Ursus arctos horribilis (North American brown bear): 113251539
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Entry
113251539 CDS
T05909
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
uah
Ursus arctos horribilis (North American brown bear)
Pathway
uah04151
PI3K-Akt signaling pathway
uah04510
Focal adhesion
uah04512
ECM-receptor interaction
uah04820
Cytoskeleton in muscle cells
uah04926
Relaxin signaling pathway
uah04933
AGE-RAGE signaling pathway in diabetic complications
uah04974
Protein digestion and absorption
uah05146
Amoebiasis
uah05165
Human papillomavirus infection
uah05200
Pathways in cancer
uah05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
113251539 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113251539 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113251539 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113251539 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
113251539 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
113251539 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
113251539 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
113251539 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
113251539 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
113251539 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
113251539 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
uah04147
]
113251539 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
uah00536
]
113251539 (COL4A1)
Exosome [BR:
uah04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113251539 (COL4A1)
Glycosaminoglycan binding proteins [BR:
uah00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113251539 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113251539
NCBI-ProteinID:
XP_026349380
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MGPRLGVWLLLLPAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPHGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGEPGPLGPPGLPGFAGNPGPPGLPGMKGDPGEIIGHVPGTLLKGERGFPGP
PGTPGSPGLPGLQGPVGPPGFAGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGLGEKGEPGKPGPRGKPGKDGEKGEKGS
PGFPGDAGYPGLPGREGFKGDKGEAGPPGPPGIAIGPGPSGEKGERGYPGTPGLRGEPGP
KGFPGLQGQPGPPGFPVPGQAGAPGFPGERGEKGDQGFPGTSLPGPSGRDGLPGPPGPPG
PPGQPGHTNGIVECQPGPPGDQGPPGIPGQPGLTGEVGEKGQKGESCLICDTSGLRGPPG
PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGSPGLMGQPGAKGEPGEIYFDARLK
GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDI
GPPGPPGFGPIGPVGDKGQAGFPGTPGSPGQPGPKGEAGKAVPLPGPPGTQGLPGSPGFP
GPQGDRGFPGTPGRPGLPGEKGTIGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNG
LPGNPGVPGQKGEPGVGLPGLKGLPGLPGVPGTPGEKGNIGGPGVPGEHGAIGPPGLQGI
RGDPGPPGLQGPKGAPGAPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG
PKGDKGSQGLPGLTGQSGHPGLPGQQGTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPG
LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG
PTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGPQGVPGLQGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGITGFPGSPGE
KGEKGSAGIPGVPGSPGPKGSPGTVGYPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGK
PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGEKGSKGDVGFPGQAGSP
GIPGSKGEQGFMGPPGPQGQPGLPGTPGHAVEGPKGDRGPQGQPGLPGLPGPMGPAGLPG
LDGLKGDKGNPGWPGAPGAPGPKGEPGFQGLPGIGGSPGITGSKGDMGPPGVPGFQGQKG
LPGLQGTKGDQGDQGFPGSKGLPGPPGPPGPYDIIKGEPGLPGPEGPAGLKGLPGPPGPK
GQQGVTGSVGLPGPPGSPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcggcgtctggctgctgctgctgcctgccgccctcctgctccacgag
gagcgcagccgggccgctgcaaagggtggttgtgctggctctggctgcgggaagtgtgac
tgccatggagtgaagggacagaagggcgagagaggcctcccagggttgcaaggtgtcatc
gggtttcccgggatgcaaggacctgaggggccccacgggccaccaggacaaaagggtgac
actggagaacccgggctgcctggaacgaaggggacaagaggacccccaggagcatcgggt
taccctggaaacccaggactgcctggtattcctggccaagacggtccccccggtcctcca
ggaatccccggatgcaatggaacaaagggcgagccagggcctctggggcccccgggttta
cctggattcgccggaaatcctggaccgccaggattaccaggaatgaagggggatccaggt
gaaatcattggccatgtgcctgggaccctgttgaaaggtgaaagaggatttcctggaccc
ccaggaacaccaggctcgccaggactgccgggcctgcaaggtccggttggccctccagga
tttgccggaccaccgggtcctccaggccctcctggccctccaggcgaaaaggggcaaatg
ggcttaagttttcaagggccaaaaggcgacaagggtgaccaaggcgtcagtgggcctccc
ggagtgccaggacaagctcaagttcaagagaaaggagactttgccactaaaggagagaag
ggtcaaaaaggtgaacctggatttcagggaatgccggggctcggagagaaaggggagccc
ggaaaaccagggccccgaggaaaacctggaaaagatggcgaaaaaggagagaaagggagt
ccgggctttccaggtgacgcggggtacccgggactgccaggccgcgaaggtttcaaggga
gacaaaggtgaagcaggtcctccaggcccacctggaattgcaatcggcccaggaccctct
ggagaaaaaggagagcgggggtacccgggcaccccagggttgagaggagagccaggcccc
aaaggtttcccaggattacaaggccagccaggccctccaggctttccagtaccagggcag
gctggtgctcctggcttccctggtgaaagaggcgagaaaggtgaccaagggtttccaggc
acatctttgccaggaccaagtggaagggatgggctccctggcccccctgggcctcctggg
ccccctggacagccgggccacacaaatggaattgtggaatgccagcctggaccgccaggg
gatcagggtccccccggaataccggggcagccagggctgacgggagaggttggagaaaaa
ggtcagaaaggcgagagctgcctcatctgtgacacatcgggactgcgtgggcctccaggg
ccgcagggccccccgggagaaataggtttcccaggacagccaggggccaagggcgacaga
ggcttacctggcagagatggtctggaaggattgcctggcccgcaaggctcaccagggctg
atgggccagccaggagccaagggagagcctggtgagatttacttcgacgcacggctcaaa
ggagacaaaggagacccaggctttccaggacagcccgggatgccaggcagagcagggtct
cctgggagagatggccatccgggtctgcccggccccaaaggctccccgggttcagtagga
ttgaaaggagagcgtggaccccccgggggagtcggattccccggcagtcgcggtgacatc
ggccctcctgggcctccagggtttggccctattggccccgttggtgacaaaggacaagcg
ggttttccagggacccctggatccccaggccagccaggtcccaagggtgaagcaggaaaa
gccgtgcccctacctggtccccctggaacacaaggacttccgggatccccaggtttcccg
gggccgcaaggtgaccgaggttttcctggaaccccaggaaggccgggcctgccaggagag
aagggcactattggccagcccggaatcggatttccagggccccctggccccaaaggtgtt
gatggcttacccggagacgtgggacctcctggcagtccaggccgcccgggatttaatggc
ttacctggcaacccaggtgtgcctggccaaaagggagagcccggagttggtctaccagga
ctcaaaggattgccaggtcttcctggcgttcctggcacacctggggagaaggggaacatc
gggggaccaggtgttccgggagagcatggtgctattggccccccaggccttcagggaatc
agaggtgacccaggacctcctggattacaaggtcccaaaggagctccaggagctcctgga
attggcccccccggagcgatgggcccccctggaggacagggaccacccgggtcctcaggc
cctcccggagtgaaaggagagaagggcttccccggatttccaggcctggacatgccaggt
cccaaaggagataaagggtcccaagggctgcctggcctgacgggacagtcggggcaccct
ggtcttcctggacagcagggcacacctggggttcctgggtttccaggtcccaagggagag
atgggcgtcatggggaccccagggcagcctggctcaccgggaccagcgggcctgccagga
ttaccaggagaaaaaggggaccacggcttcccgggctcctcagggcccaggggagacccc
ggcttcaagggggacaaaggagacgtgggtctccctggcaagcctggctccatggataag
gtggacatgggcagcatgaagggtcagaagggagaccaaggagagaaaggacaaattgga
ccgactggtgataaaggatcccggggagatcctggaaccccaggagtgcctggaaaggat
ggccaggcgggacatcctgggcagccaggacctaaaggtgacccaggcataggtggaacc
ccgggtgccccaggactccctggacccaaaggatcggttggtggaatgggcctgccaggg
acacctggagaaaaaggtgtgcctggaatccccggcccgcagggcgtccctggcttacag
ggggagaaaggagcaaaaggagagaaagggcaggcgggcctacctggcattggaattccg
ggccgtcccggggacaagggagatcaagggatcacaggctttccggggagtcctggagag
aagggagaaaaaggaagtgctggcatcccaggggtccctggctccccaggccccaaagga
tcaccggggactgttggctatccaggaagccccgggttgcctggagaaaaaggtgacaaa
ggtctcccgggatcggatggcattcccggcatcaaaggagaagcaggtcttcctgggaag
cctggccccacgggcccagccggccagaaaggggagcccggcagtgacggaatcccaggg
tcggcgggagagaagggtgaaccaggtctgcccggaagaggattcccagggtttccaggg
gccaaaggagagaaaggttcaaagggcgacgtgggtttcccgggacaagccggcagtcca
ggcatccccggatccaaaggagagcaaggattcatgggtcccccggggccgcaaggacag
ccgggcttacctggaactccaggccatgctgtggaggggcccaaaggagaccggggccca
cagggtcaacctggcctaccagggcttccgggacctatggggcctgcggggctccctggg
ctcgatggactcaaaggtgacaaaggaaacccaggttggccgggggctcctggagctcca
gggcccaagggagagccaggattccagggcctgcctgggattggtggctcgccagggatc
acgggctccaagggtgatatggggcctccaggagtgccgggatttcaaggtcagaaaggc
ctccctggcctgcagggaacgaagggggatcaaggtgaccagggcttccctggaagtaaa
ggccttcccggtcccccgggtcccccaggaccctacgacatcatcaaaggggagccagga
cttcctggtcctgagggtcccgcaggtctgaaggggctcccaggacctccaggccccaaa
ggacagcaaggtgtgacgggatctgtgggcttacctggaccgccaggtagtcccggtttt
gacggcgccccgggccagaaaggagagacgggacccttcggccctcctggtccacgaggg
tttccgggcccgccaggccctgatgggctgccaggatccatgggtcccccaggcaccccg
tctgttgatcatggcttccttgtgaccaggcacagtcaaacaacggatgacccacaatgt
cctcctgggaccaaaattctttaccacgggtactccttgctctacgtgcaaggcaacgaa
cgagcccacggccaggacttgggcacggccgggagctgcctgcgcaagttcagtacgatg
cccttcctcttctgcaacatcaacaacgtgtgtaacttcgcctcccgaaacgactactcc
tactggctgtccacacccgagcccatgcccatgtccatggcgcccatcgccggggacaat
atcagaccatttattagcaggtgcgcggtgtgtgaggcgccagccatggtgatggccgtg
cacagccagaccattcagatcccgcagtgccccagcggctggtcctccctctggattggc
tattccttcgtgatgcacaccagtgccggtgctgaaggttctggccaagccctcgcgtcc
cccgggtcttgtctggaagagttcaggagcgcgccattcatcgagtgccatggccgtggg
acttgcaactactatgcaaacgcttacagcttttggcttgccaccatcgagagaagcgag
atgttcaagaagcccacgccgtccaccttgaaggccggggagctgcgcacgcacgtcagt
cgctgtcaagtctgtatgagaagaacgtaa
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integrated database retrieval system
