatgtcgttgggcttgggccgaggtttgcaaaggaagagctcata
ccaactctgcgttcgaatgagtacttcggacagtacgggaagatctcgaagattgtgatc
gtcaagcgcacgccgcctggtgggcgagcgcccgtaattggtttgtacatcacataccac
cgacgtgaagatgcggcacgggccattgcagccgtcgatggtgcctcttctcccggtgga
ggcggtgagatcatgcgcggcagctatgggacaacgaagtactgcatggcgttcctccga
ggcgtcagctgtgccgaccatagttgtatgaaccttcatgaatggggtgacgagaaggat
tgcttcacgaaggaagacctcacaacgctcaaacacaccatgaaggatacggagacgcgc
tcgcgtactaccacgatcaagaaaggtgacgaggcagaaggtcttccccgtgcagcatcc
tgggcgaacaagagcaacaccacgcttgcgagcactgcgctgcacaataatactagcgct
gcgaactcagtattgcgacaaacacgacgtgccggcacgacaactcgacagcaacggtcg
ggttcgacaacggcaacgattggccctgctatcactgagattcgcaagaagggcgtagct
aaggcgccttcacaagcatcttcgtcgcgtcctgctacacccgctggccacttgccaaat
cggcccgtcactcctgctgcaacaagacaagcgagggtcaaggagaccgcgccgcctcct
ccacctccacgatcgccgacgtcatctgtcgctgtcgattcagatgttggctcggcggca
ccagaggtgccttctccgcagtccccgtcgtctgtagtgccgaaagagataccggcagca
cctccaggtcttcctgccgtccctccaggtctttctccggtggtcccgcccggcctggct
gctcctccgggccttcccccgccgtcgtcaagagctacttcggaagctgcgtcatcgccc
cagattcccatgcaacatgcgtcgtcgtcataccagatgtcgactcaagcacaggctctc
atggaggacctccgggcgcgacgggaatccacgatttccgtagccgtccagagtccgttc
cccgacttcgaccgcatgctccagtccctgggcaacgatacggagttcggtggcttcagc
ttcaacctcgaccccaagctggttggagatgtgccggaagaggcgctcgcattgccggac
ttcgacattggtcctgcagtgccattcaacggaagcttcttcgacgccttccctgcgctg
cgtccgagtgcgcagacaccgccaaacccccttatgccccctcccggactcggtgttgca
tcgcaaccacatcgcggagttttcgacgccttgcctcagagagggccactcgagcgtcaa
tccacaggatcaagctatactggttcgttcaaccccttcggcggggacaacatggatgac
gcgccctcgcgcaaattctcgccgctggacgaagagcgcaaggtctctcggttcgggttc
gcgcgaggtcgtcaaggctcggcgtcatccccacttcacgcaccttctcccctcagcaac
cacgacagcatgtctcatgtcgctcatttgaacaacgccgccgagtacgccaaccatggg
acgcagcagtggcccttccaggctcggcatcacgagttcgctcagtaccagagcagctct
gcaatgagctcgccgctggcccagcatatgcaagccgctcagcagccgtttgggcagcac
catcaccaacagcaacaacaaccgcagcagcagcagatgaaccgtttccagcaggcgtac
gacaacagtgtcagcgagcagcaactgagggagttgctcatgtcgagtcgcgaccgcacg
aacggatccaggaacggaccgatggatccaagcttatacggaggtcctcagtacaacgat
cccgctatcatgtctgcacgcatgtcgtctccgagcctatcgcaaaccctgcagaatgga
cggtttcctacgtccggcctagaggcctatgggaatcaccccatgtcgttcggccctccc
ccggggctgtcctttcctgcggacgaatcggtaacaagtccggttatctcgaatcaccac
ggctacggaggcgcaagtgggccttcgacgaacctggaggtgtcgcagacgagcggatcc
gcacatgtgcggaaactgtatcaccggccttga
DBGET
integrated database retrieval system
