KEGG   Tripterygium wilfordii (thunder duke vine): 119991996
Entry
119991996         CDS       T07256                                 
Name
(RefSeq) histone deacetylase 9-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082  ATP-dependent chromatin remodeling
twl03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119991996
   03083 Polycomb repressive complex
    119991996
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:twl03036]
    119991996
Enzymes [BR:twl01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     119991996
Chromosome and associated proteins [BR:twl03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     119991996
   HDAC complexes
    Sin3A-HDAC complex
     119991996
    BRAF-HDAC complex
     119991996
    REST complex
     119991996
    SHIP complex
     119991996
    MiDAC complex
     119991996
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     119991996
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    119991996
  Chromatin remodeling factors
   NuRD complex
    119991996
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 119991996
NCBI-ProteinID: XP_038694495
LinkDB
Position
22:11658144..11663989
AA seq 430 aa
MRSKERISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTLHLFSSDLARYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCAASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLYFPGTGDVKEVGEREGKFYAINVPLKDGIDDTSFIQLFKA
IISKVVETYQPGVVVLQCGADSLAGDRLGCFNLSIDGHAECVKFVKKFNLALLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPDNEYIKYFAPDHSLKIPSGHIENLNSKSYLSTIK
MQVLENLRYIQHAPSVQMQEVPPDFYIPDFDEDDQNPDERMNQHTQDKQIQREDEYYEGD
NDNDHHMDNS
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgctcgaaagaaagaatttcctatttctacgacggggatgttggaagcgtttacttt
ggtccaaaccaccccatgaaaccacaccggctctgtatgacccaccatctggtcctctca
tacgacctccacaagaagatggaaatttatcggccgcacaaggcatatccagttgagctt
gcccaatttcactcagcagattatgttgaatttttacatagaatcactcccgatactcta
catttgttctccagtgatttggccagatataatcttggagaagattgtcctgtcttcgat
aatttatttgaattttgccaaatatatgctggtggaacaatagatgccgcacgtagattg
aacaatcaactatgtgacattgctattaattgggctggtggattacaccatgccaagaag
tgtgcagcgtcgggcttctgttacatcaatgatctggttttagggatcttggagcttctc
aagtatcatgcccgtgttttatatattgacatagatgtgcatcatggtgatggagttgaa
gaagctttttatttcacagacagggtgatgactgttagttttcacaagtatggggattta
tactttcctggaactggtgatgttaaggaagtaggagaacgggaaggaaagttctatgcc
ataaatgtacccctcaaggatgggatagatgacactagcttcatccaacttttcaaggcg
attatctccaaggttgttgaaacctatcaaccaggtgtggtagttctccaatgtggggca
gattcacttgctggggaccgcttgggctgcttcaatctctctattgatgggcatgctgaa
tgtgtcaagtttgtgaaaaaattcaatttggccttactggttactggaggtgggggttac
acaaaagagaatgttgctcgatgctggactgttgaaacaggagtgcttttagacacagaa
cttcctaatgaaatcccagacaacgagtatataaaatattttgccccagatcactctttg
aagattccaagcggacacatagagaatttaaatagcaaatcatatcttagcacaatcaaa
atgcaagtgttggagaatcttcgctacatccaacatgctcctagcgtacagatgcaagag
gttccacctgacttttatatccctgattttgatgaagatgaccagaaccccgacgaacgc
atgaatcagcacacccaggacaagcaaatacagcgtgaagatgaatattacgagggagac
aatgataatgatcatcacatggacaattcatga

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