KEGG   Thermoanaerobacter wiegelii: Thewi_2144Help
Entry
Thewi_2144        CDS       T01607                                 

Definition
(GenBank) DNA polymerase LigD, ligase domain protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
twi  Thermoanaerobacter wiegelii
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:twi00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Thewi_2144
Enzymes [BR:twi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Thewi_2144
DNA repair and recombination proteins [BR:twi03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Thewi_2144
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
2172084..2173007
Genome map
AA seq 307 aa AA seqDB search
MSMIEEKISPMLASSSDPFDSPEWIYEIKWDGSRTIAFLSSKTRLQDRRLVDITYKFPDL
ALLHKQIKAKEAILDGELVVLKNGKPSYKSIMSRKHQQNLLKINLLSKIMPVIFITWDIL
YLNGKPLVELPLIERKDILRKTVKENEIIKISDFIFEHGKMLFEETGKKGLEGIVAKKAD
SKYLIGKRSKLWLKSKHFIVINAVIIGYRTDKTALILGLYDEENNLINIGSCESGLSQKE
LKAFYEVAKEIKAPDNYYNFKEKNVQWLKPLLTCKVRFMEWSENMKMRAPSFIQFEYNVK
PEECRFE
NT seq 924 nt NT seq  +upstreamnt  +downstreamnt
atgtctatgatagaagaaaaaatatcacctatgctggcatccagcagtgacccttttgat
agccccgagtggatatatgaaatcaaatgggatggttcaaggactattgctttcctttct
agtaaaacaagacttcaagatagaaggcttgttgatataacctataagtttccagatttg
gcattacttcataagcaaataaaagcaaaagaagcaatacttgacggtgaacttgtagtc
ttaaaaaacggcaagcctagttacaaaagcattatgtcaagaaagcatcagcaaaattta
ttaaaaataaatcttttaagcaagataatgcctgtaattttcataacatgggatatattg
tacttaaacggcaaacctcttgtagaattgccacttatagagagaaaagatatacttaga
aaaacagttaaagaaaacgagatcataaaaatatcagattttatatttgaacatggaaaa
atgctttttgaagagacagggaaaaaaggacttgaaggaattgttgccaaaaaagcagat
tcaaaatatttaataggaaaaaggagtaaactctggcttaagtcaaaacattttattgta
ataaatgctgttattatagggtacagaactgacaaaacagccctcatactggggctttac
gatgaggaaaataatttaataaacataggaagttgtgaatcaggcctatcccagaaggaa
ttaaaagcattctatgaagttgccaaggagataaaagccccagataattattataacttt
aaagaaaaaaatgtgcagtggttaaaacccttgctaacatgtaaagtgagatttatggaa
tggtctgaaaacatgaagatgagggcaccttcttttattcaatttgagtataacgtaaaa
ccagaagagtgcaggtttgaataa

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