Trametes versicolor: TRAVEDRAFT_57146
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Entry
TRAVEDRAFT_57146 CDS
T04795
Name
(RefSeq) uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
tvs
Trametes versicolor
Pathway
tvs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRAVEDRAFT_57146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_57146
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_57146
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TRAVEDRAFT_57146
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
TRAVEDRAFT_57146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
CFIA_Pcf11
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
19417831
NCBI-ProteinID:
XP_008035204
JGI:
57146
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MSLYPQSTAYNQMAYPPQGYGAPVPPPNAYYPPPPAPQPVYQHFDPNTFRRDYATRLSNL
TVNSRPIIQSLSMIAQEFTRFADVVVQCIEQHIRRVPAWMKLPAFYLLDAISKNVYDPYA
RHFSPVVANLFIETYEAVDPTTRSKMEEMLLTWRNGAPNNRELFGVVPQLAIEQHIWGSG
ASHNAVRTSRRRPKRTPHKRADQSGSRATNTSAISQAQVLSELEFVLAQKERTVQSNPYD
KTTQHHVNILQQLRSLVQVGVSQEELKQILAQLRALATTATPAMPPPAPAPAPAHYASAP
SYAPPPPMPPAPPPAPQHSYAQHSYSVPPEQPKVEQIDLSRFLTSQPAPTASTSTAAPVS
DITNLFNALVKAGVVGTPTNAGATSKSEERVSSVDPQREAVRAYRKSVLSHKIKLTSSDI
TRQRPPIVNLLYQNLPTQCKQCAVRFPGDARGKKLLEDHLDMHFRQNRKASQAIGRGHSR
SWFVTLEDWVHSDSVDVKGKGRADGRSLTSKAAVAEEAAKREAELRAMHVVVPPGDEAKP
ISCPICKEHLKSEFLEDDEEWVWRNAVKKDDRIYHATCHAEAVASKSTLAVRLRNETSSR
SRSHTPETPKDYLLSESPSPSRRAGLKRKAEDESANPATNEMDAPQVKRVAT
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcactctacccgcagagcactgcgtataaccagatggcgtatccgcctcagggttat
ggcgccccggtaccacctccaaacgcctattatcctcctccacctgcgccccagcccgtc
taccagcatttcgaccccaacacattccgccgtgactatgccactcggctttctaatctc
acagtaaattccagacccatcatccagagtctgtcgatgattgcacaggagttcacccgg
ttcgccgatgtggtcgtacaatgtatcgagcaacatatccgtcgggtgccggcatggatg
aagctgcccgcgttctatctgctagacgccatctccaagaatgtctacgatccctatgca
cgccacttcagtcccgtcgtcgccaacctcttcatcgagacgtacgaggccgtcgatccc
acgactcgcagtaagatggaggagatgctcttgacctggcgtaacggcgctccgaacaac
cgggagcttttcggcgtagtgcctcagctcgccatcgagcagcacatctggggtagcggc
gctagccacaacgctgtacgtacctctcgccgacgacccaagcgtacccctcataaacgt
gcggatcagtccgggagtcgcgcgacgaatacatccgccatatcccaagcgcaagtcctt
agcgaattggagtttgttctcgcgcagaaggagcgtaccgtgcaatccaacccgtacgac
aagaccacccagcatcacgtcaatatcctacagcagctccgctcacttgttcaggtcggc
gtctcgcaagaggagctcaagcaaatcttggcccaacttcgtgcactcgctaccaccgcg
accccggcaatgccacctcccgcccccgcccctgctcctgcccactacgcctccgctccc
tcatacgcccctccccctccaatgccccccgcccctcctcccgctcctcagcatagttac
gcccaacattcctactctgttccacctgagcagccgaaggttgagcaaatagatctgtct
cggttcttgacctctcagcccgcccctacggcgtcgacgtcgactgccgcacccgtaagc
gacataacgaatctgttcaatgcgctcgtcaaggctggcgtggttggaactcccactaac
gcgggcgctacctccaagtccgaggagcgagtgtcttcggtcgatccgcagcgtgaggca
gtacgcgcctaccgcaagtcggtgctttctcacaagatcaagctcacgagttctgacatc
acaagacaacgcccgcctatcgtcaacttgctctaccagaaccttcccactcagtgcaag
cagtgtgccgtgcgctttcccggcgacgcccgtgggaagaagcttctcgaggaccacctc
gacatgcacttcaggcagaatcgcaaggcaagtcaagcgatcgggcgtggccacagtcgc
agctggttcgtcactctagaggactgggttcatagcgactccgtcgatgtgaagggcaag
ggtcgcgccgatggtcgatcgctaacatctaaggctgctgtagcggaggaggccgctaag
cgtgaggcggagttgcgcgcgatgcatgtcgttgtcccgcctggcgatgaagcgaagcca
atatcatgtccgatctgtaaggagcatttgaagagcgagttccttgaagacgacgaggag
tgggtgtggcgaaacgcggtcaagaaggacgacaggatatatcatgcgacctgccacgca
gaggcggtcgcgtcgaagtcgactctagcggttcgcttgcggaacgagacgtcgagccgg
agtcgttcgcataccccggagacgcctaaggactacctcctttcagagtcaccgtcgccg
tccaggcgcgcagggctgaaacgtaaggctgaggacgagtccgcgaatcccgcgacgaac
gagatggacgcgccgcaggtgaagagagtggcgacatga
DBGET
integrated database retrieval system
