Trametes versicolor: TRAVEDRAFT_60908
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Entry
TRAVEDRAFT_60908 CDS
T04795
Name
(RefSeq) uncharacterized protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
tvs
Trametes versicolor
Pathway
tvs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRAVEDRAFT_60908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_60908
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
TRAVEDRAFT_60908
U7-dependent histone pre-mRNA processing factors
TRAVEDRAFT_60908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
Motif
Other DBs
NCBI-GeneID:
19418247
NCBI-ProteinID:
XP_008043802
JGI:
60908
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MSKVVFVGNVPYNMGEDSLIDVFKSVGQVVGLRLVFDRETGKPKGYGFCEFADHETALSA
VRNLNGQEIGGRPLRIDLADSDPFLEGKTTVRGEIIDGGETRAQWRERHGHERDRHDRHD
RDDSRHGRGPDPNAFLASLPKGVPLTPNQNALDAISQVLASTEPTQILEVLAQMKAFVIT
HPEQARALLVAHPQLGYALFQALLLHKIVDPAILNRMLAATGAAPPTPVPAPPPPQPQVQ
QPAPYMPPPVAMQQPPPMYPQAIPPPSQTPVHHPTPPIPNMYAQPPPQMQPPPYYRPPPP
AAPPSIPQQYQQQPGPPQMPGQHPMQMPPPSALHAPPQVPLAQQTAAVPEFDQTQRDMLM
QVLRLTADQLNTLPPTEREQIMQLRRQFGVGA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtcgtctttgtgggaaatgtgccatacaatatgggcgaagactcgctcatc
gacgtattcaaaagtgtcggtcaagttgttggcttgaggctagtgtttgatagagagacc
ggcaagcctaagggttacggtttctgcgagtttgcagaccacgaaaccgcgctttccgct
gtgcgcaacctcaatggccaggaaataggaggccgcccactcaggatcgacctcgcggac
tctgatcccttccttgaaggcaaaaccacggtgcgtggcgaaatcatcgacggcggcgag
acgcgtgcacagtggcgtgagcgccacggccacgagcgcgaccgtcacgaccgtcatgac
agagatgattctcgccacggtcgtgggccggacccgaacgcgttcctagcaagccttccc
aaaggtgttccccttacacccaatcagaatgcgctagatgcgataagccaggtgctggca
agtactgaaccaactcagatcttggaggtgctcgcgcaaatgaaggcgtttgtaatcacc
catccagagcaggcgcgtgcacttcttgttgcacacccgcaactggggtacgccctcttc
caagcccttctgttgcacaaaatcgtggatcctgccatcctcaatcgtatgctggctgcc
acaggtgctgctccgcctacgcctgtgcctgcacctccgccccctcagccacaagtgcaa
caacctgcaccgtacatgccacccccggtggcaatgcagcagcctcctccgatgtaccct
caagcgattccacctccgtctcaaacgcccgtgcaccatccgacaccccctatcccgaac
atgtatgcgcagccgccaccgcaaatgcaacctccgccatactaccgccccccacctcct
gctgcgcctccatcaatcccccagcagtaccagcagcagccggggcccccgcagatgcct
ggccagcacccaatgcaaatgcctcccccatccgcattgcatgcgcctccacaggtgcct
ctcgctcaacagacagcagctgtccccgagttcgaccaaactcaaagggatatgttgatg
caagtgctgcgcttgacggccgatcagctcaacacgttgccgccaacagagcgtgagcag
atcatgcagctgcggagacagttcggtgttggagcgtaa
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integrated database retrieval system
