Thiothrix winogradskyi: L2Y54_06335
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Entry
L2Y54_06335 CDS
T08347
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
twn
Thiothrix winogradskyi
Pathway
twn00550
Peptidoglycan biosynthesis
twn01100
Metabolic pathways
twn01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
L2Y54_06335 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L2Y54_06335 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
twn01011
]
L2Y54_06335 (mrdA)
Enzymes [BR:
twn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
L2Y54_06335 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
twn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
L2Y54_06335 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
SURF1
GGACT
Stimulus_sens_1
Motif
Other DBs
NCBI-ProteinID:
UJS25656
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All DBs
Position
1248628..1250610
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AA seq
660 aa
AA seq
DB search
MSDRPIKLERDEQHMFNVRAVVAGVFILFALLGILGRVYQLQVSDYAKYSDLSRQHYQKR
IPIPPNRGQIYDRNGVLLADSHTQYVLEVVRDNIGDENGDGKSTLADVDLFVERLGGLIP
LVEKDVRLFKTQARRFKYQPIPIRGNLTEEEQAVLAVNAPRFRGAKVVKRMERYYPLVET
ASHVIGYVGRIDARDLERVDKIEYTGTTHIGKSGVEASHEDRLHGKAGFELIEVDAHGKK
QKELGKQEPVGGQELFLGLDINLQIVAENLLKNERGAIVAMDPSNGEVLALASVPTFDPN
LFINGISQKDYSALREDPGRPLFNRALQGAYPPGSTIKPMVGVAGLIEGVITPGSRVYDP
GFFRLQGQKHAFRCWNKKGHGSVDLKYSIQQSCDTYFYDLAYRMGIDRFSAGMRQFGFGE
KTGIDLPAEASGLMPSKEWKEKRHKRSWFPGDTVNIGIGQGYWLATPLQLAHATTIMANR
GVRLKPHVLRGVRTARNQDESILKPEPFPSIEAKDNYWTLTIQGMENVMRPGGTARSSGD
GASYRIAGKTGTAQVFGLAGGKYNAKRIAKRLRDHALFVGFAPADNPKIAVAVIVENAMG
GGGTAAAPLARKLMDAYLLQQYGENMLKPAGEVVHQEPVSETPPADAEKKTPKKKKQGGE
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatagaccgattaaattagaacgcgatgagcagcacatgttcaatgtgcgggct
gtggttgcgggtgtctttattctgtttgccctgctagggattttggggagggtttaccag
ctccaagtatccgattacgccaaatattctgatctttcccgccagcattatcaaaaacgc
attcctatcccccccaatcgtggtcaaatttatgaccgcaacggcgtgctattggctgat
agccacacgcaatacgtgcttgaagtggtacgtgacaatatcggtgatgaaaatggtgac
ggtaagtcgacgttagccgatgttgatttattcgttgaacgtttggggggacttattccc
ttggtagaaaaagatgtgcgtttgttcaaaacacaggctcggcgctttaaatatcagcct
attcccattcggggcaatttaacggaagaggaacaggcggtcttggcggtgaatgccccc
cgctttcgtggtgccaaggtggtaaagcgcatggagcgttactatcctttggtggaaacg
gcgagtcatgtgattgggtatgtggggcgtattgatgcccgcgatctggagcgtgtcgac
aagattgagtacaccggtactacccatattggtaagtctggtgtggaagcttcccatgaa
gaccgtttgcacgggaaggcgggttttgagctgattgaggtggatgcgcatggcaaaaag
cagaaagaactcggtaagcaagaaccagtaggcgggcaggagttgtttctgggcttggat
attaatctgcaaattgttgcggaaaatttattgaaaaatgaacgtggggcgattgtggcg
atggatccgagtaacggtgaagtgctggctttggcgagtgtgccgacgtttgacccgaat
ttatttattaatggtatctcgcagaaagattacagcgccttgcgcgaagatcctggtcgt
cctttattcaatcgtgccttgcagggagcatacccgccgggttcgacgattaagccaatg
gtaggggtggcaggcttgattgagggtgttattacgccgggtagccgggtgtatgaccct
ggatttttccgtttgcaaggtcaaaaacatgcgtttcggtgttggaataaaaaagggcat
ggttcggttgatttgaagtattcgatccagcagtcttgcgatacctacttttatgatttg
gcgtatcgcatgggaattgatcgtttctcagcagggatgcggcagtttggttttggtgaa
aaaactggcattgacttgccagcagaggcatcaggcttaatgccaagcaaggaatggaag
gaaaagcggcataagcgcagttggtttcccggtgataccgtcaatattggtatcgggcag
gggtattggctggcaacacccctgcaattggctcatgccaccaccattatggcgaaccgg
ggggtgcgcttgaagccacatgtcttgcgtggggtgcgtactgcacgtaatcaagatgag
agtattcttaagccggagccgtttccaagtattgaagcgaaggataattattggacattg
accattcagggaatggaaaacgtaatgcgcccaggtggtactgcgcggtcatcgggtgat
ggggcaagttaccgcattgcgggtaagacaggtacggcacaggtgttcggtttggcgggt
gggaaatacaatgcgaagcgcattgctaagcgtttgcgtgaccatgcgttgtttgtgggg
tttgcgcctgcggataaccctaaaattgcggtggcagtgattgtggagaatgcgatgggc
ggtggtgggactgccgctgcaccgttagcacgcaagcttatggatgcgtatttacttcag
cagtacggtgagaatatgttgaaaccagccggtgaagtggtgcaccaagagcctgtttca
gagacaccgcccgcagacgctgagaaaaaaacaccgaaaaagaaaaaacaggggggtgag
tag
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