Tropheryma whipplei TW08/27: TW245
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Entry
TW245 CDS
T00117
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tws
Tropheryma whipplei TW08/27
Pathway
tws03420
Nucleotide excision repair
tws03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TW245
03430 Mismatch repair
TW245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tws03400
]
TW245
Enzymes [BR:
tws01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TW245
DNA repair and recombination proteins [BR:
tws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TW245
MMR (mismatch excision repair)
Other MMR factors
TW245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
CAD66921
LinkDB
All DBs
Position
272079..273836
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AA seq
585 aa
AA seq
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MTIDVFSGLSDQQCDAVRTLRGPVKIIAGAGSGKTLTITRRIVNGIISNEYDSGHVMALS
FTRRASMQLRSRLVEHGVKGVYSGTFHSAALSQLRFFWETFHGKPPRQIIRDKVNLLRDA
ARGINFSFSDESLCQVASEIEWAKQNGYDLSGYDKCNHRISGMSASQARTLMLAYEDVKN
NRRLIDFEDILSLTVGMLSVQPRAVARVRDRFRVFLIDEFQDVSPLQFELLRIWLGRRRD
ICVVGDPNQCIYSFAGAKRDYLVKFADYFPGAREVFLSRNYRSRPEIVCLSRHIIDSHSP
DIGLYQPTEGISRNYADTKTATPAQDMRVNAGNRAKCHCTAPPGTKGAVRCGNSDLGYRE
TPIRWHTFENQIQEMHFIAQSLKNISQSCAVLYRTAIQGERLAKYLHTSGIIYRSQESRL
FHETDVAQIACKRVIEKTIECNVRVVDLVDSVVSGIFPRKPDALTGEYDGWVALQALRLC
ARRFNGNASSFATYLLEMQRHRREPEMPFATLATLHSTKGLEWDTVYIIGVNEGLIPHHT
GDEDEEKRLFYVGVTRARKNIVFSSTRTPSRYLTELCLSPISAKE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
ttgacaattgatgttttttcgggacttagcgaccaacagtgtgatgctgtccgtaccctg
agggggcctgtaaaaataattgccggcgccggaagtggcaaaacactgacaattacaaga
agaatagtcaatggcattatctccaatgagtatgattccgggcatgttatggctttgagt
ttcactcgccgcgcgagcatgcaactcaggagtcgccttgtagagcacggcgttaaaggg
gtttattcaggcacttttcacagcgcggcactttcacagctcaggtttttttgggagacc
tttcacggaaagcctccaagacagataattcgcgataaggtgaatttactgcgggacgca
gcacgaggaataaactttagcttttcggatgagtcattgtgtcaggttgcttcggaaata
gaatgggcaaaacaaaacggctacgacttgagtggatacgataagtgcaatcacagaatt
tctggtatgagtgccagtcaggcgcgcactctcatgcttgcttatgaggatgtaaagaac
aatagaaggctaatcgactttgaggatatactttcgctcacagttggcatgctgtctgtt
cagccgagagccgttgctcgtgtgcgagacaggtttagggtatttttgattgatgaattt
caggatgtgtcacccctacaatttgagctcctgcgaatttggcttgggcgcaggcgtgat
atttgtgttgtcggagatcctaatcagtgtatatattcgtttgcaggggcaaaaagggat
tatcttgtcaaatttgccgactattttccgggcgcgcgagaggtttttcttagccgtaat
tacagatctcgtccggaaatagtgtgtttatctaggcacattattgactctcactcaccg
gatatcggactgtaccagcccaccgagggtatctctcgcaattatgccgatacaaaaacg
gctactcctgctcaggatatgcgggtaaatgccggaaatagagcgaaatgtcattgcacg
gcaccccctggcaccaaaggcgcggtgagatgtggtaattccgatttgggttatcgtgaa
acccctattcgttggcatacttttgaaaaccagattcaggaaatgcattttattgctcag
agtctgaagaatatttcgcagagctgtgctgtgctctacagaacggcaattcagggcgag
cggttggcaaaatatttacacacatcaggaataatttatagaagccaagaaagccggctg
tttcatgaaactgatgttgcacagattgcctgcaagcgggttattgaaaagacgattgaa
tgtaacgtcagggtggttgatttggttgatagtgttgtgtctggaatattcccgcgcaag
ccagatgcactaacaggcgagtacgatggttgggttgcccttcaggcattgcgattgtgc
gctaggcgtttcaatggcaatgcttcgtcttttgccacatatttgctcgaaatgcagcgg
cataggcgtgagcctgaaatgcccttcgcaaccctcgcaaccttacattcaacaaagggt
cttgagtgggacactgtatacataatcggtgtcaacgaaggtctaattccacatcacacc
ggtgacgaagatgaggaaaaacgcctattttatgtgggcgttacccgcgcgagaaaaaac
attgtattcagcagcacacgcactcccagtaggtatttaactgaattgtgcttatcacct
atatctgccaaggaatag
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