Tropheryma whipplei Twist: TWT_696
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Entry
TWT_696 CDS
T00116
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
twh
Tropheryma whipplei Twist
Brite
KEGG Orthology (KO) [BR:
twh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twh03032
]
TWT_696 (topA)
03400 DNA repair and recombination proteins [BR:
twh03400
]
TWT_696 (topA)
Enzymes [BR:
twh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TWT_696 (topA)
DNA replication proteins [BR:
twh03032
]
Prokaryotic type
DNA Topoisomerases
TWT_696 (topA)
DNA repair and recombination proteins [BR:
twh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TWT_696 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AAO44793
UniProt:
Q83FM2
LinkDB
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Position
complement(809819..812344)
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AA seq
841 aa
AA seq
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MKKLVIVESPTKVSSVGRYLGDGYVVMSSVGHIRDLPAPSGLTPDLKRSAHAQFAVNIEN
DFEPYYVVLENKKKVVEELQSALNNSDELLIATDGDREGEAIAWHLVQVLKPTVPVRRLV
FHEITREAIAYALQHPRPIDENLVDAQEARRILDRLYGYELSPVLWKKVRPGLSAGRVQS
PATRLLVDRERERINFKSAEYQAVTADFQVDSDVFSASLTLFGERKIATGRDFDNLANLK
TDALVLDKNLTDRILEELKSKGALDVEAIDSKPYSRNPYAPFITSTLQQDAAHKLGFSAK
RTMRTAQQLYEKGFITYMRTDSPRLSLQAISAARAQVELLYGREFLPDSPRTYGAKAKNA
QEAHEAIRPTGEVFERPESIESVLSVDCMRLYDLIWRRTIASQMVSARGETVTLTLSARI
PERSIFVLSGTVLHEKGFLKVYEGLQDLNSKLLPNLQVGDQVTLVDVRAVGHTTLPPPRY
TEASLVKVLEELGLGRPSTYALILSTIQERGYAHLRNRMLVPDWLAFSVVNLLENFFSRL
IDYDFTANLEDQLDEIALGSQNRSDWLRKFYFGDDNLPGLKEIISGAKDIDARAINSIPM
VGATLRVGRYGPYLEVGDKRFSIPHDVYPDALTPEKIHELVNQPESPVRELGAHPETGKL
VVLKSGRFGPYIEEVSDEKNVRRSSLFKNMDPEEVNLDVAVKLLEIPRVIGVNQENGEKV
IACNGRFGPYIKCGKETRPLDSEDDILSVTLDEALAILSAPKVRRSRVLMEFPTDDPVTR
RAVQIKSGRFGPYVTDGVTNATLDNTSWEDVTFDEAVSLLAEKRQRVDGDLDQETAEKIH
V
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacttgttatagtcgagtcgccaaccaaggtatcgtcggttggtcgttacctt
ggtgacggttatgttgtcatgtcgtcagtagggcatattcgtgatttgcccgcccctagt
gggcttaccccagatcttaagaggtccgctcatgcccagtttgcagttaatattgaaaac
gattttgagccctactatgtcgtcctggagaataaaaagaaggtagttgaggagctacag
tcggccctgaataattcggacgagctccttatagcgacagacggtgatcgggaaggtgag
gcgatagcgtggcatttggtccaggttctgaagcctactgtgccggtgaggcgattggta
tttcacgagattactagggaagccatcgcgtatgcactacaacatccgaggccgattgat
gaaaaccttgttgacgcgcaggaggctcggagaattctggacagactctatggttacgag
ctatccccggtgctctggaaaaaggtaaggcccgggttgtctgccggtagagttcagtct
cccgctacccgacttctggtggatcgtgagcgtgaacggatcaacttcaagtcggctgaa
tatcaagcggtaacggctgactttcaggtggattccgacgtattctcagcttctttgacg
cttttcggtgagaggaaaatcgccaccgggcgtgactttgacaatttggcaaatctcaaa
acagatgctttagtactagataaaaatctaaccgatcgcatactcgaagagctcaaaagt
aagggtgctttggatgttgaagcaatcgattcaaagccgtatagcagaaacccttatgct
ccgtttatcacttccaccctgcagcaggatgccgcacataaactggggttctcagctaaa
cgaacaatgcgcactgcccaacaattgtatgaaaaagggtttatcacgtacatgagaacg
gactcaccacgtctgtctctacaagcgatttccgccgcgagagctcaggttgagcttctc
tacggaagggagtttctaccggattccccaagaacctacggggcaaaggcaaagaacgcc
caagaagcgcatgaggcgataaggcctactggcgaggtgtttgaaaggcctgagtcgata
gaatctgttttatcggttgactgcatgaggctttacgaccttatatggaggcgaacgatt
gcttcccagatggtatctgctaggggtgaaactgtcaccctgaccctctctgccagaatt
ccggagcgatctatttttgtcctgtccggaactgttctgcatgaaaagggtttcttgaaa
gtgtatgaagggttgcaggatctcaactctaagctattaccaaatttacaggtcggcgat
caggttacccttgttgatgttcgtgcggtcgggcacacaacccttccgcccccacgatac
accgaggctagcctggtaaaggtcctagaggagttggggctgggtcgcccatcaacatat
gcgcttattttgagcacaattcaggagcgcggctatgctcatctcaggaacaggatgctt
gttcctgattggcttgctttctctgttgtcaatcttcttgagaacttcttctctcgacta
attgattacgattttactgcgaacctcgaggatcagcttgatgagatcgcactcggctca
cagaatagatcggactggcttcgtaagttttactttggtgatgacaatcttcctggattg
aaggagataatttcaggcgcaaaagacatagatgcacgagcaatcaattcgatcccaatg
gtcggggcgactcttcgggtagggagatatggcccgtatcttgaagttggggataagaga
ttcagcattccgcatgatgtataccccgatgccttgactcccgaaaaaatacatgagctg
gttaatcagccagaatccccggtaagagaactcggcgctcacccggagaccggaaaatta
gttgtcttaaagtccggtcgctttggcccatatatcgaggaagtttcggatgagaaaaat
gtcagacgatcaagtctgttcaagaacatggatccagaggaagttaacttagatgtggct
gttaagctgctggaaatacccagagtcattggggtcaaccaagagaacggagaaaaggtt
attgcttgtaacggtcgctttgggccatatataaaatgtggtaaggagacacgtccccta
gacagtgaagatgacattctctcggtgacgcttgacgaggcattagccatcctgtccgca
ccgaaagttaggcggtcacgtgttcttatggaatttccaacggatgatccggtcacaagg
cgcgcagtgcaaatcaagtccggtcgctttgggccatatgtaacagatggcgttacaaat
gcaactttggacaatacatcgtgggaggatgtgacgtttgacgaagctgtgtccctgctc
gcggaaaagcgtcaacgggttgatggtgatcttgatcaagaaactgcagaaaagatccat
gtgtag
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