Tripterygium wilfordii (thunder duke vine): 120002246
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Entry
120002246 CDS
T07256
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120002246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
120002246
Membrane trafficking [BR:
twl04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
120002246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
CENP-B_dimeris
LepB_N
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
120002246
NCBI-ProteinID:
XP_038706855
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All DBs
Position
7:2196916..2206890
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AA seq
950 aa
AA seq
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MAPIPSENGVEGDDEREEDDEEEEEEEEEEEEDEEEPRLKYLRMGSSVPSLLASDAASCI
AVAERMIALGTLDGNVHILDFLGNQVKEFPAHTAAVNDLSFDIEGEYVGSCSDDGSVVIN
SLFTDEKLKFDYHRPMKAIALDPDYSKKSSRRFVAGGLAGHLYFNTKRWLGYRDQVLHSG
EGPIHAVKWRTSLIAWANDAGVKVYDAANDQRITFIERPRGSPRPELLLPHLVWQDDTLL
VIGWGTSVKIASIRANQLKGTNGTYRHVPLSSMNQVDIVASFQTSYYISGIAPFGDSLVI
LAYIPGEEDGDKEFSSMTPSRQQGNAQRPEVRILTWNNDELTTDALPVHGFEHYKAKDYS
LAHAPFSGSSYAGGQWAAGDEPSYYIVSPKDVVIVKPRDAEDHIAWLLQHGWHDKALAAV
EAGQGRSELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPV
LVPYMPTDNPRLRDTAYEVALVALATNPSFHKDLLSAVKSWPPVIYSALPVISAIYPQLN
TSSMTDSLKQALAELYVIDGQYEKAFSLYADLMKPDIFDFVEKHNLHDFIHEKVVQLMMI
DCKRAVPLFIQYRDLITPSEVVSQIMGAKNTCDTRYFLHLYLQSLFEANPHAGKDFHDMQ
VELYADYDPKMLLPFLRSSQHYTLEKAYEICVKRDLLKEQVFILGRMGNSKKALAVIINK
LGDIEEAVEFVTMQHDDELWEELIKQCLHKPEMVGMLLEHTVGNLDPLYIVNMVPNGLEI
PRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKEARRAIFLSNEVDSRVKRD
DSGTSQSIERIPSTKTVEVKSKTRGGARCSMCFDPFHIQSESVIVFFCCHSYHTTCLMDS
INTVTGNKRTGATSEEAGTEYDYQDEDEDEDDNHSDVPHLRCILCTTAVS
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggctccgattccgtcggagaacggcgtcgaaggagacgacgagagagaagaagacgac
gaagaggaggaggaggaggaggaggaggaggaagaggatgaggaggagcccaggctcaag
tacctcagaatgggaagtagcgtgccctcgctgttagcgagtgacgctgcttcgtgcatc
gctgtcgctgagcgcatgatcgcgcttgggacgctcgatggcaatgtccacatccttgac
tttctcgggaatcaggttaaagaatttccagctcatactgctgcagttaatgacctttcc
tttgatatagaaggagagtacgttggaagctgctcagatgatggatctgttgttataaac
agtctttttacagatgagaaattgaagtttgactatcaccgcccgatgaaggcaattgct
ctggacccggattactctaaaaaatcatctagaagatttgttgctggtggtttagctggt
catttatattttaatacaaagaggtggctaggctatcgtgaccaggttttgcactctggt
gaaggtccaatacatgcagtaaaatggagaactagccttatcgcttgggctaatgacgca
ggtgtgaaagtctatgatgctgccaatgatcagcgtataacatttattgaaagacctcga
ggaagccctcgccctgagcttttacttcctcacttagtttggcaggatgatactctatta
gtcattggctggggaacatctgtgaaaattgcatcaataagagcaaatcagcttaaagga
accaatgggacatatcggcatgtcccattgtccagcatgaaccaggtggatattgtggca
tcttttcaaaccagctattatatttcaggaattgctccctttggtgattctttggtcatt
ctagcatatattcctggggaagaagatggagacaaggaattcagtagcatgacgccatcg
cgacagcaggggaatgcacagagacctgaagtacgtattttaacatggaacaatgatgag
ctcacaacagatgcccttcctgttcatggcttcgagcattacaaggcaaaggactattct
cttgctcacgctcctttttcaggtagcagctatgctggtggtcaatgggcagctggtgat
gaaccgtcatactatattgtttcaccaaaagatgtagtcattgtgaagcccagggatgct
gaggatcatattgcttggcttcttcaacatggatggcatgacaaggctttagcagcagtt
gaagcaggtcaaggacggagtgaactccttgacgaggtgggttccagatacctcgatcat
ttgattgtagaaaggaaatatgctgaggctgcatctttgtgtcccaaattgttgcgagga
tctgcttcagcatgggagagatgggtttttcattttgctcatctccgtcaacttcctgta
ttggttccatacatgccgacagataaccccagactgcgtgatacagcctatgaggttgct
cttgtagcgctggctacaaacccatctttccataaggaccttttatcagctgttaaatct
tggccacctgtcatatattctgcattgcctgttatatctgccatttatcctcagctgaat
acttcatccatgactgattccctaaaacaggcactagcagagctctatgtaattgatggg
cagtatgagaaagctttttcgctctacgctgatctgatgaagccagatatttttgatttc
gtggagaagcataatttgcatgattttatacatgaaaaggttgtccaactgatgatgatc
gattgcaagcgtgcagttcctttattcattcaatacagggacctaatcactccatctgaa
gtcgtttcacaaattatgggtgcaaagaatacatgtgatacaagatatttcttgcattta
tatcttcaatcactatttgaagcaaatccacatgctggaaaggattttcacgatatgcag
gtcgaactttacgcagactatgatccaaaaatgctccttccttttcttcgtagtagccag
cattacacacttgagaaggcatatgaaatttgtgtcaaaagagatcttctgaaggagcaa
gttttcattcttggaaggatgggtaattcaaaaaaagccctggctgttatcataaataaa
ttgggcgacatagaagaggctgtggaatttgtaactatgcagcatgatgatgaactttgg
gaagaattgattaaacaatgtcttcacaaacctgagatggtagggatgttgttggagcat
actgtgggcaatcttgatcctctttacattgtgaatatggtgcccaatggcttggagata
cctcgcctcagagaccgtctagttaaaataatcactgattacaggactgaaacatctctt
agacatgggtgtaatgatattctcaaggctgatattgtaaatctcttggtcaagtactac
aaagaagctagacgagctattttcttgagcaatgaagtcgattcacgcgtgaaaagggat
gacagtggtacttctcagtcgattgagagaatacctagcacgaaaactgtggaggtcaag
tctaaaactaggggaggtgcaagatgtagcatgtgttttgatcccttccatatacaaagc
gagtcagtgattgtgtttttttgttgtcactcatatcacacaacttgtcttatggattcg
atcaatactgttactggcaacaaaaggactggagccacttccgaggaagctgggacagag
tatgactatcaggatgaagatgaggatgaagatgataatcattcagatgttcctcacttg
cgatgtatcttatgtacaactgctgttagttaa
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