Trametes versicolor: TRAVEDRAFT_71533
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Entry
TRAVEDRAFT_71533 CDS
T04795
Name
(RefSeq) uncharacterized protein
KO
K10706
senataxin [EC:5.6.2.-]
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_71533
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TRAVEDRAFT_71533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEN1_N
AAA_11
AAA_12
AAA_19
AAA_30
UvrD-helicase
Viral_helicase1
nSTAND3
AAA_22
ResIII
Motif
Other DBs
NCBI-GeneID:
19419461
NCBI-ProteinID:
XP_008037811
JGI:
71533
LinkDB
All DBs
Position
Unknown
AA seq
1937 aa
AA seq
DB search
MAPQPHNRDVAKKKLVELRDSPKTLVGDEDLRITSIYLLGSLKPADNTSETPLAHDHWFC
SQADEVTREAAIFLIRLHAYNSASVDIWRLQLKRVITRCCYCVRGLHEAETMSRHTYFGA
FGEQILQNFYVSFHKFLTDTAVEALAEKGFVASDTGDPSRTLAEAPPAVTFLVLTYLHML
QDSRIVALLHSFCPRAPIKSWPSDIPPPVLLALLFDGTAEVRSWAQKQSTLCEVAPIPTD
NFLPAHATVLKAAADSIASSRPLSDSFGSDYKLSFVTDIPSRWSSLTTLLRFIPVEHFRS
SKSFDLDVRRIVIGHLHDIGEHFIDILKCFVIVLRRMGPDVWQDEGPEYAHVVFNSIKDN
TRFADVLCNLSVPVPKDDWQLKWIEVYANTVGKLPVFKDILPSVLQFLCEELQHERFKAV
RPNAMSIASRLLVAVLAQQGKDGNSKQDLALDLLTVHSSAFVNVAFGRSYTDEIWADARK
QTCRLIKQALLTDVRRLVSAITRLCSSNESTAATPPSLIHEQVWKNVYEGIAGGDSDAAA
LLLAVLSQISHVDDLKPVAFEEAFKKSKSPSTSQASLVAVNSALAVLRNGFRDVLNRYTD
LSPGSAAIELLGRDDVVKHVVSLMFSPVETLQEAAQGIVALAYDVDGRLDCFRALLEHFP
DAALSGINDVLGAYIQYAKVVPEACYLSQALARCLTDIIEALCSSPSGLLLQSSYVKTAA
STLEDKIPKWWHAMTEALCVIFAYTPRWARFFENEEMVLWMRDALIFGRDLLAQRRILET
GTLARSQKGAGSSAKLTNVGKKMVDDLQQVLFELTKWLRLTDEELLHQSFALLETLLECF
RQTETRPRAETFQRIQRHIDDARKNDPNRMKSRLDSTRLVRLEEAVSAFDEADEEIQIIS
HIKPTKPKKTAKVKEDQKAAPRHILKAGPSKDIQLKDINRKGKAGISSYFSLNDEKKPVA
ASSVSRYGVPSVSGRSLPSAGPSRVSKPLIKDERSSAKANSTSSRATSPSSSENEQSEDE
EDEGPKGLAALSKLQRTPAIKQPTERRQVKMLDMPLEGRGIKFDRLQKRDDARRTHMRLK
PDVSGLHRTLLSWNYEHLGPEPPWDRPKLLPVPDRFRDYAHFRSVFEPILLLECWNQLQE
SKETTQESNDVRINNRQYTDQYMDVDISFEGSVSKDWNLSDMDIVLFTHPGSKRRVMGKT
QNYRSSYMGIQATVRFLVQGADPGLQVGTVWSLSKVLSLSTLIREYASLMALPHYDLLDS
VLHAQLSQPSRTDSGEVQKVMTTYKVNEPQANAIIKSLATEGFALIQGPPGTGKTSTICG
LVQLYLARRPKTSSVIHPGRPAERELPKKILLCAPSNAAIDEIAFRLKEGVSGAGHRAEH
PKVVRIGALKSMNLSVRDVSMEYLIDQKLNSDPGLKNTKEAGTELSRVRSELEAVKRQRQ
EKIEELATIQDNASKTLALEEDVKRLNRQKAMLTHQLDKVKDKQKSDYRTLDATRRRFRN
EVLQEADVICSTLSASAYEYLESFDFELVIIDEAAQAIELSSLIPMKYRCRTCIMVGDPQ
QLPPTVKSQEACKLGYDQSLFVRLQRSQPEAVHLLSIQYRMHPDISQLPSNLFYGGRLLD
GPDMAEKTKRAWQTHPKFGTYRFFNVQAGVEESGAGHSLVNRAEAQVAVALYNRLCKEFS
SANMDFKVGVISMYRGQILELRRAFQQRFGEEVLSMVDFNTVDGFQGQEKDIIILSCVRA
GPGVQTVGFLRDVRRMNVALTRAKASLFVLGNAPTLERSDETWRKIVENARSRSSLVNVD
AAYFTAPVTAAQSKPPSQIKQAKPASKPPSNITPAVPDDLVTPRELKALANRPNGNASSP
TGAPTSRKASVAGPSTAVSTEDAQVGQKRKAEETPKEEAARPNGAPGPGPKPRPKPPLVK
RPKQGPSLFIPKKRPAP
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atggccccgcagccgcacaacagggatgtggcgaagaaaaagcttgtcgaacttcgcgac
tcccccaaaaccctcgtcggggatgaggatctccgaatcacctcaatctaccttctcgga
tcactcaaaccggcggataacacatcagagacacctcttgctcatgaccactggttctgc
tctcaggcggacgaagtcacgagggaagccgccattttcctcatacgtctacatgcatac
aacagtgcctcggtggatatctggaggctacagctcaaacgtgtcattacgcgatgctgc
tactgcgtaaggggtctccatgaggcggagacaatgtctaggcatacgtactttggtgct
ttcggggaacagatcctccagaacttctacgtcagctttcacaagttcctcactgacact
gcggttgaagctctggcagagaagggtttcgttgcctctgacactggcgatcctagtcgg
actttagctgaagcaccccccgccgtcacgtttctggtcttgacatacctacacatgctg
caagactctcggattgtcgccctccttcattcgttctgtcctcgtgctccaatcaaatct
tggccttccgacataccgccgccggtactgcttgctctcttgtttgacgggactgcagaa
gtccgttcatgggcccagaagcagtccacgctatgcgaggttgctccaattccaacggat
aactttcttccagcacatgcgaccgtcctgaaggctgctgctgattccattgcgtcctct
cgtcctctgagcgactcttttggatcagactacaagctttccttcgtaaccgacatccct
tcgcgatggtccagtcttacgaccctcttgcgattcatccctgtggaacattttcggtcg
agcaaatcgtttgatttggacgtccgccgcatcgtcataggtcatttgcatgacatcgga
gaacatttcatagatatcctgaagtgcttcgtgatcgtcctgcggcgtatgggacccgac
gtatggcaggacgaaggtcctgagtacgcgcatgtggtattcaactccatcaaagacaac
acgcgtttcgcggacgtcctgtgcaacctctctgtgccggtgccgaaagacgactggcag
ctcaagtggatagaggtctacgccaacactgtgggcaagctccctgtgttcaaggacatc
cttccatctgtcttgcagttcctctgcgaagaacttcagcacgaacgtttcaaggccgtt
cgcccgaatgctatgagcatcgcatctaggctgctggtcgcggtcctcgcgcagcaaggc
aaggacggaaactccaagcaagatctcgccctcgacctcttgacagtccactctagcgcg
ttcgtcaacgtggcattcggacggtcgtacacggacgagatttgggcagacgcaaggaag
cagacatgcaggctgatcaagcaagcgcttttgacggacgtccggaggctcgtctctgcg
atcaccaggctctgctcctcaaacgaatcgaccgccgcaactcccccgtccttgatccac
gagcaagtgtggaagaacgtctacgaagggatcgctgggggcgattccgacgcggctgcc
ctcctgcttgcggttctctctcagatatctcatgtagacgatctgaagccggtcgcgttc
gaggaggcattcaagaagtccaagtcccctagcacgtcacaagcctcccttgtcgcggtg
aatagcgcactcgctgtcctacgcaacggcttccgagacgtcctcaatcgctacaccgac
ctgagcccagggtctgccgcgatagagctcctcggtcgggacgacgttgtcaagcacgtc
gtttccctcatgttctccccggtagagaccctccaggaggccgcgcagggtattgttgcc
ttagcgtacgacgtagatggccgtctcgactgcttccgtgcgctattggaacatttcccg
gatgccgcgctcagcggaatcaacgacgtcctgggcgcatatatccagtacgcgaaggtc
gtaccagaagcgtgctatctgtctcaagccctcgcgcgctgtctcaccgacatcatcgag
gcgctgtgttccagcccctctggcctcctcctccagtcctcatacgtcaagacggcggcg
tctacgctcgaggacaagataccgaagtggtggcacgcgatgacggaggcgctctgcgtc
atcttcgcgtacacgccccgctgggcgcgtttcttcgagaacgaagagatggtactctgg
atgcgggacgcgctcatcttcgggcgcgacctgctggcacagcgcaggatactggagacg
ggcacgctcgcgcgctcgcagaagggggccggctcgagcgcaaagctgacgaacgtgggg
aagaagatggtcgacgacctccagcaagtgctcttcgagctcacgaagtggctgcgcctc
acggacgaggaactgctgcaccagtccttcgcgctcctggagacactgctcgagtgcttc
cgccagaccgagacgcgcccgcgtgcagagacgttccagcgcatacagcggcacatcgac
gacgcgcgaaagaacgacccgaaccgcatgaagtcgcgcctggactcgacgcgcttggtg
cggctcgaagaggctgtcagcgcgttcgacgaggccgatgaggaaatccagataatctcc
cacatcaagccgacgaagccgaagaagactgccaaagtcaaggaggaccagaaggcggcg
cctaggcatatcctgaaggcgggcccgtcgaaggatatccagctaaaggacatcaatcgc
aagggcaaggcgggcatctctagctatttctcgctcaacgatgagaagaaacctgtcgca
gcctcctcggtttcccgctacggagtcccgtctgttagcggtcgctctcttccttccgcg
ggtccttcgagggtgtccaagcctctcatcaaggacgagagatcatcggcaaaggcgaat
tccacctcctcacgtgccacgtctccaagtagtagcgagaacgaacagagcgaggacgaa
gaagacgagggcccgaagggtttggcggctttatcgaagttgcagcggacccccgcaatc
aagcaacccacagagcgacggcaggtcaagatgcttgacatgcctttggaaggccgcggc
atcaagttcgaccgactgcagaagcgcgacgacgcacgtcgtacccacatgcgcctgaag
ccggacgtctctgggttacatcgcacgctgctctcgtggaactatgagcatttgggaccc
gagcccccttgggacaggccgaagctactgccagtcccggatcgtttcagagactacgca
cacttccgcagcgttttcgagcccatcctactcctcgagtgctggaatcaacttcaagaa
tccaaggagactacgcaagagtccaacgatgtcagaatcaacaatcgccagtacaccgac
cagtatatggacgtcgacatctcgttcgaaggcagcgtctcgaaggactggaacctctcg
gatatggatatcgtactgttcacgcatcctggttccaaacgtcgggtcatggggaagacg
caaaactaccgttcctcgtatatgggcatccaagctaccgtacgtttccttgttcagggt
gccgacccagggttgcaagtaggtactgtgtggtctttgagcaaggtcttgagtttgtcg
acactcatccgcgagtacgcctccctcatggcccttccgcactacgacctcctcgacagc
gtccttcacgcacaactgtcgcaaccttcaagaaccgactccggggaggtacagaaggtc
atgaccacgtacaaagtgaacgaacctcaagccaacgccatcatcaagtcgcttgccacc
gagggattcgcactgattcagggacctccgggtaccggtaagacgtcgacgatttgtgga
ctggttcaactgtacctcgcgcgacgtccaaagacgtcctcggtcatccatcctggccgc
cccgccgagcgcgagcttcccaaaaagatcctgctttgcgcgcccagtaacgctgccatc
gacgagattgcgtttcgtctgaaggaaggagtatcaggtgcgggacacagggcggagcat
ccgaaggtggtgcggattggtgcgctcaagagcatgaacctgagcgtccgggacgtgtcc
atggagtatctcatcgaccagaagctcaattctgatccggggttgaagaacaccaaggag
gctggtaccgagctgtcccgggtgcggtctgagctcgaggccgtcaagcggcaacggcag
gagaagatagaggagcttgctacgatccaagacaacgcttcgaaaacgctcgcactggag
gaagatgtcaaacggttgaacaggcagaaggcgatgctgacccaccagctcgataaggtg
aaggacaagcagaagtccgactaccgcacgctcgacgctactcgacgacggttccggaat
gaggttcttcaggaggcggacgtgatttgcagcacgctctctgcttccgcatacgagtac
ttggagtccttcgacttcgagctcgtgattatcgatgaagccgcccaggccattgagctg
agctctctcattccgatgaaatacagatgtcggacgtgcatcatggttggagatcctcag
cagctgcccccgacggtgaagtctcaggaggcgtgcaagctcggatacgaccagtcgctc
ttcgtcaggctgcagaggagtcagccggaagcagtacatctactgagtatacaataccgt
atgcaccccgatatcagccaactgcccagcaacttattctacggcggacgcctgctggac
gggcctgatatggcggagaagaccaaacgagcatggcaaacgcacccgaaattcggcacc
tatcgcttcttcaacgtgcaagctggcgtggaggaaagcggcgcgggacactcgctggtc
aatcgcgccgaggctcaggtcgcagtagcgctctacaatcggctgtgcaaggagttctcg
tccgccaacatggacttcaaagttggcgtcatttccatgtatcgcggtcagatcctggag
ctgcggcgagcgttccaacagcgatttggggaggaagtcttgagcatggtcgacttcaac
acggtcgatggcttccagggacaagagaaggacatcattatcttgtcttgtgtccgtgct
ggaccgggcgtacagactgtcggtttcttgcgagatgtgcgtcgtatgaacgttgccctg
acccgagcgaaagcatctctgttcgttcttggtaacgcccctacgctcgagcgcagtgac
gagacttggcgaaagattgtggagaacgcgcgctcaaggtctagcctcgtcaacgtcgat
gctgcatactttacggcgcccgtaaccgcagcacaaagcaagccgccttcgcagatcaaa
caggccaagcccgcgtcgaagcctccgtcaaatatcacacctgccgtcccagatgatctc
gttactccccgcgagctcaaggcgcttgcgaaccgtcccaacggcaatgcctcgtctccg
actggcgctcccacgtcgcgcaaggcgtccgtcgcgggaccatcaaccgcagtgtctaca
gaagatgcacaagtgggacagaagcgaaaggcggaggagacaccaaaggaagaagcagcg
cgtccaaacggtgcccccgggccaggaccgaaaccgcgaccaaaacctcccttggtcaag
cgtccaaaacagggcccgagtctgttcataccgaaaaagcgccctgctccatga
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integrated database retrieval system
